Tier
Species
Size
Attr.
GeneSet
Tier III
380
GS31782: Gene Expression Correlations with Hippocampus Consortium M430v2 (Jun06) RMA for Localization of genes affecting alcohol drinking in mice Phillips et al (1994).
Figure Label:
EtOH preference co-expression
Description:
Preference for 10% ethanol (g/kg) in tap water offered vs. tap water; means are the average of days 2 and 4 of a 4-day 24-hr access period by Phillips TJ , et al
Authors:
Phillips TJ, Crabbe JC, Metten P, Belknap JK
Tier II
685
GS83981: cocaine related behavior 12 (Cocrb12, Published QTL, Chr 11)
Figure Label:
QTL-Cocrb12-Chr11
Description:
cocaine related behavior 12 (Cocrb12) spans 85.558736 - 135.558736 Mbp (NCBI Build 37) on Chr 11. Obtained from MGI (http://www.informatics.jax.org) by searching for QTLs containing the keyword .
Authors:
Jones BC, Tarantino LM, Rodriguez LA, Reed CL, McClearn GE, Plomin R, Erwin VG
Tier II
747
GS84255: alcohol preference locus (Published QTL, Chr 11)
Figure Label:
QTL for alcohol preference locus on Chr11 at D11Mit35 (106.61 Mbp , Build 37)
Description:
alcohol preference locus spans 81.61 - 131.61 Mbp (NCBI Build 37) on Chr11. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
Authors:
Gill K, Desaulniers N, Desjardins P, Lake K
Tier I
3690
GS124427: butyraldehyde interacting with Homo sapiens associated genes (MeSH:C018475) in CTD
Figure Label:
butyraldehyde H.s.
Description:
Genes associated with Homo sapiens that interact with the MeSH term 'butyraldehyde' (C018475). Incorporates data from 7 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Authors:
None
Tier III
8148
GS128199: Alcohol Preference union of 86 Gene Sets
Figure Label:
Alcohol Preference Union
Description:
The union of alcohol preference experimental studies (Tier 3) from 86 gene sets.
Authors:
None
Tier III
3391
GS135132: bHR vs bLR genes different in Nucleus Acumbens
Figure Label:
Rat anxiety [NAc]
Description:
Analysis performed on raw data in GEO2R with default settings. These are derived sets from the publication data. The data is available in GEO, and was analyzed using default setting in their suite of tools. This allowed the production of age independent differential expression set to be created for bHR vs bLR by brain region. Something not presented in the paper.
Authors:
Clinton SM, Stead JD, Miller S, Watson SJ, Akil H
Tier III
3391
GS135133: bHR vs bLR genes different in Hippocampus
Figure Label:
Rat impulsivity [HPC]
Description:
Analysis performed on raw data in GEO2R with default settings. These are derived sets from the publication data. The data is available in GEO, and was analyzed using default setting in their suite of tools. This allowed the production of age independent differential expression set to be created for bHR vs bLR by brain region. Something not presented in the paper.
Authors:
Clinton SM, Stead JD, Miller S, Watson SJ, Akil H
Tier I
8576
GS212168: FC: Fasciola cinerea
Figure Label:
FC - ABA
Description:
Genes with particular expression in the Fasciola cinerea. Data represent fold expression difference in structure versus grey matter average expression.
