List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Calcium levels. The EFO term calcium measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
K Kapur, T Johnson, ND Beckmann, J Sehmi, T Tanaka, Z Kutalik, U Styrkarsdottir, W Zhang, D Marek, DF Gudbjartsson, Y Milaneschi, H Holm, A Diiorio, D Waterworth, Y Li, AB Singleton, US Bjornsdottir, G Sigurdsson, DG Hernandez, R Desilva, P Elliott, GI Eyjolfsson, JM Guralnik, J Scott, U Thorsteinsdottir, S Bandinelli, J Chambers, K Stefansson, G Waeber, L Ferrucci, JS Kooner, V Mooser, P Vollenweider, JS Beckmann, M Bochud, S Bergmann
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Calcium levels. The EFO term calcium measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
CM O'Seaghdha, Q Yang, NL Glazer, TS Leak, A Dehghan, AV Smith, WH Kao, K Lohman, SJ Hwang, AD Johnson, A Hofman, AG Uitterlinden, YD Chen, EM Brown, DS Siscovick, TB Harris, BM Psaty, J Coresh, V Gudnason, JC Witteman, YM Liu, BR Kestenbaum, CS Fox, A Köttgen
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Calcium levels. The EFO term calcium measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
N Vinayagamoorthy, SH Yim, SH Jung, SW Park, YJ Kim, BJ Kim, YJ Chung
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Calcium levels. The EFO term calcium measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
X Chang, J Li, Y Guo, Z Wei, FD Mentch, C Hou, Y Zhao, H Qiu, C Kim, PM Sleiman, H Hakonarson
A condition caused by a deficiency of PARATHYROID HORMONE (or PTH). It is characterized by HYPOCALCEMIA and hyperphosphatemia. Hypocalcemia leads to TETANY. The acquired form is due to removal or injuries to the PARATHYROID GLANDS. The congenital form is due to mutations of genes, such as TBX1; (see DIGEORGE SYNDROME); CASR encoding CALCIUM-SENSING RECEPTOR; or PTH encoding parathyroid hormone.
Generated by gene2mesh v. 1.1.1
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Serum parathyroid hormone levels. The EFO term parathyroid hormone measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
C Robinson-Cohen, PL Lutsey, ME Kleber, CM Nielson, BD Mitchell, JC Bis, KM Eny, L Portas, J Eriksson, M Lorentzon, DL Koller, Y Milaneschi, A Teumer, S Pilz, M Nethander, E Selvin, W Tang, LC Weng, HS Wong, D Lai, M Peacock, A Hannemann, U Völker, G Homuth, M Nauk, F Murgia, JW Pattee, E Orwoll, JM Zmuda, JA Riancho, M Wolf, F Williams, B Penninx, MJ Econs, KA Ryan, C Ohlsson, AD Paterson, BM Psaty, DS Siscovick, JI Rotter, M Pirastu, E Streeten, W März, C Fox, J Coresh, H Wallaschofski, JS Pankow, IH de Boer, B Kestenbaum
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Phosphorus levels. The EFO term phosphorus measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
B Kestenbaum, NL Glazer, A Köttgen, JF Felix, SJ Hwang, Y Liu, K Lohman, SB Kritchevsky, DB Hausman, AK Petersen, C Gieger, JS Ried, T Meitinger, TM Strom, HE Wichmann, H Campbell, C Hayward, I Rudan, IH de Boer, BM Psaty, KM Rice, YD Chen, M Li, DE Arking, E Boerwinkle, J Coresh, Q Yang, D Levy, FJ van Rooij, A Dehghan, F Rivadeneira, AG Uitterlinden, A Hofman, CM van Duijn, MG Shlipak, WH Kao, JC Witteman, DS Siscovick, CS Fox
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Kidney stones. The EFO term kidney stone was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
A Oddsson, P Sulem, H Helgason, VO Edvardsson, G Thorleifsson, G Sveinbjörnsson, E Haraldsdottir, GI Eyjolfsson, O Sigurdardottir, I Olafsson, G Masson, H Holm, DF Gudbjartsson, U Thorsteinsdottir, OS Indridason, R Palsson, K Stefansson
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Calcium levels. The EFO term calcium measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
