Genome-wide association studies were conducted to examine
genetic associations for the quantitative measures of inattention.
Gene-Based Test Results of SNP Effects From Meta-Analysis for inattention in both mother reported and self reported data.
Authors:
Ebejer JL, Duffy DL, van der Werf J, Wright MJ, Montgomery G, Gillespie NA, Hickie IB, Martin NG, Medland SE
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Attention deficit hyperactivity disorder (inattention symptoms). The EFO term attention deficit hyperactivity disorder was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
JL Ebejer, DL Duffy, J van der Werf, MJ Wright, G Montgomery, NA Gillespie, IB Hickie, NG Martin, SE Medland
QTL for nicotine sensitivity on Chr7 at D7Mit66 (116.91 Mbp , Build 37)
Description:
nicotine sensitivity spans 91.91 - 141.91 Mbp (NCBI Build 37) on Chr7. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
QTL for alcohol preference locus on Chr7 at D7Mit105 (126.73 Mbp , Build 37)
Description:
alcohol preference locus spans 101.73 - 151.73 Mbp (NCBI Build 37) on Chr7. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
alcohol preference locus 14, female specific at D7Mit105 with a LOD score of 1.84 (p < 0.004) spans and preference correlation of 0.591 101.73 - 151.73 Mbp (NCBI Build 37) on Chr7. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
QTL for METH responses for home cage activity on Chr7 at D7Mit12 (129.57 Mbp , Build 37)
Description:
METH responses for home cage activity spans 104.57 - 154.57 Mbp (NCBI Build 37) on Chr7. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
QTL for METH responses for body temperature on Chr7 at Xmv76 (137.02 Mbp , Build 37)
Description:
METH responses for body temperature spans 112.02 - 162.02 Mbp (NCBI Build 37) on Chr7. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
Genes associated with Homo sapiens that interact with the MeSH term 'Plant Extracts' (D010936). Incorporates data from 489 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Acetaminophen' (D000082). Incorporates data from 1 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Ethanol Induced Hypothermia Chr# 7 rs13479153(25722935) with right flanking marker rs3700068(4187548) and left marker rs3716088(140189839). This was mapped in 300 + (b6x129)F2 mice.
Rotarod Baseline Chr# 7 rs4226783(100081465) with right flanking marker rs8260975(53682778) and left marker rs13479506 (131822778). This was mapped in 300 + (b6x129)F2 mice.
Average rotarod training latency Chr# 7 mCV23423763(68111945) with right flanking marker rs3700068(4187548) and left marker rs3663988(146505067). This was mapped in 300 + (b6x129)F2 mice.
QTL associated with "alcohol preference locus 12, male specific". This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (135707912)
QTL associated with "alcohol preference locus 14, female specific". This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (135707912)
QTL associated with behavioral response to methamphetamines 6. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (143722527)
QTL associated with cystic fibrosis body weight 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (126237672)
QTL associated with cystic fibrosis lung disease 4. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (126237672)
QTL associated with collagen induced arthritis 42. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (139448713)
QTL associated with determination of interleukin 4 commitment 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (136360966)
QTL associated with experimental allergic encephalomyelitis susceptibility 26. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (122709201)
Authors:
Jirholt J, Lindqvist AK, Karlsson J, Andersson A, Holmdahl R
QTL associated with experimental allergic encephalomyelitis susceptibility 4. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (108349641)
Authors:
Teuscher C, Doerge RW, Fillmore PD, Blankenhorn EP
QTL associated with ethanol induced thermoregulation 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (125537552)
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