GeneSet Information

Tier II GS135871 • fatty liver 1 in SMXA (Fl1sa, Published QTL Chr 12)

DESCRIPTION:

QTL associated with fatty liver 1 in SMXA. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (32390581)

LABEL:

QTL-Fl1sa-Mouse-Chr 12

SCORE TYPE:

Binary

DATE ADDED:

2012-04-02

DATE UPDATED:

2024-04-25

SPECIES:

AUTHORS:

Kumazawa M, Kobayashi M, Io F, Kawai T, Nishimura M, Ohno T, Horio F

TITLE:

Searching for genetic factors of fatty liver in SMXA-5 mice by quantitative trait loci analysis under a high-fat diet.

JOURNAL:

Journal of lipid research Sep 2007, Vol 48, pp. 2039-46

ABSTRACT:

Fatty liver is strongly associated with the metabolic syndrome characterized by obesity, insulin resistance, and type 2 diabetes, but the genetic basis and functional mechanisms linking fatty liver with the metabolic syndrome are largely unknown. The SMXA-5 mouse is one of the SMXA recombinant inbred substrains established from SM/J and A/J strains and is a model for polygenic type 2 diabetes, characterized by moderately impaired glucose tolerance, hyperinsulinemia, and mild obesity. SMXA-5 mice also developed fatty liver, and a high-fat diet markedly worsened this trait, although SM/J and A/J mice are resistant to fatty liver development under a high-fat diet. To dissect loci for fatty liver in the A/J regions of the SMXA-5 genome, we attempted quantitative trait loci (QTLs) analysis in (SM/JxSMXA-5)F2 intercross mice fed a high-fat diet. We mapped a major QTL for relative liver weight and liver lipid content near D12Mit270 on chromosome 12 and designated this QTL Fl1sa. The A/J allele at this locus contributes to the increase in these traits. We confirmed the effect of Fl1sa on lipid accumulation in liver using the A/J-Chr12(SM) consomic strain, which showed significantly less accumulation than A/J mice. This suggests that the SM/J and A/J strains, neither of which develops fatty liver, possess loci causing fatty liver and that the coexistence of these loci causes fatty liver in SMXA-5 mice. PUBMED: 17595448
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Annotation Information

No sequence read archive data associated with this GeneSet.


Alleles (D000483)
Glucose (D005947)
Insulin Resistance (D007333)
Chromosomes (D002875)
Quantitative Trait Loci (D040641)
Fatty Liver (D005234)
Chromosomes, Human, Pair 12 (D002881)
Insulin (D007328)
Obesity (D009765)
Hyperinsulinism (D006946)
hepatic steatosis (MP:0002628)
impaired glucose tolerance (MP:0005293)
insulin resistance (MP:0005331)
increased circulating insulin level (MP:0002079)
liver development (GO:0001889)
chromosome (GO:0005694)

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