GeneSet Information

Tier II GS135672 • cholesterol QTL 1 (Cq1, Published QTL Chr 1)

DESCRIPTION:

QTL associated with cholesterol QTL 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (158554749)

LABEL:

QTL-Cq1-Mouse-Chr 1

SCORE TYPE:

Binary

DATE ADDED:

2012-04-02

DATE UPDATED:

2024-04-25

SPECIES:

AUTHORS:

Suto J, Sekikawa K

TITLE:

Quantitative trait locus analysis of plasma cholesterol and triglyceride levels in KK x RR F2 mice.

JOURNAL:

Biochemical genetics Oct 2003, Vol 41, pp. 325-41

ABSTRACT:

A previous quantitative trait locus (QTL) study on hyperlipidemia in C57BL/6J x KK-Ay/a F2 mice identified three significant cholesterol QTLs (Cq1 and Cq2 on chromosome 1, and Cq3 on chromosome 3), and a suggestive triglyceride QTL on chromosome 9. An alternative analysis of this study identified a novel cholesterol QTL on chromosome 9 (Cq4), and a significant triglyceride QTL on chromosome 9 (Tgq1). In the present study, QTL analysis was performed on KK x RR F2 mice. A significant cholesterol QTL (Cq5, lod score 5.6) was identified on chromosome 9, and a significant triglyceride QTL (Tgq2, lod score 4.7) was identified on chromosome 8. The Cq5 locus was mapped to a region similar to the Cq4 locus. On the other hand, the Tgq2 locus overlapped with the QTL region responsible for glucose intolerance (Giq1) that was identified in a previous study. The results suggest that a different combination of QTLs is involved in the trait when a different counterpart strain is used. Identification of distinct, but related traits in an identical chromosomal region will facilitate revealing the responsible gene. PUBMED: 14974682
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Annotation Information

No sequence read archive data associated with this GeneSet.


Chromosomes, Human, Pair 8 (D002898)
Chromosomes, Human, Pair 9 (D002899)
Glucose (D005947)
Chromosomes (D002875)
Chromosomes, Human, Pair 1 (D002878)
Quantitative Trait Loci (D040641)
Glucose Intolerance (D018149)
Cholesterol (D002784)
Identification (Psychology) (D007062)
Lod Score (D008126)
Hyperlipidemias (D006949)
hyperlipidemia (MP:0001548)
impaired glucose tolerance (MP:0005293)
chromosome (GO:0005694)

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