GeneSet Title
Tier IV
Human
12 Genes
GS398320
LABEL: over and under-expressed genes from lung fluid cellsDESCRIPTION: Inflammatory cytokines with under or over-expression in COVID-19 patients from Fig. 4A.
Tier IV
Human
5 Genes
GS398321
LABEL: Apoptosis-related genes overexpressed in Covid-19 patient peripheral bloodDESCRIPTION: RNA-seq data was analyzed from peripheral blood of three healthy volunteers and two Covid 19 patients. Apoptosis-related pathway genes were overexpressed in Covid 19 patients vs healthy volunteers.
Tier IV
Human
7 Genes
GS398322
LABEL: over and under-expressed apoptosis signal pathway genesDESCRIPTION: RNA-seq data was analyzed from peripheral blood of three healthy volunteers and two Covid 19 patients. These apoptosis signal pathway genes are over and under-expressed in the Covid 19 patients, from Fig. 5B.
Tier IV
Human
8 Genes
GS398323
LABEL: over and under-expressed p53 signaling pathway genesDESCRIPTION: RNA-seq data was analyzed from peripheral blood of three healthy volunteers and two Covid-19 patients. These p53 pathway genes are over or under-expressed in the Covid-19 patients, from Fig. 5C.
Tier IV
Human
14 Genes
GS398324
LABEL: over and under-expressed genes from peripheral blood cellsDESCRIPTION: Inflammatory cytokines with under or over-expression in peripheral blood samples COVID-19 patients compared to healthy volunteer samples from Fig. 4B.
Tier IV
Human
679 Genes
GS400150
LABEL: Up_in_Covid19_BALFDESCRIPTION: Genes significantly upregulated (p < 0.05) in bronchoalveolar lavage fluid (BALF) from SARS-CoV2 patients compared to healthy donors. Genes were taken from the BALF DEGs tab of Supplementary File 1 with value = "Up" in "Tag" column. Values are log2 fold change. Genes were entered as base Ensemble IDs. The following gene identifiers were not in GeneWeaver at the time of loading: ENSG00000285704, ENSG00000227081, ENSG00000264895, ENSG00000233762, ENSG00000277534, ENSG00000279166, ENSG00000264853, ENSG00000213197, ENSG00000287085, ENSG00000218175, ENSG00000279133, ENSG00000244313, ENSG00000229119, ENSG00000185641, ENSG00000259600, ENSG00000287613, ENSG00000242299, ENSG00000228655, ENSG00000279483, ENSG00000286545, ENSG00000236439, ENSG00000234287, ENSG00000251076, ENSG00000286830, ENSG00000253339, ENSG00000272211, ENSG00000244398, ENSG00000250461, ENSG00000185495, ENSG00000219023, ENSG00000228793, ENSG00000274173, ENSG00000279544, ENSG00000217130, ENSG00000231856, ENSG00000258752, ENSG00000178715, ENSG00000218426, ENSG00000227615, ENSG00000281383, ENSG00000214530.
Tier IV
Human
325 Genes
GS400153
LABEL: Down_in_Covid19_BALFDESCRIPTION: Genes significantly downregulated (p < 0.05) in bronchoalveolar lavage fluid (BALF) from SARS-CoV2 patients compared to healthy donors. Genes were taken from the BALF DEGs tab of Supplementary File 1 with value = "Down" in "Tag" column. Values are log2 fold change. Genes were entered as base Ensemble IDs.
Tier IV
Human
707 Genes
GS400154
LABEL: Up_in_Covid19_PBMCDESCRIPTION: Genes significantly upregulated (p < 0.05) in peripheral blood mononuclear cells (PBMC) specimens from SARS-CoV2 patients compared to healthy donors. Genes were taken from the PBMC DEGs tab of Supplementary File 1 with value = "Up" in "Tag" column. Values are log2 fold change. Genes were entered as base Ensemble IDs. The following gene identifiers were not in GeneWeaver at the time of loading: ENSG00000255306, ENSG00000235328, ENSG00000262202, ENSG00000279400, ENSG00000279227, ENSG00000186076, ENSG00000271122, ENSG00000287431, ENSG00000279605, ENSG00000235027, ENSG00000216285, ENSG00000247134, ENSG00000240859, ENSG00000251429, ENSG00000246731, ENSG00000250771, ENSG00000108958, ENSG00000264456, ENSG00000286194, ENSG00000276216, ENSG00000287979, ENSG00000259319, ENSG00000285646, ENSG00000272720, ENSG00000185839, ENSG00000274922, ENSG00000136315, ENSG00000230699, ENSG00000272825, ENSG00000270022.
