List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Fasting plasma glucose. The EFO term fasting blood glucose measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
WM Chen, MR Erdos, AU Jackson, R Saxena, S Sanna, KD Silver, NJ Timpson, T Hansen, M Orrù, M Grazia Piras, LL Bonnycastle, CJ Willer, V Lyssenko, H Shen, J Kuusisto, S Ebrahim, N Sestu, WL Duren, MC Spada, HM Stringham, LJ Scott, N Olla, AJ Swift, S Najjar, BD Mitchell, DA Lawlor, GD Smith, Y Ben-Shlomo, G Andersen, K Borch-Johnsen, T Jørgensen, J Saramies, TT Valle, TA Buchanan, AR Shuldiner, E Lakatta, RN Bergman, M Uda, J Tuomilehto, O Pedersen, A Cao, L Groop, KL Mohlke, M Laakso, D Schlessinger, FS Collins, D Altshuler, GR Abecasis, M Boehnke, A Scuteri, RM Watanabe
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Fasting plasma glucose. The EFO term fasting blood glucose measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
N Bouatia-Naji, G Rocheleau, L Van Lommel, K Lemaire, F Schuit, C Cavalcanti-Proença, M Marchand, AL Hartikainen, U Sovio, F De Graeve, J Rung, M Vaxillaire, J Tichet, M Marre, B Balkau, J Weill, P Elliott, MR Jarvelin, D Meyre, C Polychronakos, C Dina, R Sladek, P Froguel
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Glycated hemoglobin levels. The EFO term A1C measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Glycated hemoglobin levels. The EFO term A1C measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
P Chen, F Takeuchi, JY Lee, H Li, JY Wu, J Liang, J Long, Y Tabara, MO Goodarzi, MA Pereira, YJ Kim, MJ Go, DO Stram, E Vithana, CC Khor, J Liu, J Liao, X Ye, Y Wang, L Lu, TL Young, J Lee, AC Thai, CY Cheng, RM van Dam, Y Friedlander, CK Heng, WP Koh, CH Chen, LC Chang, WH Pan, Q Qi, M Isono, W Zheng, Q Cai, Y Gao, K Yamamoto, K Ohnaka, R Takayanagi, Y Kita, H Ueshima, CA Hsiung, J Cui, WH Sheu, JI Rotter, YD Chen, C Hsu, Y Okada, M Kubo, A Takahashi, T Tanaka, FJ van Rooij, SK Ganesh, J Huang, T Huang, J Yuan, JY Hwang, MD Gross, TL Assimes, T Miki, XO Shu, L Qi, YT Chen, X Lin, T Aung, TY Wong, YY Teo, BJ Kim, N Kato, ES Tai
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Fasting plasma glucose. The EFO term fasting blood glucose measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
LJ Rasmussen-Torvik, X Guo, DW Bowden, AG Bertoni, MM Sale, J Yao, DA Bluemke, MO Goodarzi, YI Chen, D Vaidya, LJ Raffel, GJ Papanicolaou, JB Meigs, JS Pankow
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Fasting plasma glucose. The EFO term fasting blood glucose measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
I Prokopenko, C Langenberg, JC Florez, R Saxena, N Soranzo, G Thorleifsson, RJ Loos, AK Manning, AU Jackson, Y Aulchenko, SC Potter, MR Erdos, S Sanna, JJ Hottenga, E Wheeler, M Kaakinen, V Lyssenko, WM Chen, K Ahmadi, JS Beckmann, RN Bergman, M Bochud, LL Bonnycastle, TA Buchanan, A Cao, A Cervino, L Coin, FS Collins, L Crisponi, EJ de Geus, A Dehghan, P Deloukas, AS Doney, P Elliott, N Freimer, V Gateva, C Herder, A Hofman, TE Hughes, S Hunt, T Illig, M Inouye, B Isomaa, T Johnson, A Kong, M Krestyaninova, J Kuusisto, M Laakso, N Lim, U Lindblad, CM Lindgren, OT McCann, KL Mohlke, AD Morris, S Naitza, M Orrù, CN Palmer, A Pouta, J Randall, W Rathmann, J Saramies, P Scheet, LJ Scott, A Scuteri, S Sharp, E Sijbrands, JH Smit, K Song, V Steinthorsdottir, HM Stringham, T Tuomi, J Tuomilehto, AG Uitterlinden, BF Voight, D Waterworth, HE Wichmann, G Willemsen, JC Witteman, X Yuan, JH Zhao, E Zeggini, D Schlessinger, M Sandhu, DI Boomsma, M Uda, TD Spector, BW Penninx, D Altshuler, P Vollenweider, MR Jarvelin, E Lakatta, G Waeber, CS Fox, L Peltonen, LC Groop, V Mooser, LA Cupples, U Thorsteinsdottir, M Boehnke, I Barroso, C Van Duijn, J Dupuis, RM Watanabe, K Stefansson, MI McCarthy, NJ Wareham, JB Meigs, GR Abecasis
Cerebellum Gene Expression Correlates for C1VCOUNT30 measured in BXD RI Females obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The C1VCOUNT30 measures Open Field rears 15-30 min post cocaine under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for C1VCOUNT45 measured in BXD RI Males obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The C1VCOUNT45 measures Open Field rears 30-45 min post cocaine under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for C1VCOUNT60 measured in BXD RI Females obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The C1VCOUNT60 measures Open Field rears 45-60 min post cocaine under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for C1VCOUNT60 measured in BXD RI Males obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The C1VCOUNT60 measures Open Field rears 45-60 min post cocaine under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for C2VCOUNT15 measured in BXD RI Females obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The C2VCOUNT15 measures Open Field rears 0-15 min post 2nd cocaine under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for C2VCOUNT30 measured in BXD RI Females obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The C2VCOUNT30 measures Open Field rears 15-30 min post 2nd cocaine under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for C2VCOUNT45 measured in BXD RI Females obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The C2VCOUNT45 measures Open Field rears 30-45 min post 2nd cocaine under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for LOC_CHCL_VCOUNT_3 measured in BXD RI Males obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The LOC_CHCL_VCOUNT_3 measures Cocaine Open Field TOTAL rears under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for SEN_CHCL_VCOUNT_4 measured in BXD RI Females obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The SEN_CHCL_VCOUNT_4 measures Cocaine Sensitization - TOTAL rears under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for SEN_CHCL_VCOUNT_4 measured in BXD RI Males obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The SEN_CHCL_VCOUNT_4 measures Cocaine Sensitization - TOTAL rears under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for SVCOUNT30 measured in BXD RI Females & Males obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The SVCOUNT30 measures Open Field rears 15-30 min post saline under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for SVCOUNT45 measured in BXD RI Males obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The SVCOUNT45 measures Open Field Rears 30-45 min post saline under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Renthal W, Kumar A, Xiao G, Wilkinson M, Covington HE 3rd, Maze I, Sikder D, Robison AJ, LaPlant Q, Dietz DM, Russo SJ, Vialou V, Chakravarty S, Kodadek TJ, Stack A, Kabbaj M, Nestler EJ
QTL for ethanol consumption on Chr2 at D2Mit7 (47.24 Mbp , Build 37)
Description:
ethanol consumption spans 22.24 - 72.24 Mbp (NCBI Build 37) on Chr2. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
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