List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Neuroblastoma. The EFO term neuroblastoma was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
SJ Diskin, M Capasso, RW Schnepp, KA Cole, EF Attiyeh, C Hou, M Diamond, EL Carpenter, C Winter, H Lee, J Jagannathan, V Latorre, A Iolascon, H Hakonarson, M Devoto, JM Maris
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Menarche (age at onset). The EFO term age at menarche was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
KK Ong, CE Elks, S Li, JH Zhao, J Luan, LB Andersen, SA Bingham, S Brage, GD Smith, U Ekelund, CJ Gillson, B Glaser, J Golding, R Hardy, KT Khaw, D Kuh, R Luben, M Marcus, MA McGeehin, AR Ness, K Northstone, SM Ring, C Rubin, MA Sims, K Song, DP Strachan, P Vollenweider, G Waeber, DM Waterworth, A Wong, P Deloukas, I Barroso, V Mooser, RJ Loos, NJ Wareham
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Digit length ratio. The EFO term digit length ratio was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
SE Medland, T Zayats, B Glaser, DR Nyholt, SD Gordon, MJ Wright, GW Montgomery, MJ Campbell, AK Henders, NJ Timpson, L Peltonen, D Wolke, SM Ring, P Deloukas, NG Martin, GD Smith, DM Evans
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Pubertal anthropometrics. The EFO term puberty, height growth measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
DL Cousminer, DJ Berry, NJ Timpson, W Ang, E Thiering, EM Byrne, HR Taal, V Huikari, JP Bradfield, M Kerkhof, MM Groen-Blokhuis, E Kreiner-Møller, M Marinelli, C Holst, JT Leinonen, JR Perry, I Surakka, O Pietiläinen, J Kettunen, V Anttila, M Kaakinen, U Sovio, A Pouta, S Das, V Lagou, C Power, I Prokopenko, DM Evans, JP Kemp, B St Pourcain, S Ring, A Palotie, E Kajantie, C Osmond, T Lehtimäki, JS Viikari, M Kähönen, NM Warrington, SJ Lye, LJ Palmer, CM Tiesler, C Flexeder, GW Montgomery, SE Medland, A Hofman, H Hakonarson, M Guxens, M Bartels, V Salomaa, JM Murabito, J Kaprio, TI Sørensen, F Ballester, H Bisgaard, DI Boomsma, GH Koppelman, SF Grant, VW Jaddoe, NG Martin, J Heinrich, CE Pennell, OT Raitakari, JG Eriksson, GD Smith, E Hyppönen, MR Järvelin, MI McCarthy, S Ripatti, E Widén
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Menarche (age at onset). The EFO term age at menarche was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
CE Elks, JR Perry, P Sulem, DI Chasman, N Franceschini, C He, KL Lunetta, JA Visser, EM Byrne, DL Cousminer, DF Gudbjartsson, T Esko, B Feenstra, JJ Hottenga, DL Koller, Z Kutalik, P Lin, M Mangino, M Marongiu, PF McArdle, AV Smith, L Stolk, SH van Wingerden, JH Zhao, E Albrecht, T Corre, E Ingelsson, C Hayward, PK Magnusson, EN Smith, S Ulivi, NM Warrington, L Zgaga, H Alavere, N Amin, T Aspelund, S Bandinelli, I Barroso, GS Berenson, S Bergmann, H Blackburn, E Boerwinkle, JE Buring, F Busonero, H Campbell, SJ Chanock, W Chen, MC Cornelis, D Couper, AD Coviello, P d'Adamo, U de Faire, EJ de Geus, P Deloukas, A Döring, GD Smith, DF Easton, G