GeneSet Information

Tier II GS136317 • non-HDL QTL 4 (Nhdlq4, Published QTL Chr 10)

DESCRIPTION:

QTL associated with non-HDL QTL 4. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (121642455)

LABEL:

QTL-Nhdlq4-Mouse-Chr 10

SCORE TYPE:

Binary

DATE ADDED:

2012-04-02

DATE UPDATED:

2020-05-06

SPECIES:

AUTHORS:

Ishimori N, Li R, Kelmenson PM, Korstanje R, Walsh KA, Churchill GA, Forsman-Semb K, Paigen B

TITLE:

Quantitative trait loci that determine plasma lipids and obesity in C57BL/6J and 129S1/SvImJ inbred mice.

JOURNAL:

Journal of lipid research Sep 2004, Vol 45, pp. 1624-32

ABSTRACT:

The plasma lipid concentrations and obesity of C57BL/6J (B6) and 129S1/SvImJ (129) inbred mouse strains fed a high-fat diet containing 15% dairy fat, 1% cholesterol, and 0.5% cholic acid differ markedly. To identify the loci controlling these traits, we conducted a quantitative trait loci (QTL) analysis of 294 (B6 x 129) F(2) females fed a high-fat diet for 14 weeks. Non-HDL cholesterol concentrations were affected by five significant loci: Nhdlq1 [chromosome 8, peak centimorgan (cM) 38, logarithm of odds [LOD] 4.4); Nhdlq4 (chromosome 10, cM 70, LOD 4.0); Nhdlq5 (chromosome 6, cM 0) interacting with Nhdlq4; Nhdlq6 (chromosome 7, cM 10) interacting with Nhdlq1; and Nhdlq7 (chromosome 15, cM 0) interacting with Nhdlq4. Triglyceride (TG) concentrations were affected by three significant loci: Tgq1 (chromosome 18, cM 42, LOD 3.2) and Tgq2 (chromosome 9, cM 66) interacting with Tgq3 (chromosome 4, cM 58). Obesity measured by percentage of body fat mass and body mass index was affected by two significant loci: Obq16 (chromosome 8, cM 48, LOD 10.0) interacting with Obq18 (chromosome 9, cM 65). Knowing the genes for these QTL will enhance our understanding of obesity and lipid metabolism. PUBMED: 15210844
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Annotation Information

No sequence read archive data associated with this GeneSet.


Cholic Acid (D019826)
Chromosomes, Human, Pair 8 (D002898)
Body Mass Index (D015992)
Chromosomes (D002875)
Comprehension (D032882)
Quantitative Trait Loci (D040641)
Attention (D001288)
Cholesterol (D002784)
Adipose Tissue (D000273)
Mice, Inbred Strains (D008815)
Obesity (D009765)
Lipid Metabolism (D050356)
Metabolism (D008660)
adipose tissue (MA:0000009)
lipid metabolic process (GO:0006629)
metabolic process (GO:0008152)
chromosome (GO:0005694)

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