Striatum Gene Expression Correlates for NX_ADIST_3 measured in BXD RI Females obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The NX_ADIST_3 measures Naloxone induced Morphine Withdrawal TOTAL vertical activity counts in 15 minutes under the domain Morphine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Average rotarod training latency Chr# 5 rs13478110 (9741228) with right flanking marker rs13478092(3595407) and left marker rs3718776 (150393227). This was mapped in 300 + (b6x129)F2 mice.
QTL associated with body weight females and males day 10. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (126842654)
QTL associated with circulating hormone level QTL 11. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (125309605)
QTL associated with cocaine induced activation 7. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (146673682)
QTL associated with correlation in cytokine production 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (132603914)
Authors:
Kosarov M, Havelkov H, Krulov M, Demant P, Lipoldov M
QTL associated with dextran sodium sulfate induced colitis QTL1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (132580851)
QTL associated with methamphetamine response QTL 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (125309605)
Authors:
Palmer AA, Verbitsky M, Suresh R, Kamens HM, Reed CL, Li N, Burkhart-Kasch S, McKinnon CS, Belknap JK, Gilliam TC, Phillips TJ
QTL associated with nitrous oxide antinociception 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (146673682)
QTL associated with postnatal body weight growth 13. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (142623656)
QTL associated with Theiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 7. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (130061274)
Authors:
Butterfield RJ, Roper RJ, Rhein DM, Melvold RW, Haynes L, Ma RZ, Doerge RW, Teuscher C
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Pancreatic cancer. The EFO term pancreatic carcinoma was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
BM Wolpin, C Rizzato, P Kraft, C Kooperberg, GM Petersen, Z Wang, AA Arslan, L Beane-Freeman, PM Bracci, J Buring, F Canzian, EJ Duell, S Gallinger, GG Giles, GE Goodman, PJ Goodman, EJ Jacobs, A Kamineni, AP Klein, LN Kolonel, MH Kulke, D Li, N Malats, SH Olson, HA Risch, HD Sesso, K Visvanathan, E White, W Zheng, CC Abnet, D Albanes, G Andreotti, MA Austin, R Barfield, D Basso, SI Berndt, MC Boutron-Ruault, M Brotzman, MW Büchler, HB Bueno-de-Mesquita, P Bugert, L Burdette, D Campa, NE Caporaso, G Capurso, C Chung, M Cotterchio, E Costello, J Elena, N Funel, JM Gaziano, NA Giese, EL Giovannucci, M Goggins, MJ Gorman, M Gross, CA Haiman, M Hassan, KJ Helzlsouer, BE Henderson, EA Holly, N Hu, DJ Hunter, F Innocenti, M Jenab, R Kaaks, TJ Key, KT Khaw, EA Klein, M Kogevinas, V Krogh, J Kupcinskas, RC Kurtz, A LaCroix, MT Landi, S Landi, L Le Marchand, A Mambrini, S Mannisto, RL Milne, Y Nakamura, AL Oberg, K Owzar, AV Patel, PH Peeters, U Peters, R Pezzilli, A Piepoli, M Porta, FX Real, E Riboli, N Rothman, A Scarpa, XO Shu, DT Silverman, P Soucek, M Sund, R Talar-Wojnarowska, PR Taylor, GE Theodoropoulos, M Thornquist, A Tjønneland, GS Tobias, D Trichopoulos, P Vodicka, J Wactawski-Wende, N Wentzensen, C Wu, H Yu, K Yu, A Zeleniuch-Jacquotte, R Hoover, P Hartge, C Fuchs, SJ Chanock, RS Stolzenberg-Solomon, LT Amundadottir
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