List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Psoriatic arthritis. The EFO term psoriatic arthritis was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
U Hüffmeier, S Uebe, AB Ekici, J Bowes, E Giardina, E Korendowych, K Juneblad, M Apel, R McManus, P Ho, IN Bruce, AW Ryan, F Behrens, J Lascorz, B Böhm, H Traupe, J Lohmann, C Gieger, HE Wichmann, C Herold, M Steffens, L Klareskog, TF Wienker, O Fitzgerald, GM Alenius, NJ McHugh, G Novelli, H Burkhardt, A Barton, A Reis
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Psoriasis. The EFO term psoriasis was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
E Ellinghaus, D Ellinghaus, PE Stuart, RP Nair, S Debrus, JV Raelson, M Belouchi, H Fournier, C Reinhard, J Ding, Y Li, T Tejasvi, J Gudjonsson, SW Stoll, JJ Voorhees, S Lambert, S Weidinger, B Eberlein, M Kunz, P Rahman, DD Gladman, C Gieger, HE Wichmann, TH Karlsen, G Mayr, M Albrecht, D Kabelitz, U Mrowietz, GR Abecasis, JT Elder, S Schreiber, M Weichenthal, A Franke
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Psoriasis vulgaris. The EFO term psoriasis vulgaris was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
PE Stuart, RP Nair, LC Tsoi, T Tejasvi, S Das, HM Kang, E Ellinghaus, V Chandran, K Callis-Duffin, R Ike, Y Li, X Wen, C Enerbäck, JE Gudjonsson, S Kõks, K Kingo, T Esko, U Mrowietz, A Reis, HE Wichmann, C Gieger, P Hoffmann, MM Nöthen, J Winkelmann, M Kunz, EG Moreta, PJ Mease, CT Ritchlin, AM Bowcock, GG Krueger, HW Lim, S Weidinger, M Weichenthal, JJ Voorhees, P Rahman, PK Gregersen, A Franke, DD Gladman, GR Abecasis, JT Elder
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Psoriatic arthritis. The EFO term psoriatic arthritis was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
PE Stuart, RP Nair, LC Tsoi, T Tejasvi, S Das, HM Kang, E Ellinghaus, V Chandran, K Callis-Duffin, R Ike, Y Li, X Wen, C Enerbäck, JE Gudjonsson, S Kõks, K Kingo, T Esko, U Mrowietz, A Reis, HE Wichmann, C Gieger, P Hoffmann, MM Nöthen, J Winkelmann, M Kunz, EG Moreta, PJ Mease, CT Ritchlin, AM Bowcock, GG Krueger, HW Lim, S Weidinger, M Weichenthal, JJ Voorhees, P Rahman, PK Gregersen, A Franke, DD Gladman, GR Abecasis, JT Elder
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Psoriasis. The EFO term psoriasis was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
A Strange, F Capon, CC Spencer, J Knight, ME Weale, MH Allen, A Barton, G Band, C Bellenguez, JG Bergboer, JM Blackwell, E Bramon, SJ Bumpstead, JP Casas, MJ Cork, A Corvin, P Deloukas, A Dilthey, A Duncanson, S Edkins, X Estivill, O Fitzgerald, C Freeman, E Giardina, E Gray, A Hofer, U Hüffmeier, SE Hunt, AD Irvine, J Jankowski, B Kirby, C Langford, J Lascorz, J Leman, S Leslie, L Mallbris, HS Markus, CG Mathew, WH McLean, R McManus, R Mössner, L Moutsianas, AT Naluai, FO Nestle, G Novelli, A Onoufriadis, CN Palmer, C Perricone, M Pirinen, R Plomin, SC Potter, RM Pujol, A Rautanen, E Riveira-Munoz, AW Ryan, W Salmhofer, L Samuelsson, SJ Sawcer, J Schalkwijk, CH Smith, M Ståhle, Z Su, R Tazi-Ahnini, H Traupe, AC Viswanathan, RB Warren, W Weger, K Wolk, N Wood, J Worthington, HS Young, PL Zeeuwen, A Hayday, AD Burden, CE Griffiths, J Kere, A Reis, G McVean, DM Evans, MA Brown, JN Barker, L Peltonen, P Donnelly, RC Trembath
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Depressive and manic episodes in bipolar disorder. The EFO term manic episode measurement, depressive episode measurement, bipolar disorder was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Depressive episodes in bipolar disorder. The EFO term depressive episode measurement, bipolar disorder was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Long noncoding RNAs (lncRNAs) that are upregulated in the ventral midbrain of human subjects with cocaine addiction. Post-mortem human ventral midbrain samples were collected, and lncRNA expression was evaluated via microarray analysis. Data taken from Table 2. Values presented are average fold difference. Data available from GEO with accession number GSE67281."