Eiriksdottir, V Emilsson, J Eriksson, L Ferrucci, AR Folsom, T Foroud, M Garcia, P Gasparini, F Geller, C Gieger, V Gudnason, P Hall, SE Hankinson, L Ferreli, AC Heath, DG Hernandez, A Hofman, FB Hu, T Illig, MR Järvelin, AD Johnson, D Karasik, KT Khaw, DP Kiel, TO Kilpeläinen, I Kolcic, P Kraft, LJ Launer, JS Laven, S Li, J Liu, D Levy, NG Martin, WL McArdle, M Melbye, V Mooser, JC Murray, SS Murray, MA Nalls, P Navarro, M Nelis, AR Ness, K Northstone, BA Oostra, M Peacock, LJ Palmer, A Palotie, G Paré, AN Parker, NL Pedersen, L Peltonen, CE Pennell, P Pharoah, O Polasek, AS Plump, A Pouta, E Porcu, T Rafnar, JP Rice, SM Ring, F Rivadeneira, I Rudan, C Sala, V Salomaa, S Sanna, D Schlessinger, NJ Schork, A Scuteri, AV Segrè, AR Shuldiner, N Soranzo, U Sovio, SR Srinivasan, DP Strachan, ML Tammesoo, E Tikkanen, D Toniolo, K Tsui, L Tryggvadottir, J Tyrer, M Uda, RM van Dam, JB van Meurs, P Vollenweider, G Waeber, NJ Wareham, DM Waterworth, MN Weedon, HE Wichmann, G Willemsen, JF Wilson, AF Wright, L Young, G Zhai, WV Zhuang, LJ Bierut, DI Boomsma, HA Boyd, L Crisponi, EW Demerath, CM van Duijn, MJ Econs, TB Harris, DJ Hunter, RJ Loos, A Metspalu, GW Montgomery, PM Ridker, TD Spector, EA Streeten, K Stefansson, U Thorsteinsdottir, AG Uitterlinden, E Widen, JM Murabito, KK Ong, A Murray
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Menarche (age at onset). The EFO term age at menarche was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
JR Perry, L Stolk, N Franceschini, KL Lunetta, G Zhai, PF McArdle, AV Smith, T Aspelund, S Bandinelli, E Boerwinkle, L Cherkas, G Eiriksdottir, K Estrada, L Ferrucci, AR Folsom, M Garcia, V Gudnason, A Hofman, D Karasik, DP Kiel, LJ Launer, J van Meurs, MA Nalls, F Rivadeneira, AR Shuldiner, A Singleton, N Soranzo, T Tanaka, JA Visser, MN Weedon, SG Wilson, V Zhuang, EA Streeten, TB Harris, A Murray, TD Spector, EW Demerath, AG Uitterlinden, JM Murabito
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Menarche (age at onset). The EFO term age at menarche was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
P Sulem, DF Gudbjartsson, T Rafnar, H Holm, EJ Olafsdottir, GH Olafsdottir, T Jonsson, P Alexandersen, B Feenstra, HA Boyd, KK Aben, AL Verbeek, N Roeleveld, A Jonasdottir, U Styrkarsdottir, V Steinthorsdottir, A Karason, SN Stacey, J Gudmundsson, M Jakobsdottir, G Thorleifsson, G Hardarson, J Gulcher, A Kong, LA Kiemeney, M Melbye, C Christiansen, L Tryggvadottir, U Thorsteinsdottir, K Stefansson
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Menarche and menopause (age at onset). The EFO term age at menarche was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
C He, P Kraft, C Chen, JE Buring, G Paré, SE Hankinson, SJ Chanock, PM Ridker, DJ Hunter, DI Chasman
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Menarche (age at onset). The EFO term age at menarche was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
C Tanikawa, Y Okada, A Takahashi, K Oda, N Kamatani, M Kubo, Y Nakamura, K Matsuda
