GeneSet Information

Tier II GS136603 • spinal bone mineral density 1 (Sbmd1, Published QTL Chr 2)

DESCRIPTION:

QTL associated with spinal bone mineral density 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (31180075)

LABEL:

QTL-Sbmd1-Mouse-Chr 2

SCORE TYPE:

Binary

DATE ADDED:

2012-04-02

DATE UPDATED:

2024-04-25

SPECIES:

AUTHORS:

Benes H, Weinstein RS, Zheng W, Thaden JJ, Jilka RL, Manolagas SC, Shmookler Reis RJ

TITLE:

Chromosomal mapping of osteopenia-associated quantitative trait loci using closely related mouse strains.

JOURNAL:

Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research Apr 2000, Vol 15, pp. 626-33

ABSTRACT:

Peak bone mineral density (BMD) is a highly heritable trait in humans and is currently the best predictor of skeletal fragility underlying osteoporosis. The SAMP6 mouse strain displays unusually low BMD at maturity, and age-dependent osteopenia associated with defective osteoblastogenesis. To identify quantitative trait loci (QTLs) influencing bone density, we constructed crosses between SAMP6 and either AKR/J or SAMP6, two related mouse strains of higher peak BMD. Due to common ancestry of these strains, intercross parents differed at only 39-40% of 227 highly-polymorphic genotyping markers, thus restricting our search to this informative portion of the genome and reducing the number of mice required for QTL significance. Using dual energy X-ray absorptiometry (DEXA), we measured spinal BMD in F2 cross progeny at 4 months of age, and selectively genotyped those in the highest and lowest quartiles for BMD. Based on linear regression of bone density on genotype, including Composite Interval Mapping to enhance mapping precision while adjusting for effects of distal markers, we identified multiple QTLs significantly affecting spinal BMD; these were mapped to regions of chromosomes 2 (two sites, one confirmed in both crosses), 7, 11, 13 and 16. One of these loci had been previously identified as a significant bone-density QTL, while 3 substantiate QTLs suggested by a low-power study of 24 recombinant-inbred mouse lines. Such recurrent appearance of QTLs, especially in crosses involving distantly-related strains, implies that polymorphism at these loci may be favored by evolution and might underlie variation in peak bone density among humans. PUBMED: 10780854
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Annotation Information

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Bone Diseases, Metabolic (D001851)
Bone Density (D015519)
Chromosomes (D002875)
Quantitative Trait Loci (D040641)
Linear Models (D016014)
Osteoporosis (D010024)
Genotype (D005838)
Polymorphism, Genetic (D011110)
Parents (D010290)
Bone and Bones (D001842)
Regression (Psychology) (D012043)
Absorptiometry, Photon (D015502)
decreased bone density (MP:0000063)
osteoporosis (MP:0000066)

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