Tier IV
Human
316 Genes
GS400155
LABEL: Down_in_Covid19_PBMCDESCRIPTION: Genes significantly downregulated (p < 0.05) in peripheral blood mononuclear cells (PBMC) specimens from SARS-CoV2 patients compared to healthy donors. Genes were taken from the PBMC DEGs tab of Supplementary File 1 with value = "Up" in "Tag" column. Values are log2 fold change. Genes were entered as base Ensemble IDs. The following gene identifiers were not in GeneWeaver at the time of loading: ENSG00000277739, ENSG00000236213, ENSG00000273824, ENSG00000285366, ENSG00000267523, ENSG00000260719, ENSG00000257176, ENSG00000261324, ENSG00000236449, ENSG00000279884, ENSG00000226380, ENSG00000276136, ENSG00000174171, ENSG00000260891, ENSG00000253736, ENSG00000253720, ENSG00000276853, ENSG00000279908, ENSG00000272256, ENSG00000273319, ENSG00000231858, ENSG00000286145, ENSG00000283674, ENSG00000284707, ENSG00000228655, ENSG00000251034, ENSG00000257802, ENSG00000278962, ENSG00000257277, ENSG00000233392, ENSG00000250696, ENSG00000287195, ENSG00000228140, ENSG00000231769, ENSG00000258875, ENSG00000273066, ENSG00000234156, ENSG00000273160, ENSG00000287218, ENSG00000273038, ENSG00000261208, ENSG00000287070, ENSG00000285847, ENSG00000234268, ENSG00000273284, ENSG00000287425, ENSG00000255545, ENSG00000264063, ENSG00000280614, ENSG00000281181, ENSG00000277437, ENSG00000280800, ENSG00000281383, ENSG00000268154, ENSG00000227598, ENSG00000285730.
Tier IV
Human
2 Genes
GS400156
LABEL: InflammatoryCytokines_Down_in_Covid19_BALFDESCRIPTION: Inflammatory cytokines significantly downregulated (p < 0.05) in bronchoalveolar lavage fluid (BALF) from SARS-CoV2 patients compared to healthy donors. Genes were taken from starred genes in Figure 4A and which have value = "Down" in "Tag" column of the BALF DEGs tab of Supplementary File 1. This tab is also the source of the values, which are log2 fold change and the gene IDs, which were entered as base Ensemble IDs.
Tier IV
Human
10 Genes
GS400157
LABEL: InflammatoryCytokines_Up_in_Covid19_BALFDESCRIPTION: Inflammatory cytokines significantly upregulated (p < 0.05) in bronchoalveolar lavage fluid (BALF) from SARS-CoV2 patients compared to healthy donors. Genes were taken from starred genes in Figure 4A and which have value = "Up" in "Tag" column of the BALF DEGs tab of Supplementary File 1. This tab is also the source of the values, which are log2 fold change and the gene IDs, which were entered as base Ensemble IDs.
Tier IV
Human
6 Genes
GS400158
LABEL: InflammatoryCytokines_Down_in_Covid19_PBMCDESCRIPTION: Inflammatory cytokines significantly downregulated (p < 0.05) in peripheral blood mononuclear cells (PBMC) specimens from SARS-CoV2 patients compared to healthy donors. Genes were taken from starred genes in Figure 4B and which have value = "Down" in "Tag" column of the PBMC DEGs tab of Supplementary File 1. This tab is also the source of the values, which are log2 fold change, and the gene IDs, which were entered as base Ensemble IDs.