Authors:
None
Tier II
442
GS223064: Mammary carcinoma susceptibility QTL 15 (Mcs15 Published QTL Chr 10)
Figure Label:
QTL-Mcs15-Rat-Chr 10
Description:
QTL Associated with Mammary tumor susceptibility. On Chromosome 10 with a LOD score= 4.5, p-value =. From a(n) of
Authors:
Cotroneo MS, Merry GM, Haag JD, Lan H, Shepel LA, Gould MN
Tier II
1624
GS223083: Collagen induced arthritis QTL 22 (Cia22 Published QTL Chr 10)
Figure Label:
QTL-Cia22-Rat-Chr 10
Description:
QTL Associated with Joint/bone inflammation. On Chromosome 10 with a LOD score= 8.9, p-value =. From a(n) of
Authors:
Joe B, Remmers EF, Dobbins DE, Salstrom JL, Furuya T, Dracheva S, Gulko PS, Cannon GW, Griffiths MM, Wilder RL
Tier II
1890
GS223091: Collagen induced arthritis QTL 20 (Cia20 Published QTL Chr 10)
Figure Label:
QTL-Cia20-Rat-Chr 10
Description:
QTL Associated with Joint/bone inflammation. On Chromosome 10 with a LOD score= 3.2, p-value =. From a(n) intercross of
Authors:
Joe B, Remmers EF, Dobbins DE, Salstrom JL, Furuya T, Dracheva S, Gulko PS, Cannon GW, Griffiths MM, Wilder RL
Tier II
409
GS223102: Blood pressure QTL 149 (Bp149 Published QTL Chr 10)
Figure Label:
QTL-Bp149-Rat-Chr 10
Description:
QTL Associated with Blood pressure. On Chromosome 10 with a LOD score= , p-value =1.00E-04. From a(n) of
Authors:
Palijan A, Lambert R, Dutil J, Sivo Z, Deng AY
Tier II
938
GS223141: Bone structure and strength QTL 25 (Bss25 Published QTL Chr 10)
Figure Label:
QTL-Bss25-Rat-Chr 10
Description:
QTL Associated with Bone structure. On Chromosome 10 with a LOD score= 10.96, p-value =1.00E-04. From a(n) intercross of
Authors:
Sun Q, Alam I, Liu L, Koller DL, Carr LG, Econs MJ, Foroud T, Turner CH
Tier II
449
GS223187: Non-insulin dependent diabetes mellitus QTL 49 (Niddm49 Published QTL Chr 10)
Figure Label:
QTL-Niddm49-Rat-Chr 10
Description:
QTL Associated with Glucose level. On Chromosome 10 with a LOD score= 4.41, p-value =. From a(n) intercross of OLETFxBN
Authors:
Watanabe TK, Okuno S, Oga K, Mizoguchi-Miyakita A, Tsuji A, Yamasaki Y, Hishigaki H, Kanemoto N, Takagi T, Takahashi E, Irie Y, Nakamura Y, Tanigami A
Tier II
675
GS223217: Glomerulus QTL 25 (Glom25 Published QTL Chr 10)
Figure Label:
QTL-Glom25-Rat-Chr 10
Description:
QTL Associated with Renal pathology. On Chromosome 10 with a LOD score= 3.5, p-value =. From a(n) intercross of
Authors:
Aitman TJ, Dong R, Vyse TJ, Norsworthy PJ, Johnson MD, Smith J, Mangion J, Roberton-Lowe C, Marshall AJ, Petretto E, Hodges MD, Bhangal G, Patel SG, Sheehan-Rooney K, Duda M, Cook PR, Evans DJ, Domin J, Flint J, Boyle JJ, Pusey CD, Cook HT
Tier II
886
GS223260: Neuroinflammation QTL 7 (Neuinf7 Published QTL Chr 10)
Figure Label:
QTL-Neuinf7-Rat-Chr 10
Description:
QTL Associated with Neuroinflammation. On Chromosome 10 with a LOD score= 3.4, p-value =. From a(n) of
Authors:
Diez M, Abdelmagid N, Harnesk K, Ström M, Lidman O, Swanberg M, Lindblom R, Al-Nimer F, Jagodic M, Olsson T, Piehl F
Tier II
938
GS223270: Bone structure and strength QTL 33 (Bss33 Published QTL Chr 10)
