GeneSet Information

Tier II GS136057 • IgA nephropathy QTL 3 (Ignpq3, Published QTL Chr 15)

DESCRIPTION:

QTL associated with IgA nephropathy QTL 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (98887016)

LABEL:

QTL-Ignpq3-Mouse-Chr 15

SCORE TYPE:

Binary

DATE ADDED:

2012-04-02

DATE UPDATED:

2024-04-25

SPECIES:

AUTHORS:

Nogaki F, Oida E, Kamata T, Kobayashi I, Nomura K, Suyama K, Tahara S, Ono T, Miyawaki S, Serikawa T, Yoshida H, Kita T, Muso E

TITLE:

Chromosomal mapping of hyperserum IgA and glomerular IgA deposition in a high IgA (HIGA) strain of DdY mice.

JOURNAL:

Kidney international Dec 2005, Vol 68, pp. 2517-25

ABSTRACT:

The high IgA (HIGA) strain of ddY mice is an inbred model of IgA nephropathy (IgAN), established by selective mating of outbred ddY mice. HIGA mice show high levels of serum IgA and glomerulonephritis with mesangial IgA deposition. To identify the genetic loci responsible for hyperserum IgA and glomerular IgA deposition in this strain, quantitative trait loci analysis was carried out.By crossing HIGA with BALB/c mice, 244 F2 generations were produced. Serum IgA levels and glomerular IgA deposition were examined at 40 weeks of age. Genetic markers were typed at 105 microsatellites and the quantitative trait loci of hyperserum IgA and glomerular IgA deposition were confirmed using Map Manager QTX software.Two significant quantitative trait loci of hyperserum IgA were identified on chromosome 2 [logarithm of odds (LOD) = 5.01] and chromsome 4 (LOD = 4.45), and a suggestive quantitative trait locus of hyperserum IgA was located on chromosome 1 (LOD = 3.49). On chromosome 15, a significant quantitative trait locus of glomerular IgA deposition was identified (LOD = 4.40) without the hyperserum IgA locus. Serum IgA level was weakly correlated with the intensity of glomerular IgA in 244 F2 mice; however, the quantitative trait loci of hyperserum IgA were not significantly associated with glomerular IgA deposition.These findings indicate that, in HIGA mice, glomerular IgA deposition is mainly regulated by a quantitative trait locus on chromosome 15, and hyperserum IgA synergistically but weakly affect glomerular IgA deposition. The immune disturbance similar to IgAN was revealed to be under multigenic control in HIGA mice. PUBMED: 16316328
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Annotation Information

No sequence read archive data associated with this GeneSet.


Family Characteristics (D005191)
Immunoglobulin A (D007070)
Chromosomes (D002875)
Chromosomes, Human, Pair 1 (D002878)
Software (D012984)
Quantitative Trait Loci (D040641)
Genetic Markers (D005819)
Microsatellite Repeats (D018895)
Glomerulonephritis, IGA (D005922)
Glomerulonephritis (D005921)
Chromosomes, Human, Pair 2 (D002889)
Chromosomes, Human, Pair 15 (D002884)
Genetic Loci (D056426)
glomerulonephritis (MP:0002743)
chromosome (GO:0005694)

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