GeneSet Information

Tier IV GS410159 • Genes associated with ADHD based on SNP GWAS effects of inattention symptom_pvalue

DESCRIPTION:

The results of individual GWAS for inattention, hyperactivity–impulsivity, and combined symptoms within each study were combined in a meta-analysis using Meta-Analysis Helper (Metal; Abecasis & Willer, 2007). Gene-based test results of SNP effects from meta-analysis of MN and NU combined, inattentive, and hyperactive-impulsive symptoms. The results of the meta-analysis were examined for gene-based association using Versatile Gene-based Association Study (VEGAS; Liu et al., 2010) to estimate the combined effect of all markers within ±50 kb of 5’ and 3’ untranslated regions of a gene. The significance level required for the gene-based test is p<2.8E-6 (.05/17,787 autosomal genes).

LABEL:

Gene-based ADHD association GWAS inattention symptom_pvalue

SCORE TYPE:

P-Value

THRESHOLD:

<= 0.5

GENES IN THRESHOLD:

7

DATE ADDED:

2025-01-14

DATE UPDATED:

2025-01-14

SPECIES:

AUTHORS:

Ebejer JL, Duffy DL, van der Werf J, Wright MJ, Montgomery G, Gillespie NA, Hickie IB, Martin NG, Medland SE

TITLE:

Genome-wide association study of inattention and hyperactivity-impulsivity measured as quantitative traits.

JOURNAL:

Twin research and human genetics : the official journal of the International Society for Twin Studies Apr 2013, Vol 16, pp. 560-74

ABSTRACT:

Genome-wide association studies (GWAS) of attention-deficit/hyperactivity disorder (ADHD) offer the benefit of a hypothesis-free approach to measuring the quantitative effect of genetic variants on affection status. Generally the findings of GWAS relying on ADHD status have been non-significant, but the one study using quantitative measures of symptoms found SLC9A9 and SLC6A1 were associated with inattention and hyperactivity-impulsivity. Accordingly, we performed a GWAS using quantitative measures of each ADHD subtype measured with the Strengths and Weaknesses of ADHD and Normal Behaviour (SWAN) scale in two community-based samples. This scale captures the full range of attention and kinetic behavior; from high levels of attention and appropriate activity to the inattention and hyperactivity-impulsivity associated with ADHD within two community-based samples. Our discovery sample comprised 1,851 participants (mean age = 22.8 years [4.8]; 50.6% female), while our replication sample comprised 155 participants (mean age = 26.3 years [3.1]; 68.4% females). Age, sex, age × sex, and age2 were included as covariates and the results from each sample were combined using meta-analysis, then analyzed with a gene-based test to estimate the combined effect of markers within genes. We compare our results with markers that have previously been found to have a strong association with ADHD symptoms. Neither the GWAS nor subsequent meta-analyses yielded genome-wide significant results; the strongest effect was observed at rs2110267 (4.62 × 10-7) for symptoms of hyperactivity-impulsivity. The strongest effect in the gene-based test was for GPR139 on symptoms of inattention (6.40 × 10-5). Replication of this study with larger samples will add to our understanding of the genetic etiology of ADHD. PUBMED: 23527680
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Annotation Information

No sequence read archive data associated with this GeneSet.


Meta-Analysis (D017418)
Behavior (D001519)
Comprehension (D032882)
Untranslated Regions (D020506)
Genome-Wide Association Study (D055106)
Attention (D001288)
Attention Deficit Disorder with Hyperactivity (D001289)
Weights and Measures (D014894)
Residence Characteristics (D012111)
Impulsive Behavior (D007175)
Genes, vif (D016341)
Association (D001244)
no abnormal phenotype detected (MP:0002169)
hyperactivity (MP:0001399)
Nucleic acid features (SNP) (EDAM_data:2092)
androsta-1,4-diene-3,17-dione (CHEBI:40799)
advanced glycation end-product (CHEBI:84123)
Hyperactivity (HP:0000752)
attention deficit hyperactivity disorder (DOID:1094)
individual (EFO:0000542)
attention deficit hyperactivity disorder (EFO:0003888)
female organism (UBERON:0003100)

Gene List • 7 Genes

Genes in threshold: 7

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