445 predicted targets of miR-181, which is one of the miRNAs shown to be upregulated in female humans with cocaine use disorder. miRNA expression was determined via qPCR, and predicted targets were determined via gene ontology (GO) analysis. Values presented are "1" for presence. Data taken from Supplementary material 2.
The total transcriptome including genes that are differentially expressed in cocaine addicts compared to control subjects. Post-mortem brain samples were collected from the dorsolateral prefrontal cortex (dlPFC) of the cocaine addict group and the control group. To assess gene expression, RNA-seq was performed. Data taken from Supplementary Table 2. Values presented are k.diff values. Data available from GEO with accession number GSE99349."
Authors:
Efrain A Ribeiro, Joseph R Scarpa, Susanna P Garamszegi, Andrew Kasarskis, Deborah C Mash, Eric J Nestler
Differentially expressed in the Nucleus accumbens following 24 hr continuous 9.5g/kg/day alcohol drinking vs. water drinking in alcohol preferring rats. Estimated BAC in the alcohol exposed group was > 85mg%. The 406 significanlty different probe sets represent 374 uniquely named genes, with most gene expression differences in the range of 1.1-1.3 fold.
Genes associated with Homo sapiens that interact with the MeSH term 'Aflatoxin B1' (D016604). Incorporates data from 5 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'propionaldehyde' (C005556). Incorporates data from 1 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
QTL associated with circulating hormone level QTL 10. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (53317604)
QTL associated with experimental severe malaria resistance. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (56130259)
Authors:
Nagayasu E, Nagakura K, Akaki M, Tamiya G, Makino S, Nakano Y, Kimura M, Aikawa M
QTL associated with leishmaniasis resistance 13. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (45135967)
Authors:
Havelkov H, Badalov J, Svobodov M, Vojtkov J, Kurey I, Vladimirov V, Demant P, Lipoldov M
QTL associated with lung squamous cell carcinoma 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (55539802)
Authors:
Wang Y, Zhang Z, Yan Y, Lemon WJ, LaRegina M, Morrison C, Lubet R, You M
QTL associated with lung tumor shape-determining 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (39646515)
QTL associated with "macronutrient intake, fat 2". This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (53220218)
Authors:
Smith Richards BK, Belton BN, Poole AC, Mancuso JJ, Churchill GA, Li R, Volaufova J, Zuberi A, York B
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