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Height. The EFO term body height was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
M He, M Xu, B Zhang, J Liang, P Chen, JY Lee, TA Johnson, H Li, X Yang, J Dai, L Liang, L Gui, Q Qi, J Huang, Y Li, LS Adair, T Aung, Q Cai, CY Cheng, MC Cho, YS Cho, M Chu, B Cui, YT Gao, MJ Go, D Gu, W Gu, H Guo, Y Hao, J Hong, Z Hu, Y Hu, J Huang, JY Hwang, MK Ikram, G Jin, DH Kang, CC Khor, BJ Kim, HT Kim, M Kubo, J Lee, J Lee, NR Lee, R Li, J Li, J Liu, J Longe, W Lu, X Lu, X Miao, Y Okada, RT Ong, G Qiu, M Seielstad, X Sim, H Song, F Takeuchi, T Tanaka, PR Taylor, L Wang, W Wang, Y Wang, C Wu, Y Wu, YB Xiang, K Yamamoto, H Yang, M Liao, M Yokota, T Young, X Zhang, N Kato, QK Wang, W Zheng, FB Hu, D Lin, H Shen, YY Teo, Z Mo, TY Wong, X Lin, KL Mohlke, G Ning, T Tsunoda, BG Han, XO Shu, ES Tai, T Wu, L Qi
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Pubertal anthropometrics. The EFO term body height was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
DL Cousminer, DJ Berry, NJ Timpson, W Ang, E Thiering, EM Byrne, HR Taal, V Huikari, JP Bradfield, M Kerkhof, MM Groen-Blokhuis, E Kreiner-Møller, M Marinelli, C Holst, JT Leinonen, JR Perry, I Surakka, O Pietiläinen, J Kettunen, V Anttila, M Kaakinen, U Sovio, A Pouta, S Das, V Lagou, C Power, I Prokopenko, DM Evans, JP Kemp, B St Pourcain, S Ring, A Palotie, E Kajantie, C Osmond, T Lehtimäki, JS Viikari, M Kähönen, NM Warrington, SJ Lye, LJ Palmer, CM Tiesler, C Flexeder, GW Montgomery, SE Medland, A Hofman, H Hakonarson, M Guxens, M Bartels, V Salomaa, JM Murabito, J Kaprio, TI Sørensen, F Ballester, H Bisgaard, DI Boomsma, GH Koppelman, SF Grant, VW Jaddoe, NG Martin, J Heinrich, CE Pennell, OT Raitakari, JG Eriksson, GD Smith, E Hyppönen, MR Järvelin, MI McCarthy, S Ripatti, E Widén
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Height. The EFO term body height was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
H Lango Allen, K Estrada, G Lettre, SI Berndt, MN Weedon, F Rivadeneira, CJ Willer, AU Jackson, S Vedantam, S Raychaudhuri, T Ferreira, AR Wood, RJ Weyant, AV Segrè, EK Speliotes, E Wheeler, N Soranzo, JH Park, J Yang, D Gudbjartsson, NL Heard-Costa, JC Randall, L Qi, A Vernon Smith, R Mägi, T Pastinen, L Liang, IM Heid, J Luan, G Thorleifsson, TW Winkler, ME Goddard, K Sin Lo, C Palmer, T Workalemahu, YS Aulchenko, A Johansson, MC Zillikens, MF Feitosa, T Esko, T Johnson, S Ketkar, P Kraft, M Mangino, I Prokopenko, D Absher, E Albrecht, F Ernst, NL Glazer, C Hayward, JJ Hottenga, KB Jacobs, JW Knowles, Z Kutalik, KL Monda, O Polasek, M Preuss, NW Rayner, NR Robertson, V Steinthorsdottir, JP Tyrer, BF Voight, F Wiklund, J Xu, JH Zhao, DR Nyholt, N Pellikka, M Perola, JR Perry, I Surakka, ML Tammesoo, EL Altmaier, N Amin, T Aspelund, T Bhangale, G Boucher, DI Chasman, C Chen, L Coin, MN Cooper, AL Dixon, Q Gibson, E Grundberg, K Hao, M Juhani Junttila, LM Kaplan, J Kettunen, IR König, T Kwan, RW