GeneSet Information

Tier II GS135473 • blood pressure QTL 9 (Bpq9, Published QTL Chr 16)

DESCRIPTION:

QTL associated with blood pressure QTL 9. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (80530693)

LABEL:

QTL-Bpq9-Mouse-Chr 16

SCORE TYPE:

Binary

DATE ADDED:

2012-04-02

DATE UPDATED:

2024-04-25

SPECIES:

AUTHORS:

DiPetrillo K, Tsaih SW, Sheehan S, Johns C, Kelmenson P, Gavras H, Churchill GA, Paigen B

TITLE:

Genetic analysis of blood pressure in C3H/HeJ and SWR/J mice.

JOURNAL:

Physiological genomics Apr 2004, Vol 17, pp. 215-20

ABSTRACT:

Hypertension is a complex phenotype induced by multiple environmental and genetic factors. Quantitative trait locus (QTL) analysis is a powerful method for identifying genomic regions underlying complex diseases. We conducted a QTL analysis of blood pressure in mice using 217 F(2) progeny (males and females) from a cross between the normotensive C3H/HeJ and hypertensive SWR/J inbred strains. Our analysis identified significant QTL controlling blood pressure on chromosome 1 [Chr 1; Bpq8; peak 78 cM; 95% confidence interval 64-106 cM; logarithm of the odds ratio (LOD) 3.5; peak marker D1Mit105] and on Chr 16 (Bpq9; peak 56 cM; 95% confidence interval 46-58 cM; LOD 3.6; peak marker D16Mit158). Bpq8 was previously identified in a cross between C57BL/6J and A/J mice, and we narrowed this QTL from 42 to 18 cM (95% confidence interval 68-86 cM) by combining the data from these crosses. By examining Bpq8 for regions where ancestral alleles were conserved among the high allele strains (C57BL/6J, SWR/J) and different from the low allele strains (A/J, C3H/HeJ), we identified a 2.3-cM region where the high allele strains shared a common haplotype. Bpq8 is concordant with known QTL in both rat and human, suggesting that the causal gene underlying Bpq8 may be conserved as a disease gene in human hypertension. PUBMED: 14996992
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Annotation Information

No sequence read archive data associated with this GeneSet.


Alleles (D000483)
Pressure (D011312)
Chromosomes (D002875)
Chromosomes, Human, Pair 1 (D002878)
Quantitative Trait Loci (D040641)
Odds Ratio (D016017)
Hypertension (D006973)
Blood Pressure (D001794)
Haplotypes (D006239)
Confidence Intervals (D016001)
hypertension (MP:0000231)
chromosome (GO:0005694)

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