Striatum Gene Expression Correlates for ACTI_DIFF_05 measured in BXD RI Females obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The ACTI_DIFF_05 measures Difference in distance traveled (cm) during the first five min (saline-ethanol) under the domain Ethanol. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Whole Brain Gene Expression Correlates for SPD_TIMEDOWEL0SEC measured in BXD RI Females obtained using INIA Brain mRNA M430 (Jun06) RMA. The SPD_TIMEDOWEL0SEC measures Dowel Test - Time 0 Sec under the domain Porsolt. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Genes with particular expression in the Accessory olfactory bulb. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Accessory olfactory bulb, glomerular layer. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Accessory olfactory bulb, granular layer. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Accessory olfactory bulb, mitral layer. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Nucleus of the lateral olfactory tract, molecular layer. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Bed nucleus of the accessory olfactory tract. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Simple lobule, granular layer. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Paramedian lobule, molecular layer. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Copula pyramidis, granular layer. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Simple lobule, molecular layer. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Paramedian lobule, granular layer. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Copula pyramidis, molecular layer. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Paramedian lobule. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Copula pyramidis. Data represent fold expression difference in structure versus grey matter average expression.
Genes with particular expression in the Hemispheric regions. Data represent fold expression difference in structure versus grey matter average expression.
Genes identified as expressed higher (up) in the AJ strain than in the NZO strain. Differentially expressed genes had a Q-value < 0.05 following the Benjamini-Hochberg methodology for false discovery rates in the limma+voom pipeline within edgeR. Q-value is reported from the topTable function.
Genes identified as expressed higher (up) in the AJ strain than in the CAST strain. Differentially expressed genes had a Q-value < 0.05 following the Benjamini-Hochberg methodology for false discovery rates in the limma+voom pipeline within edgeR. Q-value is reported from the topTable function.
Genes identified as expressed higher (up) in the AJ strain than in the NZO strain. Differentially expressed genes had a Q-value < 0.05 following the Benjamini-Hochberg methodology for false discovery rates in the limma+voom pipeline within edgeR. Q-value is reported from the topTable function.
Genes identified as expressed higher (up) in the AJ strain than in the PWK strain. Differentially expressed genes had a Q-value < 0.05 following the Benjamini-Hochberg methodology for false discovery rates in the limma+voom pipeline within edgeR. Q-value is reported from the topTable function.
Genes identified as expressed higher (up) in the AJ strain than in the NZO strain. Differentially expressed genes had a Q-value < 0.05 following the Benjamini-Hochberg methodology for false discovery rates in the limma+voom pipeline within edgeR. Q-value is reported from the topTable function.
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