List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Serum parathyroid hormone levels. The EFO term parathyroid hormone measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
C Robinson-Cohen, PL Lutsey, ME Kleber, CM Nielson, BD Mitchell, JC Bis, KM Eny, L Portas, J Eriksson, M Lorentzon, DL Koller, Y Milaneschi, A Teumer, S Pilz, M Nethander, E Selvin, W Tang, LC Weng, HS Wong, D Lai, M Peacock, A Hannemann, U Völker, G Homuth, M Nauk, F Murgia, JW Pattee, E Orwoll, JM Zmuda, JA Riancho, M Wolf, F Williams, B Penninx, MJ Econs, KA Ryan, C Ohlsson, AD Paterson, BM Psaty, DS Siscovick, JI Rotter, M Pirastu, E Streeten, W März, C Fox, J Coresh, H Wallaschofski, JS Pankow, IH de Boer, B Kestenbaum
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Atopic dermatitis. The EFO term atopic eczema was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
T Hirota, A Takahashi, M Kubo, T Tsunoda, K Tomita, M Sakashita, T Yamada, S Fujieda, S Tanaka, S Doi, A Miyatake, T Enomoto, C Nishiyama, N Nakano, K Maeda, K Okumura, H Ogawa, S Ikeda, E Noguchi, T Sakamoto, N Hizawa, K Ebe, H Saeki, T Sasaki, T Ebihara, M Amagai, S Takeuchi, M Furue, Y Nakamura, M Tamari
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Colorectal cancer (oestrogen-progestogen hormone therapy interaction). The EFO term colorectal cancer, hormone replacement therapy was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
X Garcia-Albeniz, A Rudolph, C Hutter, E White, Y Lin, SA Rosse, JC Figueiredo, TA Harrison, S Jiao, H Brenner, G Casey, TJ Hudson, M Thornquist, L Le Marchand, J Potter, ML Slattery, B Zanke, JA Baron, BJ Caan, SJ Chanock, SI Berndt, D Stelling, CS Fuchs, M Hoffmeister, K Butterbach, M Du, W James Gauderman, MJ Gunter, M Lemire, S Ogino, J Lin, RB Hayes, RW Haile, RE Schoen, GS Warnick, MA Jenkins, SN Thibodeau, FR Schumacher, NM Lindor, LN Kolonel, JL Hopper, J Gong, D Seminara, BM Pflugeisen, CM Ulrich, C Qu, D Duggan, M Cotterchio, PT Campbell, CS Carlson, PA Newcomb, E Giovannucci, L Hsu, AT Chan, U Peters, J Chang-Claude
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Calcium levels. The EFO term calcium measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
CM O'Seaghdha, H Wu, Q Yang, K Kapur, I Guessous, AM Zuber, A Köttgen, C Stoudmann, A Teumer, Z Kutalik, M Mangino, A Dehghan, W Zhang, G Eiriksdottir, G Li, T Tanaka, L Portas, LM Lopez, C Hayward, K Lohman, K Matsuda, S Padmanabhan, D Firsov, R Sorice, S Ulivi, AC Brockhaus, ME Kleber, A Mahajan, FD Ernst, V Gudnason, LJ Launer, A Mace, E Boerwinckle, DE Arking, C Tanikawa, Y Nakamura, MJ Brown, JM Gaspoz, JM Theler, DS Siscovick, BM Psaty, S Bergmann, P Vollenweider, V Vitart, AF Wright, T Zemunik, M Boban, I Kolcic, P Navarro, EM Brown, K Estrada, J Ding, TB Harris, S Bandinelli, D Hernandez, AB Singleton, G Girotto, D Ruggiero, AP d'Adamo, A Robino, T Meitinger, C Meisinger, G Davies, JM Starr, JC Chambers, BO Boehm, BR Winkelmann, J Huang, F Murgia, SH Wild, H Campbell, AP Morris, OH Franco, A Hofman, AG Uitterlinden, F Rivadeneira, U Völker, A Hannemann, R Biffar, W Hoffmann, SY Shin, P Lescuyer, H Henry, C Schurmann, PB Munroe, P Gasparini, N Pirastu, M Ciullo, C Gieger, W März, L Lind, TD Spector, AV Smith, I Rudan, JF Wilson, O Polasek, IJ Deary, M Pirastu, L Ferrucci, Y Liu, B Kestenbaum, JS Kooner, JC Witteman, M Nauck, WH Kao, H Wallaschofski, O Bonny, CS Fox, M Bochud
Striatum Gene Expression Correlates for COCA_TIME_PCT_CHANGE measured in BXD RI Males obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The COCA_TIME_PCT_CHANGE measures Cocaine CPP - difference in percent test time spent relative to preconditioning under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
QTL for high-dose ethanol actions on Chr2 at D2Mit21 (159.38 Mbp , Build 37)
Description:
high-dose ethanol actions spans 134.38 - 184.38 Mbp (NCBI Build 37) on Chr2. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
Authors:
Erwin VG, Markel PD, Johnson TE, Gehle VM, Jones BC
QTL for METH responses for climbing on Chr2 at D2Mc1 (162.34 Mbp , Build 37)
Description:
METH responses for climbing spans 137.34 - 187.34 Mbp (NCBI Build 37) on Chr2. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
QTL for nicotine sensitivity on Chr2 at D2Mit311 (162.39 Mbp , Build 37)
Description:
nicotine sensitivity spans 137.39 - 187.39 Mbp (NCBI Build 37) on Chr2. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
QTL for alcohol consumption on Chr2 at D2Mit148 (183.66 Mbp , Build 37)
Description:
alcohol consumption spans 158.66 - 208.66 Mbp (NCBI Build 37) on Chr2. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
Authors:
Vadasz C, Saito M, Gyetvai B, Mikics E, Vadasz C 2nd
QTL for alcohol preference locus on Chr2 at D2Mit74 (187.16 Mbp , Build 37)
Description:
alcohol preference locus spans 162.16 - 212.16 Mbp (NCBI Build 37) on Chr2. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
QTL for alcohol consumption on Chr2 at D2Mit74 (187.16 Mbp , Build 37)
Description:
alcohol consumption spans 162.16 - 212.16 Mbp (NCBI Build 37) on Chr2. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
Authors:
Vadasz C, Saito M, Gyetvai B, Mikics E, Vadasz C 2nd
Genes associated with Homo sapiens that interact with the MeSH term '3-azibutanol' (C526209). Incorporates data from 23 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Ribose' (D012266). Incorporates data from 298 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'lactacystin' (C067713). Incorporates data from 1 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'entinostat' (C118739). Incorporates data from 11 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Dihydrotestosterone' (D013196). Incorporates data from 6 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Oncorhynchus mykiss that interact with the MeSH term 'Phosphorus, Dietary' (D016226). Incorporates data from 3 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Vitamin K 3' (D024483). Incorporates data from 82 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'hyperforin' (C001654). Incorporates data from 3 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'alpha-Linolenic Acid' (D017962). Incorporates data from 5 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Itraconazole' (D017964). Incorporates data from 42 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'arsenite' (C015001). Incorporates data from 3 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
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