GeneSet Information

Tier IV GS403640 • Control vs. alcohol withdrawal hippocampus

DESCRIPTION:

RNA-Seq was performed to discover gene expression changes in the hippocampus of rats in withdrawal from chronic alcohol exposure. RNA-Seq was performed on the hippocampus from control, ethanol (no withdrawal), and ethanol plus withdrawal (24 h) groups. The largest number of differentially expressed (DE) genes were in the control vs. withdrawal comparison (925 out of 18,118 detected; q < 0.1)

LABEL:

Hippocampus Alcohol Withdrawal

SCORE TYPE:

Q-Value

DATE ADDED:

2021-11-02

DATE UPDATED:

2021-11-02

SPECIES:

AUTHORS:

Wei-Yang Chen, Hu Chen, Kana Hamada, Eleonora Gatta, Ying Chen, Huaibo Zhang, Jenny Drnevich, Harish R Krishnan, Mark Maienschein-Cline, Dennis R Grayson, Subhash C Pandey, Amy W Lasek

TITLE:

Transcriptomics identifies STAT3 as a key regulator of hippocampal gene expression and anhedonia during withdrawal from chronic alcohol exposure.

JOURNAL:

Translational psychiatry 05 2021, Vol 11, pp. 298

ABSTRACT:

Alcohol use disorder (AUD) is highly comorbid with depression. Withdrawal from chronic alcohol drinking results in depression and understanding brain molecular mechanisms that drive withdrawal-related depression is important for finding new drug targets to treat these comorbid conditions. Here, we performed RNA sequencing of the rat hippocampus during withdrawal from chronic alcohol drinking to discover key signaling pathways involved in alcohol withdrawal-related depressive-like behavior. Data were analyzed by weighted gene co-expression network analysis to identify several modules of co-expressed genes that could have a common underlying regulatory mechanism. One of the hub, or highly interconnected, genes in module 1 that increased during alcohol withdrawal was the transcription factor, signal transducer and activator of transcription 3 (Stat3), a known regulator of immune gene expression. Total and phosphorylated (p)STAT3 protein levels were also increased in the hippocampus during withdrawal after chronic alcohol exposure. Further, pSTAT3 binding was enriched at the module 1 genes Gfap, Tnfrsf1a, and Socs3 during alcohol withdrawal. Notably, pSTAT3 and its target genes were elevated in the postmortem hippocampus of human subjects with AUD when compared with control subjects. To determine the behavioral relevance of STAT3 activation during alcohol withdrawal, we treated rats with the STAT3 inhibitor stattic and tested for sucrose preference as a measure of anhedonia. STAT3 inhibition alleviated alcohol withdrawal-induced anhedonia. These results demonstrate activation of STAT3 signaling in the hippocampus during alcohol withdrawal in rats and in human AUD subjects, and suggest that STAT3 could be a therapeutic target for reducing comorbid AUD and depression. PUBMED: 34016951
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Annotation Information


Study: SRP312578


gene expression (GO:0010467)

Gene List • 921 Genes

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