CM O'Seaghdha, H Wu, Q Yang, K Kapur, I Guessous, AM Zuber, A Köttgen, C Stoudmann, A Teumer, Z Kutalik, M Mangino, A Dehghan, W Zhang, G Eiriksdottir, G Li, T Tanaka, L Portas, LM Lopez, C Hayward, K Lohman, K Matsuda, S Padmanabhan, D Firsov, R Sorice, S Ulivi, AC Brockhaus, ME Kleber, A Mahajan, FD Ernst, V Gudnason, LJ Launer, A Mace, E Boerwinckle, DE Arking, C Tanikawa, Y Nakamura, MJ Brown, JM Gaspoz, JM Theler, DS Siscovick, BM Psaty, S Bergmann, P Vollenweider, V Vitart, AF Wright, T Zemunik, M Boban, I Kolcic, P Navarro, EM Brown, K Estrada, J Ding, TB Harris, S Bandinelli, D Hernandez, AB Singleton, G Girotto, D Ruggiero, AP d'Adamo, A Robino, T Meitinger, C Meisinger, G Davies, JM Starr, JC Chambers, BO Boehm, BR Winkelmann, J Huang, F Murgia, SH Wild, H Campbell, AP Morris, OH Franco, A Hofman, AG Uitterlinden, F Rivadeneira, U Völker, A Hannemann, R Biffar, W Hoffmann, SY Shin, P Lescuyer, H Henry, C Schurmann, PB Munroe, P Gasparini, N Pirastu, M Ciullo, C Gieger, W März, L Lind, TD Spector, AV Smith, I Rudan, JF Wilson, O Polasek, IJ Deary, M Pirastu, L Ferrucci, Y Liu, B Kestenbaum, JS Kooner, JC Witteman, M Nauck, WH Kao, H Wallaschofski, O Bonny, CS Fox, M Bochud
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Magnesium levels. The EFO term magnesium measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
X Chang, J Li, Y Guo, Z Wei, FD Mentch, C Hou, Y Zhao, H Qiu, C Kim, PM Sleiman, H Hakonarson
Cerebellum Gene Expression Correlates for C2HCOUNT60 measured in BXD RI Females obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The C2HCOUNT60 measures Open Field locomotion (activity beam breaks) 45-60 min post 2nd cocaine under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for C2HCOUNT60 measured in BXD RI Males obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The C2HCOUNT60 measures Open Field locomotion (activity beam breaks) 45-60 min post 2nd cocaine under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for C2HDIS60 measured in BXD RI Females obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The C2HDIS60 measures Open Field Total34 horizontal distance (cm) 45-60 min post 2nd cocaine under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Cerebellum Gene Expression Correlates for C2VCOUNT60 measured in BXD RI Males obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The C2VCOUNT60 measures Open Field rears 45-60 min post 2nd cocaine under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Whole Brain Gene Expression Correlates for OF_HAB_RATIO measured in BXD RI Males obtained using INIA Brain mRNA M430 (Jun06) RMA. The OF_HAB_RATIO measures Open Field - Habituation ratio (First:Last intervals) under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Whole Brain Gene Expression Correlates for HAND_7HOURS measured in BXD RI Females & Males obtained using INIA Brain mRNA M430 (Jun06) RMA. The HAND_7HOURS measures Handling induced convulsions 7 hrs after ethanol under the domain Ethanol HIC. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Whole Brain Gene Expression Correlates for HAND_7HOURS measured in BXD RI Males obtained using INIA Brain mRNA M430 (Jun06) RMA. The HAND_7HOURS measures Handling induced convulsions 7 hrs after ethanol under the domain Ethanol HIC. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
QTL for METH responses for home cage activity on Chr16 at Comt (22.04 Mbp , Build 37)
Description:
METH responses for home cage activity spans 0.00 - 47.04 Mbp (NCBI Build 37) on Chr16. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
QTL for alcohol preference locus on Chr16 at D16Xrf580 (59.71 Mbp , Build 37)
Description:
alcohol preference locus spans 34.71 - 84.71 Mbp (NCBI Build 37) on Chr16. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
Genes associated with Bos taurus that interact with the MeSH term 'deacetoxyvinzolidine' (C107832). Incorporates data from 2 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Flufenamic Acid' (D005439). Incorporates data from 5 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'chelerythrine' (C016299). Incorporates data from 5 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
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