GeneSet Information

Tier I GS271044 • GWAS Catalog Data for systemic lupus erythematosus in 1,174 Korean ancestry cases, 4,246 Korean ancestry controls

DESCRIPTION:

List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Systemic lupus erythematosus. The EFO term systemic lupus erythematosus was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.

LABEL:

GWAS: systemic lupus erythematosus

SCORE TYPE:

P-Value

DATE ADDED:

2017-05-02

DATE UPDATED:

2024-04-25

SPECIES:

AUTHORS:

CJ Lessard, S Sajuthi, J Zhao, K Kim, JA Ice, H Li, H Ainsworth, A Rasmussen, JA Kelly, M Marion, SY Bang, Y Bin Joo, J Choi, HS Lee, Y Mo Kang, CH Suh, W Tae Chung, SK Lee, JY Choe, S Cheol Shim, J Hee Oh, Y Jin Kim, BG Han, N Shen, H Siew Howe, EK Wakeland, QZ Li, Y Wook Song, PM Gaffney, ME Alarcón-Riquelme, LA Criswell, CO Jacob, RP Kimberly, TJ Vyse, JB Harley, KL Sivils, SC Bae, CD Langefeld, BP Tsao

TITLE:

Identification of a Systemic Lupus Erythematosus Risk Locus Spanning ATG16L2, FCHSD2, and P2RY2 in Koreans.

JOURNAL:

Arthritis & rheumatology (Hoboken, N.J.) May 2016, Vol 68, pp. 1197-209

ABSTRACT:

Systemic lupus erythematosus (SLE) is a chronic autoimmune disorder whose etiology is incompletely understood, but likely involves environmental triggers in genetically susceptible individuals. Using an unbiased genome-wide association (GWA) scan and replication analysis, we sought to identify the genetic loci associated with SLE in a Korean population. PUBMED: 26663301
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Annotation Information

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systemic lupus erythematosus (EFO:0002690)

Gene List • 25 Genes

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