List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Type 2 diabetes. The EFO term type II diabetes mellitus was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
K Yasuda, K Miyake, Y Horikawa, K Hara, H Osawa, H Furuta, Y Hirota, H Mori, A Jonsson, Y Sato, K Yamagata, Y Hinokio, HY Wang, T Tanahashi, N Nakamura, Y Oka, N Iwasaki, Y Iwamoto, Y Yamada, Y Seino, H Maegawa, A Kashiwagi, J Takeda, E Maeda, HD Shin, YM Cho, KS Park, HK Lee, MC Ng, RC Ma, WY So, JC Chan, V Lyssenko, T Tuomi, P Nilsson, L Groop, N Kamatani, A Sekine, Y Nakamura, K Yamamoto, T Yoshida, K Tokunaga, M Itakura, H Makino, K Nanjo, T Kadowaki, M Kasuga
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Type 2 diabetes. The EFO term type II diabetes mellitus was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
H Unoki, A Takahashi, T Kawaguchi, K Hara, M Horikoshi, G Andersen, DP Ng, J Holmkvist, K Borch-Johnsen, T Jørgensen, A Sandbaek, T Lauritzen, T Hansen, S Nurbaya, T Tsunoda, M Kubo, T Babazono, H Hirose, M Hayashi, Y Iwamoto, A Kashiwagi, K Kaku, R Kawamori, ES Tai, O Pedersen, N Kamatani, T Kadowaki, R Kikkawa, Y Nakamura, S Maeda
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Type 2 diabetes. The EFO term type II diabetes mellitus was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
FJ Tsai, CF Yang, CC Chen, LM Chuang, CH Lu, CT Chang, TY Wang, RH Chen, CF Shiu, YM Liu, CC Chang, P Chen, CH Chen, CS Fann, YT Chen, JY Wu
A family of delayed rectifier voltage-gated potassium channels that share homology with their founding member, KCNQ1 PROTEIN. KCNQ potassium channels have been implicated in a variety of diseases including LONG QT SYNDROME; DEAFNESS; and EPILEPSY.
Generated by gene2mesh v. 1.1.1
A form of long QT syndrome that is associated with congenital deafness. It is characterized by abnormal cardioelectrophysiology involving the VOLTAGE-GATED POTASSIUM CHANNEL. It results from mutation of KCNQ1 gene (Subtype 1 or JLN1) or the KCNE1 gene (Subtype 2 or JLN2).
Generated by gene2mesh v. 1.1.1
A form of long QT syndrome that is without congenital deafness. It is caused by mutation of the KCNQ1 gene which encodes a protein in the VOLTAGE-GATED POTASSIUM CHANNEL.
Generated by gene2mesh v. 1.1.1
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Type 2 diabetes. The EFO term type II diabetes mellitus was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
BF Voight, LJ Scott, V Steinthorsdottir, AP Morris, C Dina, RP Welch, E Zeggini, C Huth, YS Aulchenko, G Thorleifsson, LJ McCulloch, T Ferreira, H Grallert, N Amin, G Wu, CJ Willer, S Raychaudhuri, SA McCarroll, C Langenberg, OM Hofmann, J Dupuis, L Qi, AV Segrè, M van Hoek, P Navarro, K Ardlie, B Balkau, R Benediktsson, AJ Bennett, R Blagieva, E Boerwinkle, LL Bonnycastle, K Bengtsson Boström, B Bravenboer, S Bumpstead, NP Burtt, G Charpentier, PS Chines, M Cornelis, DJ Couper, G Crawford, AS Doney, KS Elliott, AL Elliott, MR Erdos, CS Fox, CS Franklin, M Ganser, C Gieger, N Grarup, T Green, S Griffin, CJ Groves, C Guiducci, S Hadjadj, N Hassanali, C Herder, B Isomaa, AU Jackson, PR Johnson, T Jørgensen, WH Kao, N Klopp, A Kong, P Kraft, J Kuusisto, T Lauritzen, M Li, A Lieverse, CM Lindgren, V Lyssenko, M Marre, T Meitinger, K Midthjell, MA Morken, N Narisu, P Nilsson, KR Owen, F Payne, JR Perry, AK Petersen, C Platou, C Proença, I Prokopenko, W Rathmann, NW Rayner, NR Robertson, G Rocheleau, M Roden, MJ Sampson, R Saxena, BM Shields, P Shrader, G Sigurdsson, T Sparsø, K Strassburger, HM Stringham, Q Sun, AJ Swift, B Thorand, J Tichet, T