GeneSet Information

Tier I GS268327 • GWAS Catalog Data for hippocampal atrophy in 162 European ancestry cases, 192 European ancestry controls, 7 African American cases, 14 African American controls, 1 Asian ancestry cases, 3 Asian ancestry controls, 2 cases

DESCRIPTION:

List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Hippocampal atrophy. The EFO term hippocampal atrophy was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.

LABEL:

GWAS: hippocampal atrophy

SCORE TYPE:

P-Value

DATE ADDED:

2017-05-02

DATE UPDATED:

2024-04-25

SPECIES:

AUTHORS:

SG Potkin, G Guffanti, A Lakatos, JA Turner, F Kruggel, JH Fallon, AJ Saykin, A Orro, S Lupoli, E Salvi, M Weiner, F Macciardi

TITLE:

Hippocampal atrophy as a quantitative trait in a genome-wide association study identifying novel susceptibility genes for Alzheimer's disease.

JOURNAL:

PloS one Aug 2009, Vol 4, pp. e6501

ABSTRACT:

With the exception of APOE epsilon4 allele, the common genetic risk factors for sporadic Alzheimer's Disease (AD) are unknown. PUBMED: 19668339
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Annotation Information

No sequence read archive data associated with this GeneSet.


hippocampal atrophy (EFO:0005039)

Gene List • 31 Genes

Uploaded As Gene Symbol Homology Score Priority LinkOuts Emphasis