GeneSet Information

Tier I GS268560 • GWAS Catalog Data for Vitiligo in 1,392 European ancestry cases, 2,629 European ancestry controls

DESCRIPTION:

List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Vitiligo. The EFO term Vitiligo was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.

LABEL:

GWAS: Vitiligo

SCORE TYPE:

P-Value

DATE ADDED:

2017-05-02

DATE UPDATED:

2024-04-25

SPECIES:

AUTHORS:

Y Jin, SA Birlea, PR Fain, K Gowan, SL Riccardi, PJ Holland, CM Mailloux, AJ Sufit, SM Hutton, A Amadi-Myers, DC Bennett, MR Wallace, WT McCormack, EH Kemp, DJ Gawkrodger, AP Weetman, M Picardo, G Leone, A Taïeb, T Jouary, K Ezzedine, N van Geel, J Lambert, A Overbeck, RA Spritz

TITLE:

Variant of TYR and autoimmunity susceptibility loci in generalized vitiligo.

JOURNAL:

The New England journal of medicine May 2010, Vol 362, pp. 1686-97

ABSTRACT:

Generalized vitiligo is an autoimmune disease characterized by melanocyte loss, which results in patchy depigmentation of skin and hair, and is associated with an elevated risk of other autoimmune diseases. PUBMED: 20410501
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Annotation Information

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Gene List • 16 Genes

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