GeneSet Information

Tier III GS1778 • Tabakoff et al 2003: Differential Gene Expression of acute functional tolerance to an incoordinating effect of ethanol (HAFT2 vs LAFT2)

DESCRIPTION:

Affymetrix oligonucleotide arrays to assess gene expression in brains of mice selectively bred for differences in acute functional tolerance to an incoordinating effect of ethanol (HAFT mice, high acute functional tolerance; LAFT mice, low acute functional tolerance)

LABEL:

HAFT2 vs LAFT2

SCORE TYPE:

P-Value

THRESHOLD:

<= 0.5

GENES IN THRESHOLD:

551

DATE ADDED:

2008-06-09

DATE UPDATED:

2024-10-22

SPECIES:

AUTHORS:

Tabakoff B, Bhave SV, Hoffman PL

TITLE:

Selective breeding, quantitative trait locus analysis, and gene arrays identify candidate genes for complex drug-related behaviors.

JOURNAL:

The Journal of neuroscience : the official journal of the Society for Neuroscience Jun 2003, Vol 23, pp. 4491-8

ABSTRACT:

Acute functional tolerance to ethanol develops during a single exposure to ethanol; it has been suggested to be a predisposing factor for the development of ethanol dependence. Genetic determinants of acute functional tolerance, as well as of ethanol dependence, have been clearly demonstrated. We describe a novel approach that uses a combination of selective breeding (to segregate genes contributing to the phenotype of interest, i.e., acute functional tolerance to the incoordinating effect of ethanol), quantitative trait locus analysis (to define chromosomal regions associated with acute functional tolerance), and DNA microarray technology (to identify differentially expressed genes in the brains of the selected lines of mice) to identify candidate genes for the complex phenotype of ethanol tolerance. The results indicate the importance of a signal transduction cascade that involves the glutamate receptor delta2 protein, the Ephrin B3 ligand, and the NMDA receptor, as well as a transcriptional regulatory protein that may be induced by activation of the NMDA receptor (zinc finger protein 179) and a protein that can modulate downstream responses to NMDA receptor activation (peroxiredoxin), in mediating acute tolerance to the incoordinating effect of ethanol. PUBMED: 12805289
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Annotation Information

No sequence read archive data associated with this GeneSet.


Brain (D001921)
Ephrin-B3 (D036389)
Animals (D000818)
Promoter Regions, Genetic (D011401)
DNA (D004247)
Behavior (D001519)
Negotiating (D017008)
Polymerase Chain Reaction (D016133)
Mice (D051379)
Chromosome Mapping (D002874)
Gene Expression Profiling (D020869)
Behavior, Animal (D001522)
Quantitative Trait Loci (D040641)
Postural Balance (D004856)
Ataxia (D001259)
Genetic Predisposition to Disease (D020022)
Breeding (D001947)
Binding Sites (D001665)
N-Methylaspartate (D016202)
Alcohol-Induced Disorders (D020751)
Drug Tolerance (D004361)
Oligonucleotide Array Sequence Analysis (D020411)
Mice, Inbred Strains (D008815)
Transcription Factors (D014157)
Causality (D015984)
Receptors, Glutamate (D017470)
Fingers (D005385)
Technology (D013672)
Signal Transduction (D015398)
Glutamic Acid (D018698)
Ethanol (D000431)
CCAAT-Enhancer-Binding Protein-alpha (D022763)
N-methyl-D-aspartate selective glutamate receptor activity (GO:0004972)
transduction (GO:0009293)
signal transduction (GO:0007165)
gene expression (GO:0010467)

Gene List • 551 Genes

Genes in threshold: 551

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Supported by NIH R01 AA18776 jointly funded by NIAAA and NIDA, and JAX Center for Precision Genetics NIH U54 OD 020351

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