GeneSet Information

Tier I GS268613 • GWAS Catalog Data for glaucoma in 305 Japanese ancestry cases, 355 Japanese ancestry controls

DESCRIPTION:

List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Glaucoma. The EFO term glaucoma was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.

LABEL:

GWAS: glaucoma

SCORE TYPE:

P-Value

THRESHOLD:

<= 0.05

GENES IN THRESHOLD:

3

DATE ADDED:

2017-05-02

DATE UPDATED:

2024-10-22

SPECIES:

AUTHORS:

A Meguro, H Inoko, M Ota, N Mizuki, S Bahram

TITLE:

Genome-wide association study of normal tension glaucoma: common variants in SRBD1 and ELOVL5 contribute to disease susceptibility.

JOURNAL:

Ophthalmology Jul 2010, Vol 117, pp. 1331-8.e5

ABSTRACT:

Factors contributing to the development of normal tension glaucoma (NTG), degenerative optic neuropathy characterized by the progressive loss of retinal ganglion cells, optic nerve axons, and visual fields, have not been determined. To identify genetic risk factors for NTG, we performed a genome-wide association study of NTG. PUBMED: 20363506
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Annotation Information

No sequence read archive data associated with this GeneSet.

Gene List • 3 Genes

Genes in threshold: 3

Uploaded As Gene Symbol Homology Score Priority LinkOuts Emphasis