GeneSet Information

Tier II GS135290 • alcohol withdrawal 1 (Alcw1, Published QTL Chr 1)

DESCRIPTION:

QTL associated with alcohol withdrawal 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (174934329)

LABEL:

QTL-Alcw1-Mouse-Chr 1

SCORE TYPE:

Binary

DATE ADDED:

2012-04-02

DATE UPDATED:

2024-10-22

SPECIES:

AUTHORS:

Kozell L, Belknap JK, Hofstetter JR, Mayeda A, Buck KJ

TITLE:

Mapping a locus for alcohol physical dependence and associated withdrawal to a 1.1 Mb interval of mouse chromosome 1 syntenic with human chromosome 1q23.2-23.3.

JOURNAL:

Genes, brain, and behavior Jul 2008, Vol 7, pp. 560-7

ABSTRACT:

Physiological dependence and associated withdrawal episodes are thought to constitute a motivational force perpetuating continued alcohol use/abuse. Although no animal model duplicates alcoholism, models for specific factors, like the withdrawal syndrome, are useful to identify potential determinants of liability in humans. We previously detected quantitative trait loci (QTLs) with large effects on predisposition to physical dependence and associated withdrawal following chronic or acute alcohol exposure to a large region of chromosome 1 in mice (Alcdp1 and Alcw1, respectively). Here, we provide the first confirmation of Alcw1 in a congenic strain, and, using interval-specific congenic strains, narrow its position to a minimal 1.1 Mb (maximal 1.7 Mb) interval syntenic with human chromosome 1q23.2-23.3. We also report the development of a small donor segment congenic that confirms capture of a gene(s) affecting physical dependence after chronic alcohol exposure within this small interval. This congenic will be invaluable for determining whether this interval harbors a gene(s) involved in additional alcohol responses for which QTLs have been detected on distal chromosome 1, including alcohol consumption, alcohol-conditioned aversion and -induced ataxia. The possibility that this QTL plays an important role in such diverse responses to alcohol makes it an important target. Moreover, human studies have identified markers on chromosome 1q associated with alcoholism, although this association is still suggestive and mapped to a large region. Thus, the fine mapping of this QTL and analyses of the genes within the QTL interval can inform developing models for genetic determinants of alcohol dependence in humans. PUBMED: 18363856
Find other GeneSets from this publication

Annotation Information

No sequence read archive data associated with this GeneSet.


Animals (D000818)
Play and Playthings (D010988)
Tissue Donors (D014019)
Chromosomes (D002875)
Chromosomes, Human (D002877)
Chromosomes, Human, Pair 1 (D002878)
Research Report (D058028)
Quantitative Trait Loci (D040641)
Alcohol Drinking (D000428)
Models, Animal (D023421)
Association (D001244)
Alcoholism (D000437)
chromosome (GO:0005694)

Gene List • 443 Genes

Uploaded As Gene Symbol Homology Score Priority LinkOuts Emphasis