List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Birth weight. The EFO term birth weight was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
RM Freathy, DO Mook-Kanamori, U Sovio, I Prokopenko, NJ Timpson, DJ Berry, NM Warrington, E Widen, JJ Hottenga, M Kaakinen, LA Lange, JP Bradfield, M Kerkhof, JA Marsh, R Mägi, CM Chen, HN Lyon, M Kirin, LS Adair, YS Aulchenko, AJ Bennett, JB Borja, N Bouatia-Naji, P Charoen, LJ Coin, DL Cousminer, EJ de Geus, P Deloukas, P Elliott, DM Evans, P Froguel, B Glaser, CJ Groves, AL Hartikainen, N Hassanali, JN Hirschhorn, A Hofman, JM Holly, E Hyppönen, S Kanoni, BA Knight, J Laitinen, CM Lindgren, WL McArdle, PF O'Reilly, CE Pennell, DS Postma, A Pouta, A Ramasamy, NW Rayner, SM Ring, F Rivadeneira, BM Shields, DP Strachan, I Surakka, A Taanila, C Tiesler, AG Uitterlinden, CM van Duijn, AH Wijga, G Willemsen, H Zhang, J Zhao, JF Wilson, EA Steegers, AT Hattersley, JG Eriksson, L Peltonen, KL Mohlke, SF Grant, H Hakonarson, GH Koppelman, GV Dedoussis, J Heinrich, MW Gillman, LJ Palmer, TM Frayling, DI Boomsma, G Davey Smith, C Power, VW Jaddoe, MR Jarvelin, MI McCarthy
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Carotid artery intima media thickness (sex interaction). The EFO term carotid artery intima media thickness was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
C Dong, D Della-Morte, A Beecham, L Wang, D Cabral, SH Blanton, RL Sacco, T Rundek
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Anthropometric traits in newborns. The EFO term neonate, birth weight was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
M Urbanek, MG Hayes, LL Armstrong, J Morrison, LP Lowe, SE Badon, D Scheftner, A Pluzhnikov, D Levine, CC Laurie, C McHugh, CM Ackerman, DB Mirel, KF Doheny, C Guo, DM Scholtens, AR Dyer, BE Metzger, TE Reddy, NJ Cox, WL Lowe
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Anthropometric traits in newborns. The EFO term neonate, fat body mass was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
M Urbanek, MG Hayes, LL Armstrong, J Morrison, LP Lowe, SE Badon, D Scheftner, A Pluzhnikov, D Levine, CC Laurie, C McHugh, CM Ackerman, DB Mirel, KF Doheny, C Guo, DM Scholtens, AR Dyer, BE Metzger, TE Reddy, NJ Cox, WL Lowe
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Anthropometric traits in newborns. The EFO term neonate, sum of skinfolds was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
M Urbanek, MG Hayes, LL Armstrong, J Morrison, LP Lowe, SE Badon, D Scheftner, A Pluzhnikov, D Levine, CC Laurie, C McHugh, CM Ackerman, DB Mirel, KF Doheny, C Guo, DM Scholtens, AR Dyer, BE Metzger, TE Reddy, NJ Cox, WL Lowe
Cerebellum Gene Expression Correlates for ACTI20_ETHA measured in BXD RI Males obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The ACTI20_ETHA measures Distance traveled (cm) during the fourth five minute bin after ethanol under the domain Ethanol. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for BEC measured in BXD RI Males obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The BEC measures blood ethanol concentration in mg/dl under the domain Ethanol. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for OF_REAR_0_5 measured in BXD RI Males obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The OF_REAR_0_5 measures Open Field - Total rears 0-5 minutes under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
QTL for ethanol conditioned taste aversion on Chr3 at D3Mc1 (47.70 Mbp , Build 37)
Description:
ethanol conditioned taste aversion spans 22.70 - 72.70 Mbp (NCBI Build 37) on Chr3. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
QTL for ethanol withdrawal on Chr3 at D3Mc1 (47.70 Mbp , Build 37)
Description:
ethanol withdrawal spans 22.70 - 72.70 Mbp (NCBI Build 37) on Chr3. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
Genes associated with Homo sapiens that interact with the MeSH term 'Aflatoxin B1' (D016604). Incorporates data from 5 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'propionaldehyde' (C005556). Incorporates data from 1 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
loss of righting reflex assay. 155,101,972 - 247,295,816 involved strains HAS.LAS-(D2Rat38-D2Rat69). intercross allele responsible: LAS allele was dominant inducing agent: intraperitoneal administration of alcohol 2.25 g/kg measurement method: after alcohol administration, animals were placed on their back and the time at when they no longer right themselves was recorded; the lapse time at which they could right themselves was taken as loss of righting reflex (LORR) Likelihood Ratio: 16.3 software package used: Map Manager QTX duration of loss of righting reflex was less in female
Authors:
Radcliffe RA, Bludeau P, Asperi W, Fay T, Deng XS, Erwin VG, Deitrich RA
QTL associated with arthropathy in MRL and DBA/1 mice 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (57246565)
Authors:
Oishi H, Miyazaki T, Mizuki S, Kamogawa J, Lu LM, Tsubaki T, Arita N, Ono M, Yamamoto H, Nose M
QTL associated with circulating hormone level QTL 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (56600603)
Authors:
Harper JM, Galecki AT, Burke DT, Pinkosky SL, Miller RA
QTL associated with collagen induced arthritis QTL 5. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (82943273)
Authors:
Johannesson M, Olsson LM, Lindqvist AK, Mller S, Koczan D, Wester-Rosenlf L, Thiesen HJ, Ibrahim S, Holmdahl R
QTL associated with epistatic circling A C57L/J 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (82366294)
Authors:
Cryns K, Van Spaendonck MP, Flothmann K, van Alphen AM, Van De Heyning PH, Timmermans JP, De Zeeuw CI, Van Camp G
QTL associated with insulin dependent diabetes susceptibility 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (60270627)
Authors:
Moritoki Y, Tsuda M, Tsuneyama K, Zhang W, Yoshida K, Lian ZX, Yang GX, Ridgway WM, Wicker LS, Ansari AA, Gershwin ME
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