List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Cortical thickness. The EFO term cortical thickness was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Bone mineral density. The EFO term bone density was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Bone mineral density. The EFO term bone density was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
C Medina-Gomez, JP Kemp, K Estrada, J Eriksson, J Liu, S Reppe, DM Evans, DH Heppe, L Vandenput, L Herrera, SM Ring, CJ Kruithof, NJ Timpson, MC Zillikens, OK Olstad, HF Zheng, JB Richards, B St Pourcain, A Hofman, VW Jaddoe, GD Smith, M Lorentzon, KM Gautvik, AG Uitterlinden, R Brommage, C Ohlsson, JH Tobias, F Rivadeneira
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Bone mineral density. The EFO term bone density was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
L Zhang, HJ Choi, K Estrada, PJ Leo, J Li, YF Pei, Y Zhang, Y Lin, H Shen, YZ Liu, Y Liu, Y Zhao, JG Zhang, Q Tian, YP Wang, Y Han, S Ran, R Hai, XZ Zhu, S Wu, H Yan, X Liu, TL Yang, Y Guo, F Zhang, YF Guo, Y Chen, X Chen, L Tan, L Zhang, FY Deng, H Deng, F Rivadeneira, EL Duncan, JY Lee, BG Han, NH Cho, GC Nicholson, E McCloskey, R Eastell, RL Prince, JA Eisman, G Jones, IR Reid, PN Sambrook, EM Dennison, P Danoy, LM Yerges-Armstrong, EA Streeten, T Hu, S Xiang, CJ Papasian, MA Brown, CS Shin, AG Uitterlinden, HW Deng
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Pediatric bone mineral content (radius). The EFO term bone mineral content measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
A Chesi, JA Mitchell, HJ Kalkwarf, JP Bradfield, JM Lappe, SE McCormack, V Gilsanz, SE Oberfield, H Hakonarson, JA Shepherd, A Kelly, BS Zemel, SF Grant
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Bone properties (heel). The EFO term velocity of sound measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
A Moayyeri, YH Hsu, D Karasik, K Estrada, SM Xiao, C Nielson, P Srikanth, S Giroux, SG Wilson, HF Zheng, AV Smith, SR Pye, PJ Leo, A Teumer, JY Hwang, C Ohlsson, F McGuigan, RL Minster, C Hayward, JM Olmos, LP Lyytikäinen, JR Lewis, KM Swart, L Masi, C Oldmeadow, EG Holliday, S Cheng, NM van Schoor, NC Harvey, M Kruk, F del Greco M, W Igl, O Trummer, E Grigoriou, R Luben, CT Liu, Y Zhou, L Oei, C Medina-Gomez, J Zmuda, G Tranah, SJ Brown, FM Williams, N Soranzo, J Jakobsdottir, K Siggeirsdottir, KL Holliday, A Hannemann, MJ Go, M Garcia, O Polasek, M Laaksonen, K Zhu, AW Enneman, M McEvoy, R Peel, PC Sham, M Jaworski, Ã… Johansson, AA Hicks, P Pludowski, R Scott, RA Dhonukshe-Rutten, N van der Velde, M Kähönen, JS Viikari, H Sievänen, OT Raitakari, J González-MacÃas, JL Hernández, D Mellström, O Ljunggren, YS Cho, U Völker, M Nauck, G Homuth, H Völzke, R Haring, MA Brown, E McCloskey, GC Nicholson, R Eastell, JA Eisman, G Jones, IR Reid, EM Dennison, J Wark, S Boonen, D Vanderschueren, FC Wu, T Aspelund, JB Richards, D Bauer, A Hofman, KT Khaw, G Dedoussis, B Obermayer-Pietsch, U Gyllensten, PP Pramstaller, RS Lorenc, C Cooper, AW Kung, P Lips, M Alen, J Attia, ML Brandi, LC de Groot, T Lehtimäki, JA Riancho, H Campbell, Y Liu, TB Harris, K Akesson, M Karlsson, JY Lee, H Wallaschofski, EL Duncan, TW O'Neill, V Gudnason, TD Spector, F Rousseau, E Orwoll, SR Cummings, NJ Wareham, F Rivadeneira, AG Uitterlinden, RL Prince, DP Kiel, J Reeve, SK Kaptoge
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Bone properties (heel). The EFO term bone quantitative ultrasound measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
A Moayyeri, YH Hsu, D Karasik, K Estrada, SM Xiao, C Nielson, P Srikanth, S Giroux, SG Wilson, HF Zheng, AV Smith, SR Pye, PJ Leo, A Teumer, JY Hwang, C Ohlsson, F McGuigan, RL Minster, C Hayward, JM Olmos, LP Lyytikäinen, JR Lewis, KM Swart, L Masi, C Oldmeadow, EG Holliday, S Cheng, NM van Schoor, NC Harvey, M Kruk, F del Greco M, W Igl, O Trummer, E Grigoriou, R Luben, CT Liu, Y Zhou, L Oei, C Medina-Gomez, J Zmuda, G Tranah, SJ Brown, FM Williams, N Soranzo, J Jakobsdottir, K Siggeirsdottir, KL Holliday, A Hannemann, MJ Go, M Garcia, O Polasek, M Laaksonen, K Zhu, AW Enneman, M McEvoy, R Peel, PC Sham, M Jaworski, Ã… Johansson, AA Hicks, P Pludowski, R Scott, RA Dhonukshe-Rutten, N van der Velde, M Kähönen, JS Viikari, H Sievänen, OT Raitakari, J González-MacÃas, JL Hernández, D Mellström, O Ljunggren, YS Cho, U Völker, M Nauck, G Homuth, H Völzke, R Haring, MA Brown, E McCloskey, GC Nicholson, R Eastell, JA Eisman, G Jones, IR Reid, EM Dennison, J Wark, S Boonen, D Vanderschueren, FC Wu, T Aspelund, JB Richards, D Bauer, A Hofman, KT Khaw, G Dedoussis, B Obermayer-Pietsch, U Gyllensten, PP Pramstaller, RS Lorenc, C Cooper, AW Kung, P Lips, M Alen, J Attia, ML Brandi, LC de Groot, T Lehtimäki, JA Riancho, H Campbell, Y Liu, TB Harris, K Akesson, M Karlsson, JY Lee, H Wallaschofski, EL Duncan, TW O'Neill, V Gudnason, TD Spector, F Rousseau, E Orwoll, SR Cummings, NJ Wareham, F Rivadeneira, AG Uitterlinden, RL Prince, DP Kiel, J Reeve, SK Kaptoge
