Whole Brain Gene Expression Correlates for HAND_BASELINE measured in BXD RI Females & Males obtained using INIA Brain mRNA M430 (Jun06) RMA. The HAND_BASELINE measures Handling induced convulsion baseline under the domain Ethanol HIC. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Rotarod Baseline Chr# X rs3702256 (131483732) with right flanking marker CEL-X_106858553 (112637354) and left marker gnfX.148.995 (165265639). This was mapped in 300 + (b6x129)F2 mice.
"Enables the transfer of a specific substance or group of related substances from one side of a membrane to the other." [GOC:jid, GOC:mtg_transport, ISBN:0815340729]
"Enables the directed movement of a specific substance or group of related substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells." [GOC:mtg_transport]
Genes with particular expression in the Anterior olfactory nucleus, dorsal part. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Orbital area, medial part, layer 1. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Taenia tecta, dorsal part, layer 1. Data represent fold expression difference in structure versus grey matter average expression.
Striatum gene expression data from short term selected lines for sensitivity to haloperidol-induced catalepsy. This was interrogated using a weighted gene coexpression network analysis (WGCNA). Results in the grey cluster uploaded here with binary values.
Authors:
Iancu OD, Darakjian P, Malmanger B, Walter NA, McWeeney S, Hitzemann R
Top 200 genes enriched in Astrocytes compared to neurons, endothelial cells, microglia, myelinating oligodendrocytes, newly formed oligodendrocytes and OPCs.
Authors:
Zhang Y, Chen K, Sloan SA, Bennett ML, Scholze AR, O\'Keeffe S, Phatnani HP, Guarnieri P, Caneda C, Ruderisch N, Deng S, Liddelow SA, Zhang C, Daneman R, Maniatis T, Barres BA, Wu JQ
GSE17721_CTRL_VS_LPS_12H_BMDM_UP
Genes up-regulated in comparison of control dendritic cells (DC) at 12 h versus those stimulated with LPS (TLR4 agonist) at 12 h.
c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies.
Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections.
gene2msig v. 0.1.0
Last updated 2015.08.31
GSE27786_LSK_VS_ERYTHROBLAST_DN
Genes down-regulated in comparison of LSK versus erythroblasts.
c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies.
Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections.
gene2msig v. 0.1.0
Last updated 2015.08.31
GSE32423_MEMORY_VS_NAIVE_CD8_TCELL_IL7_IL4_UP
Genes up-regulated in comparison of memory CD8 T cells treated with IL4 <a href='http://www.ncbi.nlm.nih.gov/gene/3565'>[GeneID=3565]</a> and IL7 <a href='http://www.ncbi.nlm.nih.gov/gene/3574'>[GeneID=3574]</a> versus naive CD8 T cells treated with IL4 <a href='http://www.ncbi.nlm.nih.gov/gene/3565'>[GeneID=3565]</a> and IL7 <a href='http://www.ncbi.nlm.nih.gov/gene/3574'>[GeneID=3574]</a>.
c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies.
Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections.
gene2msig v. 0.1.0
Last updated 2015.08.31
GSE10094_LCMV_VS_LISTERIA_IND_EFF_CD4_TCELL_DN
Genes down-regulated in comparison of CD4 <a href='http://www.ncbi.nlm.nih.gov/gene/920'>[GeneID=920]</a> T cells from mice challenged with LCMV versus those challenged with Listeria-gp61.
c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies.
Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections.
gene2msig v. 0.1.0
Last updated 2015.08.31
GSE27786_BCELL_VS_ERYTHROBLAST_DN
Genes down-regulated in comparison of B cells versus erythroblasts.
c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies.
Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections.
gene2msig v. 0.1.0
Last updated 2015.08.31
GSE32423_IL7_VS_IL7_IL4_NAIVE_CD8_TCELL_DN
Genes down-regulated in comparison of naive CD8 T cells treated with IL7 <a href='http://www.ncbi.nlm.nih.gov/gene/3574'>[GeneID=3574]</a> versus those treated with IL4 <a href='http://www.ncbi.nlm.nih.gov/gene/3565'>[GeneID=3565]</a> and IL7 <a href='http://www.ncbi.nlm.nih.gov/gene/3574'>[GeneID=3574]</a>.
c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies.
Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections.
gene2msig v. 0.1.0
Last updated 2015.08.31
GSE30083_SP1_VS_SP3_THYMOCYTE_DN
Genes down-regulated in comparison of SP1 thymocytes versus SP3 thymocytes.
c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies.
Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections.
gene2msig v. 0.1.0
Last updated 2015.08.31
GSE13306_TREG_VS_TCONV_SPLEEN_DN
Genes down-regulated in comparison of regulatory T cell (Treg) versus conventional T cells.
c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies.
Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections.
gene2msig v. 0.1.0
Last updated 2015.08.31
GSE27786_NKCELL_VS_ERYTHROBLAST_DN
Genes down-regulated in comparison of NK cells versus erythroblasts.
c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies.
Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections.
gene2msig v. 0.1.0
Last updated 2015.08.31
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