GeneSet Information

Tier II GS135261 • age of eyelid opening (Aeyo, Published QTL Chr 5)

DESCRIPTION:

QTL associated with age of eyelid opening. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (104668024)

LABEL:

QTL-Aeyo-Mouse-Chr 5

SCORE TYPE:

Binary

DATE ADDED:

2012-04-02

DATE UPDATED:

2020-05-06

SPECIES:

AUTHORS:

Le Roy I, Perez-Diaz F, Cherfouh A, Roubertoux PL

TITLE:

Preweanling sensorial and motor development in laboratory mice: quantitative trait loci mapping.

JOURNAL:

Developmental psychobiology Mar 1999, Vol 34, pp. 139-58

ABSTRACT:

Chromosomal mapping of genes linked with 19 measures of sensorial, motor, and body weight development were investigated. Chromosomal mapping is the first step towards gene identification. When a genomic region is shown to be linked to a trait, it is possible to select a reduced number of candidate genes that have been previously mapped on this region. The involvement of every gene can be individually tested either by molecular (transgenesis, homologous recombination) or traditional methods (congenicity). Mapping was performed using 389 males and females from two inbred strains of laboratory mice C57BL/6By and NZB/BlNJ, their reciprocal F1s and F2s. Thirty-six Quantitative Trait Loci (QTL) were mapped, 12 reached the 3.13 lod score, being thus considered as confirmed. These QTL were tentatively labeled: Cliff Drop Aversion (Cliff Qtl), Geotaxia (Geot Qtl), Vertical Clinging (VertCling Qtl), Bar Holding with the 4 paws (BH4P Qtl), Age at Eyelid Opening (Aeyo Qtl), Visual Placing (Vispl Qtl), Startle Response (Start Qtl1, Start Qtl2), Body Weight at Day 10 in Males pooled with Females (Bwefmd10 Qtl), and Body Weight at Day 30 in males (Bwemd30 Qtl). For the majority of the developmental measures, the QTL that were mapped contributed little to the phenotypic variance, even when mitochondrial DNA contribution was included: Righting Response (12.7%), Cliff Drop Aversion (10%), Crossed Extensor Response (18.1%), Geotaxia (16.2%), Bar Holding Response for 10 s (12.1%), Bar Holding Response with 4 paws (8.1%), Vertical Clinging (9.3%), Vertical Climbing (5%), Startle Response (21.2%), Eyelid Opening (14.6%), Visual Placing (22%), Body Weight at Day 10 (27%), Body Weight at Day 15 in Females (52.5%), Body Weight at Day 15 in Males (17%), Body Weight at Day 30 in Females (42%), and Body Weight at Day 30 in Males (48%). A factorial analysis of the correlations between the measures of development did not provide evidence of a general factor. A general genetic factor of development was also rejected because few common genetic correlates were discovered for the 19 measures of development (Body Weight at Days 15 and 30 in Females on Chromosome 2, Eyelid Opening and Body Weight at Day 10 on Chromosome 5 and mitochondrial genome for five measures). Co-identification of genes, the function of which were previously known thanks to newly discovered QTL, should help to explain the function of QTL. Present data help to highlight candidate regions including several genes that could be candidates for the QTL function. Large confidence intervals were obtained as usual from the F2 intercrossed population. More stringent methods are suggested for more efficient co-identification. PUBMED: 10086232
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Annotation Information

No sequence read archive data associated with this GeneSet.


Chromosomes, Human, Pair 5 (D002895)
Laboratories (D007753)
Chromosomes (D002875)
Quantitative Trait Loci (D040641)
Chromosomes, Human, Pair 2 (D002889)
Genome, Mitochondrial (D054629)
DNA, Mitochondrial (D004272)
Reflex, Righting (D057897)
Methods (D008722)
Identification (Psychology) (D007062)
Lod Score (D008126)
Body Weight (D001835)
Eyelids (D005143)
Confidence Intervals (D016001)
startle response (GO:0001964)
righting reflex (GO:0060013)
chromosome (GO:0005694)

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