GeneSet Information

Tier I GS269557 • GWAS Catalog Data for brain serotonin transporter measurement in 16 European, African American and Hispanic unmedicated bipolar disorder cases, 17 European, African American and Hispanic unmedicated major depressive disorder cases, 22 controls

DESCRIPTION:

List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was 5-HTT brain serotonin transporter levels. The EFO term brain serotonin transporter measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.

LABEL:

GWAS: brain serotonin transporter measurement

SCORE TYPE:

P-Value

DATE ADDED:

2017-05-02

DATE UPDATED:

2024-04-25

SPECIES:

AUTHORS:

X Liu, DM Cannon, N Akula, PR Moya, GM Knudsen, TE Arentzen, J Steele, G Laje, WC Drevets, FJ McMahon

TITLE:

A non-synonymous polymorphism in galactose mutarotase (GALM) is associated with serotonin transporter binding potential in the human thalamus: results of a genome-wide association study.

JOURNAL:

Molecular psychiatry Jun 2011, Vol 16, pp. 584-5

ABSTRACT:

None PUBMED: 21339755
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brain serotonin transporter measurement (EFO:0004569)

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Supported by NIH R01 AA18776 jointly funded by NIAAA and NIDA, and JAX Center for Precision Genetics NIH U54 OD 020351