Lawrence, DF Levinson, M Lorentzon, B McKnight, AP Morris, M Müller, J Suh Ngwa, S Purcell, S Rafelt, RM Salem, E Salvi, S Sanna, J Shi, U Sovio, JR Thompson, MC Turchin, L Vandenput, DJ Verlaan, V Vitart, CC White, A Ziegler, P Almgren, AJ Balmforth, H Campbell, L Citterio, A De Grandi, A Dominiczak, J Duan, P Elliott, R Elosua, JG Eriksson, NB Freimer, EJ Geus, N Glorioso, S Haiqing, AL Hartikainen, AS Havulinna, AA Hicks, J Hui, W Igl, T Illig, A Jula, E Kajantie, TO Kilpeläinen, M Koiranen, I Kolcic, S Koskinen, P Kovacs, J Laitinen, J Liu, ML Lokki, A Marusic, A Maschio, T Meitinger, A Mulas, G Paré, AN Parker, JF Peden, A Petersmann, I Pichler, KH Pietiläinen, A Pouta, M Ridderstråle, JI Rotter, JG Sambrook, AR Sanders, CO Schmidt, J Sinisalo, JH Smit, HM Stringham, G Bragi Walters, E Widen, SH Wild, G Willemsen, L Zagato, L Zgaga, P Zitting, H Alavere, M Farrall, WL McArdle, M Nelis, MJ Peters, S Ripatti, JB van Meurs, KK Aben, KG Ardlie, JS Beckmann, JP Beilby, RN Bergman, S Bergmann, FS Collins, D Cusi, M den Heijer, G Eiriksdottir, PV Gejman, AS Hall, A Hamsten, HV Huikuri, C Iribarren, M Kähönen, J Kaprio, S Kathiresan, L Kiemeney, T Kocher, LJ Launer, T Lehtimäki, O Melander, TH Mosley, AW Musk, MS Nieminen, CJ O'Donnell, C Ohlsson, B Oostra, LJ Palmer, O Raitakari, PM Ridker, JD Rioux, A Rissanen, C Rivolta, H Schunkert, AR Shuldiner, DS Siscovick, M Stumvoll, A Tönjes, J Tuomilehto, GJ van Ommen, J Viikari, AC Heath, NG Martin, GW Montgomery, MA Province, M Kayser, AM Arnold, LD Atwood, E Boerwinkle, SJ Chanock, P Deloukas, C Gieger, H Grönberg, P Hall, AT Hattersley, C Hengstenberg, W Hoffman, GM Lathrop, V Salomaa, S Schreiber, M Uda, D Waterworth, AF Wright, TL Assimes, I Barroso, A Hofman, KL Mohlke, DI Boomsma, MJ Caulfield, LA Cupples, J Erdmann, CS Fox, V Gudnason, U Gyllensten, TB Harris, RB Hayes, MR Jarvelin, V Mooser, PB Munroe, WH Ouwehand, BW Penninx, PP Pramstaller, T Quertermous, I Rudan, NJ Samani, TD Spector, H Völzke, H Watkins, JF Wilson, LC Groop, T Haritunians, FB Hu, RC Kaplan, A Metspalu, KE North, D Schlessinger, NJ Wareham, DJ Hunter, JR O'Connell, DP Strachan, HE Wichmann, IB Borecki, CM van Duijn, EE Schadt, U Thorsteinsdottir, L Peltonen, AG Uitterlinden, PM Visscher, N Chatterjee, RJ Loos, M Boehnke, MI McCarthy, E Ingelsson, CM Lindgren, GR Abecasis, K Stefansson, TM Frayling, JN Hirschhorn
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Height. The EFO term body height was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
SI Berndt, S Gustafsson, R Mägi, A Ganna, E Wheeler, MF Feitosa, AE Justice, KL Monda, DC Croteau-Chonka, FR Day, T Esko, T Fall, T Ferreira, D Gentilini, AU Jackson, J Luan, JC Randall, S Vedantam, CJ Willer, TW Winkler, AR Wood, T Workalemahu, YJ Hu, SH Lee, L Liang, DY Lin, JL Min, BM Neale, G Thorleifsson, J Yang, E Albrecht, N Amin, JL Bragg-Gresham, G Cadby, M den Heijer, N Eklund, K Fischer, A Goel, JJ Hottenga, JE Huffman, I Jarick, Å Johansson, T Johnson, S Kanoni, ME