Tuomi, RM van Dam, TW van Haeften, T van Herpt, JV van Vliet-Ostaptchouk, GB Walters, MN Weedon, C Wijmenga, J Witteman, RN Bergman, S Cauchi, FS Collins, AL Gloyn, U Gyllensten, T Hansen, WA Hide, GA Hitman, A Hofman, DJ Hunter, K Hveem, M Laakso, KL Mohlke, AD Morris, CN Palmer, PP Pramstaller, I Rudan, E Sijbrands, LD Stein, J Tuomilehto, A Uitterlinden, M Walker, NJ Wareham, RM Watanabe, GR Abecasis, BO Boehm, H Campbell, MJ Daly, AT Hattersley, FB Hu, JB Meigs, JS Pankow, O Pedersen, HE Wichmann, I Barroso, JC Florez, TM Frayling, L Groop, R Sladek, U Thorsteinsdottir, JF Wilson, T Illig, P Froguel, CM van Duijn, K Stefansson, D Altshuler, M Boehnke, MI McCarthy
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Gout. The EFO term gout was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
C Li, Z Li, S Liu, C Wang, L Han, L Cui, J Zhou, H Zou, Z Liu, J Chen, X Cheng, Z Zhou, C Ding, M Wang, T Chen, Y Cui, H He, K Zhang, C Yin, Y Wang, S Xing, B Li, J Ji, Z Jia, L Ma, J Niu, Y Xin, T Liu, N Chu, Q Yu, W Ren, X Wang, A Zhang, Y Sun, H Wang, J Lu, Y Li, Y Qing, G Chen, Y Wang, L Zhou, H Niu, J Liang, Q Dong, X Li, QS Mi, Y Shi
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Type 2 diabetes. The EFO term type II diabetes mellitus was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
H Li, W Gan, L Lu, X Dong, X Han, C Hu, Z Yang, L Sun, W Bao, P Li, M He, L Sun, Y Wang, J Zhu, Q Ning, Y Tang, R Zhang, J Wen, D Wang, X Zhu, K Guo, X Zuo, X Guo, H Yang, X Zhou, X Zhang, L Qi, RJ Loos, FB Hu, T Wu, Y Liu, L Liu, Z Yang, R Hu, W Jia, L Ji, Y Li, X Lin
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Body mass index. The EFO term body mass index was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
W Wen, W Zheng, Y Okada, F Takeuchi, Y Tabara, JY Hwang, R Dorajoo, H Li, FJ Tsai, X Yang, J He, Y Wu, M He, Y Zhang, J Liang, X Guo, WH Sheu, R Delahanty, X Guo, M Kubo, K Yamamoto, T Ohkubo, MJ Go, JJ Liu, W Gan, CC Chen, Y Gao, S Li, NR Lee, C Wu, X Zhou, H Song, J Yao, IT Lee, J Long, T Tsunoda, K Akiyama, N Takashima, YS Cho, RT Ong, L Lu, CH Chen, A Tan, TK Rice, LS Adair, L Gui, M Allison, WJ Lee, Q Cai, M Isomura, S Umemura, YJ Kim, M Seielstad, J Hixson, YB Xiang, M Isono, BJ Kim, X Sim, W Lu, T Nabika, J Lee, WY Lim, YT Gao, R Takayanagi, DH Kang, TY Wong, CA Hsiung, IC Wu, JM Juang, J Shi, BY Choi, T Aung, F Hu, MK Kim, WY Lim, TD Wang, MH Shin, J Lee, BT Ji, YH Lee, TL Young, DH Shin, BY Chun, MC Cho, BG Han, CM Hwu, TL Assimes, D Absher, X Yan, E Kim, JZ Kuo, S Kwon, KD Taylor, YD Chen, JI Rotter, L Qi, D Zhu, T Wu, KL Mohlke, D Gu, Z Mo, JY Wu, X Lin, T Miki, ES Tai, JY Lee, N Kato, XO Shu, T Tanaka
GWAS: disposition index measurement, glucose homeostasis measurement
Description:
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Glucose homeostasis traits. The EFO term disposition index measurement, glucose homeostasis measurement was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
ND Palmer, MO Goodarzi, CD Langefeld, N Wang, X Guo, KD Taylor, TE Fingerlin, JM Norris, TA Buchanan, AH Xiang, T Haritunians, JT Ziegler, AH Williams, D Stefanovski, J Cui, AW Mackay, LF Henkin, RN Bergman, X Gao, J Gauderman, R Varma, CL Hanis, NJ Cox, HM Highland, JE Below, AL Williams, NP Burtt, CA Aguilar-Salinas, A Huerta-Chagoya, C Gonzalez-Villalpando, L Orozco, CA Haiman, MY Tsai, WC Johnson, J Yao, L Rasmussen-Torvik, J Pankow, B Snively, RD Jackson, S Liu, JL Nadler, F Kandeel, YD Chen, DW Bowden, SS Rich, LJ Raffel, JI Rotter, RM Watanabe, LE Wagenknecht