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Bone properties (heel). The EFO term bone density was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
A Moayyeri, YH Hsu, D Karasik, K Estrada, SM Xiao, C Nielson, P Srikanth, S Giroux, SG Wilson, HF Zheng, AV Smith, SR Pye, PJ Leo, A Teumer, JY Hwang, C Ohlsson, F McGuigan, RL Minster, C Hayward, JM Olmos, LP Lyytikäinen, JR Lewis, KM Swart, L Masi, C Oldmeadow, EG Holliday, S Cheng, NM van Schoor, NC Harvey, M Kruk, F del Greco M, W Igl, O Trummer, E Grigoriou, R Luben, CT Liu, Y Zhou, L Oei, C Medina-Gomez, J Zmuda, G Tranah, SJ Brown, FM Williams, N Soranzo, J Jakobsdottir, K Siggeirsdottir, KL Holliday, A Hannemann, MJ Go, M Garcia, O Polasek, M Laaksonen, K Zhu, AW Enneman, M McEvoy, R Peel, PC Sham, M Jaworski, Ã… Johansson, AA Hicks, P Pludowski, R Scott, RA Dhonukshe-Rutten, N van der Velde, M Kähönen, JS Viikari, H Sievänen, OT Raitakari, J González-MacÃas, JL Hernández, D Mellström, O Ljunggren, YS Cho, U Völker, M Nauck, G Homuth, H Völzke, R Haring, MA Brown, E McCloskey, GC Nicholson, R Eastell, JA Eisman, G Jones, IR Reid, EM Dennison, J Wark, S Boonen, D Vanderschueren, FC Wu, T Aspelund, JB Richards, D Bauer, A Hofman, KT Khaw, G Dedoussis, B Obermayer-Pietsch, U Gyllensten, PP Pramstaller, RS Lorenc, C Cooper, AW Kung, P Lips, M Alen, J Attia, ML Brandi, LC de Groot, T Lehtimäki, JA Riancho, H Campbell, Y Liu, TB Harris, K Akesson, M Karlsson, JY Lee, H Wallaschofski, EL Duncan, TW O'Neill, V Gudnason, TD Spector, F Rousseau, E Orwoll, SR Cummings, NJ Wareham, F Rivadeneira, AG Uitterlinden, RL Prince, DP Kiel, J Reeve, SK Kaptoge
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Bone mineral density (paediatric, skull). The EFO term bone density was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
JP Kemp, C Medina-Gomez, K Estrada, B St Pourcain, DH Heppe, NM Warrington, L Oei, SM Ring, CJ Kruithof, NJ Timpson, LE Wolber, S Reppe, K Gautvik, E Grundberg, B Ge, B van der Eerden, J van de Peppel, MA Hibbs, CL Ackert-Bicknell, K Choi, DL Koller, MJ Econs, FM Williams, T Foroud, MC Zillikens, C Ohlsson, A Hofman, AG Uitterlinden, G Davey Smith, VW Jaddoe, JH Tobias, F Rivadeneira, DM Evans
Striatum Gene Expression Correlates for HAND_BASELINE measured in BXD RI Females & Males obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The HAND_BASELINE measures Handling induced convulsion baseline under the domain Ethanol HIC. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Comparison of mean signals and standard deviation (sdv) of genes which were recently described as predictive for lymphatic metastasis in colorectal carcinomas [12], between 31 amplified RNA samples of colon carcinomas and 24 RNA samples of colon carcinomas not amplified prior to microarray hybridization.
Authors:
Croner RS, Lausen B, Schellerer V, Zeittraeger I, Wein A, Schildberg C, Papadopoulos T, Dimmler A, Hahn EG, Hohenberger W, Brueckl WM
QTL for morphine preference on Chr6 at NA (1.89 Mbp , Build 37)
Description:
morphine preference spans 0.00 - 26.89 Mbp (NCBI Build 37) on Chr6. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
QTL for METH responses for home cage activity on Chr6 at Met (13.99 Mbp , Build 37)
Description:
METH responses for home cage activity spans 0.00 - 38.99 Mbp (NCBI Build 37) on Chr6. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
Genes associated with Homo sapiens that interact with the MeSH term 'Arsenic' (D001151). Incorporates data from 87 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'irinotecan' (C051890). Incorporates data from 11 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'arsenite' (C015001). Incorporates data from 3 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Zinc Sulfate' (D019287). Incorporates data from 14 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Oryzias latipes that interact with the MeSH term 'Estradiol' (D004958). Incorporates data from 3 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term '7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide' (D015123). Incorporates data from 660 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Ovis aries that interact with the MeSH term 'Progesterone' (D011374). Incorporates data from 3 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'arsenic trioxide' (C006632). Incorporates data from 3 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Lithium Chloride' (D018021). Incorporates data from 11 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Valproic Acid' (D014635). Incorporates data from 1238 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Authors:
None
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