Kleber, IR König, K Kristiansson, Z Kutalik, C Lamina, C Lecoeur, G Li, M Mangino, WL McArdle, C Medina-Gomez, M Müller-Nurasyid, JS Ngwa, IM Nolte, L Paternoster, S Pechlivanis, M Perola, MJ Peters, M Preuss, LM Rose, J Shi, D Shungin, AV Smith, RJ Strawbridge, I Surakka, A Teumer, MD Trip, J Tyrer, JV Van Vliet-Ostaptchouk, L Vandenput, LL Waite, JH Zhao, D Absher, FW Asselbergs, M Atalay, AP Attwood, AJ Balmforth, H Basart, J Beilby, LL Bonnycastle, P Brambilla, M Bruinenberg, H Campbell, DI Chasman, PS Chines, FS Collins, JM Connell, WO Cookson, U de Faire, F de Vegt, M Dei, M Dimitriou, S Edkins, K Estrada, DM Evans, M Farrall, MM Ferrario, J Ferrières, L Franke, F Frau, PV Gejman, H Grallert, H Grönberg, V Gudnason, AS Hall, P Hall, AL Hartikainen, C Hayward, NL Heard-Costa, AC Heath, J Hebebrand, G Homuth, FB Hu, SE Hunt, E Hyppönen, C Iribarren, KB Jacobs, JO Jansson, A Jula, M Kähönen, S Kathiresan, F Kee, KT Khaw, M Kivimäki, W Koenig, AT Kraja, M Kumari, K Kuulasmaa, J Kuusisto, JH Laitinen, TA Lakka, C Langenberg, LJ Launer, L Lind, J Lindström, J Liu, A Liuzzi, ML Lokki, M Lorentzon, PA Madden, PK Magnusson, P Manunta, D Marek, W März, I Mateo Leach, B McKnight, SE Medland, E Mihailov, L Milani, GW Montgomery, V Mooser, TW Mühleisen, PB Munroe, AW Musk, N Narisu, G Navis, G Nicholson, EA Nohr, KK Ong, BA Oostra, CN Palmer, A Palotie, JF Peden, N Pedersen, A Peters, O Polasek, A Pouta, PP Pramstaller, I Prokopenko, C Pütter, A Radhakrishnan, O Raitakari, A Rendon, F Rivadeneira, I Rudan, TE Saaristo, JG Sambrook, AR Sanders, S Sanna, J Saramies, S Schipf, S Schreiber, H Schunkert, SY Shin, S Signorini, J Sinisalo, B Skrobek, N Soranzo, A Stančáková, K Stark, JC Stephens, K Stirrups, RP Stolk, M Stumvoll, AJ Swift, EV Theodoraki, B Thorand, DA Tregouet, E Tremoli, MM Van der Klauw, JB van Meurs, SH Vermeulen, J Viikari, J Virtamo, V Vitart, G Waeber, Z Wang, E Widén, SH Wild, G Willemsen, BR Winkelmann, JC Witteman, BH Wolffenbuttel, A Wong, AF Wright, MC Zillikens, P Amouyel, BO Boehm, E Boerwinkle, DI Boomsma, MJ Caulfield, SJ Chanock, LA Cupples, D Cusi, GV Dedoussis, J Erdmann, JG Eriksson, PW Franks, P Froguel, C Gieger, U Gyllensten, A Hamsten, TB Harris, C Hengstenberg, AA Hicks, A Hingorani, A Hinney, A Hofman, KG Hovingh, K Hveem, T Illig, MR Jarvelin, KH Jöckel, SM Keinanen-Kiukaanniemi, LA Kiemeney, D Kuh, M Laakso, T Lehtimäki, DF Levinson, NG Martin, A Metspalu, AD Morris, MS Nieminen, I Njølstad, C Ohlsson, AJ Oldehinkel, WH Ouwehand, LJ Palmer, B Penninx, C Power, MA Province, BM Psaty, L Qi, R Rauramaa, PM Ridker, S Ripatti, V Salomaa, NJ Samani, H Snieder, TI Sørensen, TD Spector, K Stefansson, A Tönjes, J Tuomilehto, AG Uitterlinden, M Uusitupa, P van der Harst, P Vollenweider, H Wallaschofski, NJ Wareham, H Watkins, HE Wichmann, JF Wilson, GR Abecasis, TL Assimes, I Barroso, M Boehnke, IB Borecki, P Deloukas, CS Fox, T Frayling, LC Groop, T Haritunian, IM Heid, D Hunter, RC Kaplan, F Karpe, MF Moffatt, KL Mohlke, JR O'Connell, Y Pawitan, EE Schadt, D Schlessinger, V Steinthorsdottir, DP Strachan, U Thorsteinsdottir, CM van Duijn, PM Visscher, AM Di Blasio, JN Hirschhorn, CM Lindgren, AP Morris, D Meyre, A Scherag, MI McCarthy, EK Speliotes, KE North, RJ Loos, E Ingelsson
