List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Obesity (early onset extreme). The EFO term obesity was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
A Scherag, C Dina, A Hinney, V Vatin, S Scherag, CI Vogel, TD Müller, H Grallert, HE Wichmann, B Balkau, B Heude, MR Jarvelin, AL Hartikainen, C Levy-Marchal, J Weill, J Delplanque, A Körner, W Kiess, P Kovacs, NW Rayner, I Prokopenko, MI McCarthy, H Schäfer, I Jarick, H Boeing, E Fisher, T Reinehr, J Heinrich, P Rzehak, D Berdel, M Borte, H Biebermann, H Krude, D Rosskopf, C Rimmbach, W Rief, T Fromme, M Klingenspor, A Schürmann, N Schulz, MM Nöthen, TW Mühleisen, R Erbel, KH Jöckel, S Moebus, T Boes, T Illig, P Froguel, J Hebebrand, D Meyre
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Schizophrenia. The EFO term schizophrenia was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
X Ma, W Deng, X Liu, M Li, Z Chen, Z He, Y Wang, Q Wang, X Hu, DA Collier, T Li
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Adiposity. The EFO term obesity was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
CM Lindgren, IM Heid, JC Randall, C Lamina, V Steinthorsdottir, L Qi, EK Speliotes, G Thorleifsson, CJ Willer, BM Herrera, AU Jackson, N Lim, P Scheet, N Soranzo, N Amin, YS Aulchenko, JC Chambers, A Drong, J Luan, HN Lyon, F Rivadeneira, S Sanna, NJ Timpson, MC Zillikens, JH Zhao, P Almgren, S Bandinelli, AJ Bennett, RN Bergman, LL Bonnycastle, SJ Bumpstead, SJ Chanock, L Cherkas, P Chines, L Coin, C Cooper, G Crawford, A Doering, A Dominiczak, AS Doney, S Ebrahim, P Elliott, MR Erdos, K Estrada, L Ferrucci, G Fischer, NG Forouhi, C Gieger, H Grallert, CJ Groves, S Grundy, C Guiducci, D Hadley, A Hamsten, AS Havulinna, A Hofman, R Holle, JW Holloway, T Illig, B Isomaa, LC Jacobs, K Jameson, P Jousilahti, F Karpe, J Kuusisto, J Laitinen, GM Lathrop, DA Lawlor, M Mangino, WL McArdle, T Meitinger, MA Morken, AP Morris, P Munroe, N Narisu, A Nordström, P Nordström, BA Oostra, CN Palmer, F Payne, JF Peden, I Prokopenko, F Renström, A Ruokonen, V Salomaa, MS Sandhu, LJ Scott, A Scuteri, K Silander, K Song, X Yuan, HM Stringham, AJ Swift, T Tuomi, M Uda, P Vollenweider, G Waeber, C Wallace, GB Walters, MN Weedon, JC Witteman, C Zhang, W Zhang, MJ Caulfield, FS Collins, G Davey Smith, IN Day, PW Franks, AT Hattersley, FB Hu, MR Jarvelin, A Kong, JS Kooner, M Laakso, E Lakatta, V Mooser, AD Morris, L Peltonen, NJ Samani, TD Spector, DP Strachan, T Tanaka, J Tuomilehto, AG Uitterlinden, CM van Duijn, NJ Wareham, Hugh Watkins, DM Waterworth, M Boehnke, P Deloukas, L Groop, DJ Hunter, U Thorsteinsdottir, D Schlessinger, HE Wichmann, TM Frayling, GR Abecasis, JN Hirschhorn, RJ Loos, K Stefansson, KL Mohlke, I Barroso, MI McCarthy
Striatum Gene Expression Correlates for LM_CUE_ACTIVITY measured in BXD RI Males obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The LM_CUE_ACTIVITY measures Activity in altered context during presentation of cue under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Striatum Gene Expression Correlates for LM_CUE_SUPPRESS measured in BXD RI Males obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The LM_CUE_SUPPRESS measures Suppression of activity in altered context under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
QTL for nicotine sensitivity on Chr14 at D14Mit155 (49.05 Mbp , Build 37)
Description:
nicotine sensitivity spans 24.05 - 74.05 Mbp (NCBI Build 37) on Chr14. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
QTL for METH responses for home cage activity on Chr14 at Gnrh (75.38 Mbp , Build 37)
Description:
METH responses for home cage activity spans 50.38 - 100.38 Mbp (NCBI Build 37) on Chr14. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
QTL for chronic alcohol withdrawal severity on Chr14 at D14mit160 (75.81 Mbp , Build 37)
Description:
chronic alcohol withdrawal severity spans 50.81 - 100.81 Mbp (NCBI Build 37) on Chr14. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
Authors:
Bergeson SE, Kyle Warren R, Crabbe JC, Metten P, Gene Erwin V, Belknap JK
QTL for METH responses for climbing on Chr14 at Es10 (78.19 Mbp , Build 37)
Description:
METH responses for climbing spans 53.19 - 103.19 Mbp (NCBI Build 37) on Chr14. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
Genes associated with Homo sapiens that interact with the MeSH term 'Arsenic' (D001151). Incorporates data from 87 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Oryctolagus cuniculus that interact with the MeSH term 'Ionomycin' (D015759). Incorporates data from 6 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Paraquat' (D010269). Incorporates data from 793 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term '2-(4-amino-3-methylphenyl)-5-fluorobenzothiazole' (C425784). Incorporates data from 1 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Vitamin E' (D014810). Incorporates data from 6 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'resveratrol' (C059514). Incorporates data from 16 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Carbon' (D002244). Incorporates data from 6 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Copper Sulfate' (D019327). Incorporates data from 72 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Dimethyl Sulfoxide' (D004121). Incorporates data from 3 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Carbamazepine' (D002220). Incorporates data from 1 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with nan that interact with the MeSH term 'Methionine' (D008715). Incorporates data from 7 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
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