Figure Label:
QTL-Bss33-Rat-Chr 10
Description:
QTL Associated with Bone structure. On Chromosome 10 with a LOD score= 9.34, p-value =1.00E-04. From a(n) intercross of
Authors:
Sun Q, Alam I, Liu L, Koller DL, Carr LG, Econs MJ, Foroud T, Turner CH
Tier II
403
GS223376: Body weight QTL 57 (Bw57 Published QTL Chr 10)
Figure Label:
QTL-Bw57-Rat-Chr 10
Description:
QTL Associated with Body weight. On Chromosome 10 with a LOD score= 4.2, p-value =8.00E-04. From a(n) of
Authors:
Inomata H, Watanabe T, Iizuka Y, Liang YQ, Mashimo T, Nabika T, Ikeda K, Yanai K, Gotoda T, Yamori Y, Isobe M, Kato N
Tier II
997
GS223396: Experimental allergic encephalomyelitis QTL 18 (Eae18 Published QTL Chr 10)
Figure Label:
QTL-Eae18-Rat-Chr 10
Description:
QTL Associated with Brain/spinal cord inflammation. On Chromosome 10 with a LOD score= , p-value =2.00E-05. From a(n) of
Authors:
Jagodic M, Kornek B, Weissert R, Lassmann H, Olsson T, Dahlman I
Tier II
376
GS223415: Blood pressure QTL 186 (Bp186 Published QTL Chr 10)
Figure Label:
QTL-Bp186-Rat-Chr 10
Description:
QTL Associated with Blood pressure. On Chromosome 10 with a LOD score= 3.57, p-value =. From a(n) of
Authors:
Moreno C, Dumas P, Kaldunski ML, Tonellato PJ, Greene AS, Roman RJ, Cheng Q, Wang Z, Jacob HJ, Cowley AW Jr
Tier II
886
GS223460: Mammary carcinoma susceptibility QTL 7 (Mcs7 Published QTL Chr 10)
Figure Label:
QTL-Mcs7-Rat-Chr 10
Description:
QTL Associated with Mammary tumor susceptibility. On Chromosome 10 with a LOD score= 2.38, p-value =. From a(n) of
Authors:
Lan H, Kendziorski CM, Haag JD, Shepel LA, Newton MA, Gould MN
Tier II
184
GS223474: Pristane induced arthritis QTL 25 (Pia25 Published QTL Chr 10)
Figure Label:
QTL-Pia25-Rat-Chr 10
Description:
QTL Associated with Joint/bone inflammation. On Chromosome 10 with a LOD score= , p-value =. From a(n) of
Authors:
Brenner M, Meng HC, Yarlett NC, Joe B, Griffiths MM, Remmers EF, Wilder RL, Gulko PS
Tier II
938
GS223539: Bone mineral density QTL 57 (Bmd57 Published QTL Chr 10)
Figure Label:
QTL-Bmd57-Rat-Chr 10
Description:
QTL Associated with Bone mineral density. On Chromosome 10 with a LOD score= 9.8, p-value =1.00E-04. From a(n) intercross of
Authors:
Koller DL, Liu L, Alam I, Sun Q, Econs MJ, Foroud T, Turner CH
Tier II
1619
GS223555: Stress response QTL 5 (Stresp5 Published QTL Chr 10)
Figure Label:
QTL-Stresp5-Rat-Chr 10
Description:
QTL Associated with Hormone level. On Chromosome 10 with a LOD score= 2.99, p-value =2.50E-04. From a(n) of
Authors:
Potenza MN, Brodkin ES, Joe B, Luo X, Remmers EF, Wilder RL, Nestler EJ, Gelernter J
Tier II
934
GS223659: Body weight QTL 106 (Bw106 Published QTL Chr 10)
Figure Label:
QTL-Bw106-Rat-Chr 10
Description:
QTL Associated with Body weight. On Chromosome 10 with a LOD score= 0.3, p-value =0.47. From a(n) of
Authors:
Inomata H, Watanabe T, Iizuka Y, Liang YQ, Mashimo T, Nabika T, Ikeda K, Yanai K, Gotoda T, Yamori Y, Isobe M, Kato N
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