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Puberty onset. The EFO term puberty onset measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
DL Cousminer, E Stergiakouli, DJ Berry, W Ang, MM Groen-Blokhuis, A Körner, N Siitonen, I Ntalla, M Marinelli, JR Perry, J Kettunen, R Jansen, I Surakka, NJ Timpson, S Ring, G Mcmahon, C Power, C Wang, M Kähönen, J Viikari, T Lehtimäki, CM Middeldorp, HE Hulshoff Pol, M Neef, S Weise, K Pahkala, H Niinikoski, E Zeggini, K Panoutsopoulou, M Bustamante, BW Penninx, J Murabito, M Torrent, GV Dedoussis, W Kiess, DI Boomsma, CE Pennell, OT Raitakari, E Hyppönen, G Davey Smith, S Ripatti, MI McCarthy, E Widén
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Menarche (age at onset). The EFO term age at menarche was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
JR Perry, F Day, CE Elks, P Sulem, DJ Thompson, T Ferreira, C He, DI Chasman, T Esko, G Thorleifsson, E Albrecht, WQ Ang, T Corre, DL Cousminer, B Feenstra, N Franceschini, A Ganna, AD Johnson, S Kjellqvist, KL Lunetta, G McMahon, IM Nolte, L Paternoster, E Porcu, AV Smith, L Stolk, A Teumer, N Tšernikova, E Tikkanen, S Ulivi, EK Wagner, N Amin, LJ Bierut, EM Byrne, JJ Hottenga, DL Koller, M Mangino, TH Pers, LM Yerges-Armstrong, J Hua Zhao, IL Andrulis, H Anton-Culver, F Atsma, S Bandinelli, MW Beckmann, J Benitez, C Blomqvist, SE Bojesen, MK Bolla, B Bonanni, H Brauch, H Brenner, JE Buring, J Chang-Claude, S Chanock, J Chen, G Chenevix-Trench, JM Collée, FJ Couch, D Couper, AD Coviello, A Cox, K Czene, AP D'adamo, G Davey Smith, I De Vivo, EW Demerath, J Dennis, P Devilee, AK Dieffenbach, AM Dunning, G Eiriksdottir, JG Eriksson, PA Fasching, L Ferrucci, D Flesch-Janys, H Flyger, T Foroud, L Franke, ME Garcia, M García-Closas, F Geller, EE de Geus, GG Giles, DF Gudbjartsson, V Gudnason, P Guénel, S Guo, P Hall, U Hamann, R Haring, CA Hartman, AC Heath, A Hofman, MJ Hooning, JL Hopper, FB Hu, DJ Hunter, D Karasik, DP Kiel, JA Knight, VM Kosma, Z Kutalik, S Lai, D Lambrechts, A Lindblom, R Mägi, PK Magnusson, A Mannermaa, NG Martin, G Masson, PF McArdle, WL McArdle, M Melbye, K Michailidou, E Mihailov, L Milani, RL Milne, H Nevanlinna, P Neven, EA Nohr, AJ Oldehinkel, BA Oostra, A Palotie, M Peacock, NL Pedersen, P Peterlongo, J Peto, PD Pharoah, DS Postma, A Pouta, K Pylkäs, P Radice, S Ring, F Rivadeneira, A Robino, LM Rose, A Rudolph, V Salomaa, S Sanna, D Schlessinger, MK Schmidt, MC Southey, U Sovio, MJ Stampfer, D Stöckl, AM Storniolo, NJ Timpson, J Tyrer, JA Visser, P Vollenweider, H Völzke, G Waeber, M Waldenberger, H Wallaschofski, Q Wang, G Willemsen, R Winqvist, BH Wolffenbuttel, MJ Wright, DI Boomsma, MJ Econs, KT Khaw, RJ Loos, MI McCarthy, GW Montgomery, JP Rice, EA Streeten, U Thorsteinsdottir, CM van Duijn, BZ Alizadeh, S Bergmann, E Boerwinkle, HA Boyd, L Crisponi, P Gasparini, C Gieger, TB Harris, E Ingelsson, MR Järvelin, P Kraft, D Lawlor, A Metspalu, CE Pennell, PM Ridker, H Snieder, TI Sørensen, TD Spector, DP Strachan, AG Uitterlinden, NJ Wareham, E Widen, M Zygmunt, A Murray, DF Easton, K Stefansson, JM Murabito, KK Ong
