GeneSet Information

Tier II GS136148 • lithogenic gene 8 (Lith8, Published QTL Chr 4)

DESCRIPTION:

QTL associated with lithogenic gene 8. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (124048407)

LABEL:

QTL-Lith8-Mouse-Chr 4

SCORE TYPE:

Binary

DATE ADDED:

2012-04-02

DATE UPDATED:

2020-05-06

SPECIES:

AUTHORS:

Wittenburg H, Lyons MA, Li R, Churchill GA, Carey MC, Paigen B

TITLE:

FXR and ABCG5/ABCG8 as determinants of cholesterol gallstone formation from quantitative trait locus mapping in mice.

JOURNAL:

Gastroenterology Sep 2003, Vol 125, pp. 868-81

ABSTRACT:

Cholesterol gallstone formation is a complex genetic trait. To identify additional cholesterol gallstone susceptibility loci, we performed a quantitative trait locus analysis using an intercross of PERA/Ei and I/LnJ inbred strains of mice.Mice of both sexes were examined for gallstone weight and evaluated according to a scoring system for the physical chemistry of cholelithiasis during feeding of a lithogenic diet. Intercross offspring were genotyped, and linkage analysis was performed by interval mapping. Differences in messenger RNA expression of positional candidate genes were determined using reverse-transcription and real-time polymerase chain reaction.We identified significant loci associated with gallstone weight on chromosomes 10 and 4, named Lith7 and Lith8, respectively (both susceptibility alleles conferred by strain I/LnJ). Positional candidate genes with higher expression in I/LnJ mice are Fxr (official symbol, Nr1h4), encoding the nuclear bile salt receptor, on chromosome 10 and Shp1 (official symbol, Nr0b2), encoding the small heterodimer partner 1, on chromosome 4. A significant locus associated with gallstone score on chromosome 17, named Lith9 (susceptibility allele conferred by strain PERA/Ei), colocalizes with the genes Abcg5 and Abcg8 that encode the canalicular cholesterol transporter. Higher hepatic messenger RNA expression of Abcg5 and Abcg8 in strain PERA/Ei correlates positively with higher biliary cholesterol levels.Our findings suggest a primary role of the nuclear bile salt receptor FXR and the canalicular cholesterol transporter ABCG5/ABCG8 in the genetic susceptibility and pathogenesis of cholesterol cholelithiasis in these strains of inbred mice. PUBMED: 12949731
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Annotation Information

No sequence read archive data associated with this GeneSet.


Chromosomes, Human, Pair 4 (D002894)
Alleles (D000483)
Polymerase Chain Reaction (D016133)
Chromosomes (D002875)
Chromosomes, Human, Pair 10 (D002879)
Quantitative Trait Loci (D040641)
Gallstones (D042882)
RNA, Messenger (D012333)
Genetic Predisposition to Disease (D020022)
Chromosomes, Human, Pair 17 (D002886)
Chemistry, Physical (D002627)
Chemistry (D002621)
Cholesterol (D002784)
Mice, Inbred Strains (D008815)
Cholelithiasis (D002769)
gallstones (MP:0002830)
biosynthetic process (GO:0009058)
pathogenesis (GO:0009405)
chromosome (GO:0005694)

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