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Type 2 diabetes. The EFO term type II diabetes mellitus was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
MC Ng, D Shriner, BH Chen, J Li, WM Chen, X Guo, J Liu, SJ Bielinski, LR Yanek, MA Nalls, ME Comeau, LJ Rasmussen-Torvik, RA Jensen, DS Evans, YV Sun, P An, SR Patel, Y Lu, J Long, LL Armstrong, L Wagenknecht, L Yang, BM Snively, ND Palmer, P Mudgal, CD Langefeld, KL Keene, BI Freedman, JC Mychaleckyj, U Nayak, LJ Raffel, MO Goodarzi, YD Chen, HA Taylor, A Correa, M Sims, D Couper, JS Pankow, E Boerwinkle, A Adeyemo, A Doumatey, G Chen, RA Mathias, D Vaidya, AB Singleton, AB Zonderman, RP Igo, JR Sedor, EK Kabagambe, DS Siscovick, B McKnight, K Rice, Y Liu, WC Hsueh, W Zhao, LF Bielak, A Kraja, MA Province, EP Bottinger, O Gottesman, Q Cai, W Zheng, WJ Blot, WL Lowe, JA Pacheco, DC Crawford, E Grundberg, SS Rich, MG Hayes, XO Shu, RJ Loos, IB Borecki, PA Peyser, SR Cummings, BM Psaty, M Fornage, SK Iyengar, MK Evans, DM Becker, WH Kao, JG Wilson, JI Rotter, MM Sale, S Liu, CN Rotimi, DW Bowden
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was QT interval. The EFO term QT interval was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
C Newton-Cheh, M Eijgelsheim, KM Rice, PI de Bakker, X Yin, K Estrada, JC Bis, K Marciante, F Rivadeneira, PA Noseworthy, N Sotoodehnia, NL Smith, JI Rotter, JA Kors, JC Witteman, A Hofman, SR Heckbert, CJ O'Donnell, AG Uitterlinden, BM Psaty, T Lumley, MG Larson, BH Stricker
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was QT interval. The EFO term QT interval was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
A Pfeufer, S Sanna, DE Arking, M Müller, V Gateva, C Fuchsberger, GB Ehret, M Orrú, C Pattaro, A Köttgen, S Perz, G Usala, M Barbalic, M Li, B Pütz, A Scuteri, RJ Prineas, MF Sinner, C Gieger, SS Najjar, WH Kao, TW Mühleisen, M Dei, C Happle, S Möhlenkamp, L Crisponi, R Erbel, KH Jöckel, S Naitza, G Steinbeck, F Marroni, AA Hicks, E Lakatta, B Müller-Myhsok, PP Pramstaller, HE Wichmann, D Schlessinger, E Boerwinkle, T Meitinger, M Uda, J Coresh, S Kääb, GR Abecasis, A Chakravarti
chr11p15
Genes in cytogenetic band chr11p15
c1 - Positional genesets for each human chromosome and cytogenetic band.
Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections.
gene2msig v. 0.1.0
Last updated 2015.08.31
Neocortex Gene Expression Correlates for HARGREAVES_MEANBOTH measured in BXD RI Females obtained using GeneNetwork Neocortex ILM6v1.1 (Feb08) RankInv. The HARGREAVES_MEANBOTH measures Thermal Nociception Hargreaves' Test under the domain Pain. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Neocortex Gene Expression Correlates for HARGREAVES_MEANBOTH measured in BXD RI Females & Males obtained using GeneNetwork Neocortex ILM6v1.1 (Feb08) RankInv. The HARGREAVES_MEANBOTH measures Thermal Nociception Hargreaves' Test under the domain Pain. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Neocortex Gene Expression Correlates for LD_PCT_LIGHT_TIME measured in BXD RI Males obtained using GeneNetwork Neocortex ILM6v1.1 (Feb08) RankInv. The LD_PCT_LIGHT_TIME measures Light-Dark Box Percentage time in light under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Neocortex Gene Expression Correlates for OF_DIST_15_20 measured in BXD RI Males obtained using GeneNetwork Neocortex ILM6v1.1 (Feb08) RankInv. The OF_DIST_15_20 measures Open Field - Total distance traveled 15-20 minutes under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
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