The total transcriptome including genes that are differentially expressed in cocaine addicts compared to control subjects. Post-mortem brain samples were collected from the dorsolateral prefrontal cortex (dlPFC) of the cocaine addict group and the control group. To assess gene expression, RNA-seq was performed. Data taken from Supplementary Table 2. Values presented are k.diff values. Data available from GEO with accession number GSE99349."
Authors:
Efrain A Ribeiro, Joseph R Scarpa, Susanna P Garamszegi, Andrew Kasarskis, Deborah C Mash, Eric J Nestler
Data from GEO GSE194368 and analyzed using GEO2R, only top gene shown. Authors identified transcriptional adaptations of GR signaling in the amygdala of humans with OUD. Thus, GRs, their coregulators and downstream systems may represent viable therapeutic targets to treat the “stress side” of OUD.
Authors:
Stephanie A Carmack, Janaina C M Vendruscolo, M Adrienne McGinn, Jorge Miranda-Barrientos, Vez Repunte-Canonigo, Gabriel D Bosse, Daniele Mercatelli, Federico M Giorgi, Yu Fu, Anthony J Hinrich, Francine M Jodelka, Karen Ling, Robert O Messing, Randall T Peterson, Frank Rigo, Scott Edwards, Pietro P Sanna, Marisela Morales, Michelle L Hastings, George F Koob, Leandro F Vendruscolo
QTL for morphine preference on Chr10 at D10MIT282 (24.33 Mbp , Build 37)
Description:
morphine preference spans 0.00 - 49.33 Mbp (NCBI Build 37) on Chr10. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
Authors:
Berrettini WH, Ferraro TN, Alexander RC, Buchberg AM, Vogel WH
QTL for alcohol preference locus on Chr10 at D10Mit126 (39.43 Mbp , Build 37)
Description:
alcohol preference locus spans 14.43 - 64.43 Mbp (NCBI Build 37) on Chr10. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
QTL for alcohol preference locus on Chr10 at D10Mit126 (39.43 Mbp , Build 37)
Description:
alcohol preference locus spans 14.43 - 64.43 Mbp (NCBI Build 37) on Chr10. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
Genes associated with Homo sapiens that interact with the MeSH term 'Arsenic' (D001151). Incorporates data from 87 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'arsenite' (C015001). Incorporates data from 3 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'panobinostat' (C496932). Incorporates data from 1 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Aflatoxin B1' (D016604). Incorporates data from 5 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Ethyl Methanesulfonate' (D005020). Incorporates data from 1 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
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