GeneSet Information

Tier II GS129098 • bone mineral density 1b (Bmd1b Published QTL Chr 1)

DESCRIPTION:

QTL associated with bone mineral density 1b. The confidence interval is Chr1:174629360-164247887 bp,+strand

LABEL:

QTL-Bmd1b-Mouse-Chr 1

SCORE TYPE:

Binary

DATE ADDED:

2012-04-02

DATE UPDATED:

2024-10-22

SPECIES:

AUTHORS:

Edderkaoui B, Baylink DJ, Beamer WG, Wergedal JE, Porte R, Chaudhuri A, Mohan S

TITLE:

Identification of mouse Duffy antigen receptor for chemokines (Darc) as a BMD QTL gene.

JOURNAL:

Genome research May 2007, Vol 17, pp. 577-85

ABSTRACT:

It is now well known that bone mineral density (BMD) variance is determined by both genetic and environmental factors. Accordingly, studies in human and animal models have revealed evidence for the presence of several quantitative trait loci (QTL) that contribute to BMD variations. However, the identification of BMD QTL genes remains a big challenge. In the current study, we focused our efforts to identify the BMD candidate gene in chromosome 1 (Chr 1) QTL that was detected from a cross involving high BMD CAST/EiJ (CAST) and low BMD C57BL/6J (B6) mice. To this end, we have combined several approaches including: (1) fine mapping the BMD QTL in Chr 1 of the B6.CAST F2 female mice using a large number of polymorphic markers; (2) the generation of congenic sublines of mice by repeated backcrossing of CAST with B6 mice and phenotype characterization; (3) expression profiling genes in the QTL region; and (4) SNP analyses to identify the mouse Duffy Antigen Receptor for Chemokines (Darc) as a candidate gene for Chr 1 BMD QTL2. We verified the involvement of the Darc protein in BMD variation by evaluating the skeletal phenotype of Darc-knockout mice and congenic sublines of mice carrying small chromosomal segments from CAST BMD QTL. Based on the findings that Darc-antibody blocked formation of multinucleated osteoclasts in vitro and that Darc from CAST binds chemokines, known to regulate osteoclast formation, with reduced affinity compared with Darc from B6 mice, we conclude that Darc regulates BMD negatively by increasing osteoclast formation, and that the genetic association between Darc gene polymorphism and BMD variations in humans merits investigation. PUBMED: 17416748
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Annotation Information

No sequence read archive data associated with this GeneSet.


Osteoclasts (D010010)
Animals (D000818)
Bone Density (D015519)
Chromosomes (D002875)
Chromosomes, Human, Pair 1 (D002878)
Antigens (D000941)
Quantitative Trait Loci (D040641)
Models, Animal (D023421)
Lifting (D017770)
Receptors, Antigen (D011946)
Polymorphism, Genetic (D011110)
In Vitro (D007176)
Inbreeding (D007178)
Bone and Bones (D001842)
Identification (Psychology) (D007062)
Chemokines (D018925)
Association (D001244)
Confidence Intervals (D016001)
biosynthetic process (GO:0009058)
chromosome (GO:0005694)

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