Authors:
Michael J Bannon, Candace L Savonen, Hui Jia, Fabien Dachet, Steven D Halter, Carl J Schmidt, Leonard Lipovich, Gregory Kapatos
Long noncoding RNAs (lncRNAs) that are downregulated in the ventral midbrain of human subjects with cocaine addiction. Post-mortem human ventral midbrain samples were collected, and lncRNA expression was evaluated via microarray analysis. Data taken from Table 2. Values presented are average fold difference. Data available from GEO with accession number GSE67281."
Authors:
Michael J Bannon, Candace L Savonen, Hui Jia, Fabien Dachet, Steven D Halter, Carl J Schmidt, Leonard Lipovich, Gregory Kapatos
Genes associated with Homo sapiens that interact with the MeSH term '(6-(4-(2-piperidin-1-ylethoxy)phenyl))-3-pyridin-4-ylpyrazolo(1,5-a)pyrimidine' (C516138). Incorporates data from 3 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term '4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide' (C459179). Incorporates data from 9 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Valproic Acid' (D014635). Incorporates data from 1238 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term '2,3-dimethylhydroquinone' (C516077). Incorporates data from 6043 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
chr6q21
Genes in cytogenetic band chr6q21
c1 - Positional genesets for each human chromosome and cytogenetic band.
Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections.
gene2msig v. 0.1.0
Last updated 2015.08.31
Members of the class of compounds composed of AMINO ACIDS joined together by peptide bonds between adjacent amino acids into linear, branched or cyclical structures. OLIGOPEPTIDES are composed of approximately 2-12 amino acids. Polypeptides are composed of approximately 13 or more amino acids. PROTEINS are linear polypeptides that are normally synthesized on RIBOSOMES.
Generated by gene2mesh v. 1.1.1
Linear POLYPEPTIDES that are synthesized on RIBOSOMES and may be further modified, crosslinked, cleaved, or assembled into complex proteins with several subunits. The specific sequence of AMINO ACIDS determines the shape the polypeptide will take, during PROTEIN FOLDING, and the function of the protein.
Generated by gene2mesh v. 1.1.1
Non-antibody proteins secreted by inflammatory leukocytes and some non-leukocytic cells, that act as intercellular mediators. They differ from classical hormones in that they are produced by a number of tissue or cell types rather than by specialized glands. They generally act locally in a paracrine or autocrine rather than endocrine manner.
Generated by gene2mesh v. 1.1.1
Heterogeneous group of arthritic diseases sharing clinical and radiologic features. They are associated with the HLA-B27 ANTIGEN and some with a triggering infection. Most involve the axial joints in the SPINE, particularly the SACROILIAC JOINT, but can also involve asymmetric peripheral joints. Subsets include ANKYLOSING SPONDYLITIS; REACTIVE ARTHRITIS; PSORIATIC ARTHRITIS; and others.
Generated by gene2mesh v. 1.1.1
The medium-sized, submetacentric human chromosomes, called group C in the human chromosome classification. This group consists of chromosome pairs 6, 7, 8, 9, 10, 11, and 12 and the X chromosome.
Generated by gene2mesh v. 1.1.1
A group of dermatoses with distinct morphologic features. The primary lesion is most commonly a papule, usually erythematous, with a variable degree of scaling on the surface. Plaques form through the coalescing of primary lesions.
Generated by gene2mesh v. 1.1.1
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