Tier IV
Human
8 Genes
GS400159
LABEL: InflammatoryCytokines_Up_in_Covid19_PBMCDESCRIPTION: Inflammatory cytokines significantly upregulated (p < 0.05) in peripheral blood mononuclear cells (PBMC) specimens from SARS-CoV2 patients compared to healthy donors. Genes were taken from starred genes in Figure 4B and which have value = "Up" in "Tag" column of the PBMC DEGs tab of Supplementary File 1. This tab is also the source of the values, which are log2 fold change, and the gene IDs, which were entered as base Ensemble IDs.
Tier IV
Human
8 Genes
GS400160
LABEL: InflammatoryCytokines_Up_in_Covid19_PBMCDESCRIPTION: Inflammatory cytokines significantly upregulated (p < 0.05) in peripheral blood mononuclear cells (PBMC) specimens from SARS-CoV2 patients compared to healthy donors. Genes were taken from starred genes in Figure 4B and which have value = "Up" in "Tag" column of the PBMC DEGs tab of Supplementary File 1. This tab is also the source of the values, which are log2 fold change, and the gene IDs, which were entered as base Ensemble IDs.
Tier IV
Human
5 Genes
GS400175
LABEL: AutophagySignalingGenes_Up_in_Covid19_PBMCDESCRIPTION: Autophagy signaling pathway genes upregulated (p < 0.05) in peripheral blood mononuclear cells (PBMC) specimens from SARS-CoV2 patients compared to healthy donors. Genes were taken from starred genes in Figure 5A and which have value = "Up" in the "Tag" column of the PBMC DEGs tab of Supplementary File 1. This tab is also the source of the values, which are log2 fold change, and the gene IDs, which were entered as base Ensemble IDs.
Tier IV
Human
1 Genes
GS400176
LABEL: ApoptosisSignalingGenes_Down_in_Covid19_PBMCDESCRIPTION: Apoptosis signaling pathway genes downregulated (p < 0.05) in peripheral blood mononuclear cells (PBMC) specimens from SARS-CoV2 patients compared to healthy donors. Genes were taken from starred genes in Figure 5B and which have value = "Down" in the "Tag" column of the PBMC DEGs tab of Supplementary File 1. This tab is also the source of the values, which are log2 fold change, and the gene IDs, which were entered as base Ensemble IDs.
Tier IV
Human
6 Genes
GS400177
LABEL: ApoptosisSignalingGenes_Up_in_Covid19_PBMCDESCRIPTION: Apoptosis signaling pathway genes upregulated (p < 0.05) in peripheral blood mononuclear cells (PBMC) specimens from SARS-CoV2 patients compared to healthy donors. Genes were taken from starred genes in Figure 5B and which have value = "Up" in the "Tag" column of the PBMC DEGs tab of Supplementary File 1. This tab is also the source of the values, which are log2 fold change, and the gene IDs, which were entered as base Ensemble IDs.
Tier IV
Human
1 Genes
GS400178
LABEL: p53-signalingGenes_Down_in_Covid19_PBMCDESCRIPTION: p53 signaling pathway genes downregulated (p < 0.05) in peripheral blood mononuclear cells (PBMC) specimens from SARS-CoV2 patients compared to healthy donors. Genes were taken from starred genes in Figure 5C and which have value = "Down" in "Tag" column of the PBMC DEGs tab of Supplementary File 1. This tab is also the source of the values, which are log2 fold change, and the gene IDs, which were entered as base Ensemble IDs.
Tier IV
Human
7 Genes
GS400179
LABEL: p53-signalingGenes_Down_in_Covid19_PBMCDESCRIPTION: p53 signaling pathway genes upregulated (p < 0.05) in peripheral blood mononuclear cells (PBMC) specimens from SARS-CoV2 patients compared to healthy donors. Genes were taken from starred genes in Figure 5C and which have value = "Up" in "Tag" column of the PBMC DEGs tab of Supplementary File 1. This tab is also the source of the values, which are log2 fold change, and the gene IDs, which were entered as base Ensemble IDs.
GeneWeaver