List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Behcet's disease. The EFO term Behcet's syndrome was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
EF Remmers, F Cosan, Y Kirino, MJ Ombrello, N Abaci, C Satorius, JM Le, B Yang, BD Korman, A Cakiris, O Aglar, Z Emrence, H Azakli, D Ustek, I Tugal-Tutkun, G Akman-Demir, W Chen, CI Amos, MB Dizon, AA Kose, G Azizlerli, B Erer, OJ Brand, VG Kaklamani, P Kaklamanis, E Ben-Chetrit, M Stanford, F Fortune, M Ghabra, WE Ollier, YH Cho, D Bang, J O'Shea, GR Wallace, M Gadina, DL Kastner, A Gül
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Ulcerative colitis. The EFO term ulcerative colitis was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
A Franke, T Balschun, TH Karlsen, J Sventoraityte, S Nikolaus, G Mayr, FS Domingues, M Albrecht, M Nothnagel, D Ellinghaus, C Sina, CM Onnie, RK Weersma, PC Stokkers, C Wijmenga, M Gazouli, D Strachan, WL McArdle, S Vermeire, P Rutgeerts, P Rosenstiel, M Krawczak, MH Vatn, CG Mathew, S Schreiber
GWAS conducted in 1,215 Turkish BD patients with 1278 controls
Authors:
EF Remmers, F Cosan, Y Kirino, MJ Ombrello, N Abaci, C Satorius, JM Le, B Yang, BD Korman, A Cakiris, O Aglar, Z Emrence, H Azakli, D Ustek, I Tugal-Tutkun, G Akman-Demir, W Chen, CI Amos, MB Dizon, AA Kose, G Azizlerli, B Erer, OJ Brand, VG Kaklamani, P Kaklamanis, E Ben-Chetrit, M Stanford, F Fortune, M Ghabra, WE Ollier, YH Cho, D Bang, J O'Shea, GR Wallace, M Gadina, DL Kastner, A Gül
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Behcet's disease. The EFO term Behcet's syndrome was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
N Mizuki, A Meguro, M Ota, S Ohno, T Shiota, T Kawagoe, N Ito, J Kera, E Okada, K Yatsu, YW Song, EB Lee, N Kitaichi, K Namba, Y Horie, M Takeno, S Sugita, M Mochizuki, S Bahram, Y Ishigatsubo, H Inoko
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Crohn's disease. The EFO term Crohn's disease was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
A Franke, DP McGovern, JC Barrett, K Wang, GL Radford-Smith, T Ahmad, CW Lees, T Balschun, J Lee, R Roberts, CA Anderson, JC Bis, S Bumpstead, D Ellinghaus, EM Festen, M Georges, T Green, T Haritunians, L Jostins, A Latiano, CG Mathew, GW Montgomery, NJ Prescott, S Raychaudhuri, JI Rotter, P Schumm, Y Sharma, LA Simms, KD Taylor, D Whiteman, C Wijmenga, RN Baldassano, M Barclay, TM Bayless, S Brand, C Büning, A Cohen, JF Colombel, M Cottone, L Stronati, T Denson, M De Vos, R D'Inca, M Dubinsky, C Edwards, T Florin, D Franchimont, R Gearry, J Glas, A Van Gossum, SL Guthery, J Halfvarson, HW Verspaget, JP Hugot, A Karban, D Laukens, I Lawrance, M Lemann, A Levine, C Libioulle, E Louis, C Mowat, W Newman, J Panés, A Phillips, DD Proctor, M Regueiro, R Russell, P Rutgeerts, J Sanderson, M Sans, F Seibold, AH Steinhart, PC Stokkers, L Torkvist, G Kullak-Ublick, D Wilson, T Walters, SR Targan, SR Brant, JD Rioux, M D'Amato, RK Weersma, S Kugathasan, AM Griffiths, JC Mansfield, S Vermeire, RH Duerr, MS Silverberg, J Satsangi, S Schreiber, JH Cho, V Annese, H Hakonarson, MJ Daly, M Parkes
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Type 1 diabetes. The EFO term type I diabetes mellitus was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
JC Barrett, DG Clayton, P Concannon, B Akolkar, JD Cooper, HA Erlich, C Julier, G Morahan, J Nerup, C Nierras, V Plagnol, F Pociot, H Schuilenburg, DJ Smyth, H Stevens, JA Todd, NM Walker, SS Rich
QTL associated with cytokine deficiency colitis susceptibility 10. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (93561953)
Authors:
de Buhr MF, Mhler M, Geffers R, Hansen W, Westendorf AM, Lauber J, Buer J, Schlegelberger B, Hedrich HJ, Bleich A
QTL associated with cytokine deficiency colitis susceptibility 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (117938185)
Authors:
de Buhr MF, Mhler M, Geffers R, Hansen W, Westendorf AM, Lauber J, Buer J, Schlegelberger B, Hedrich HJ, Bleich A
QTL associated with cytokine deficiency colitis susceptibility 9. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (142094205)
Authors:
de Buhr MF, Mhler M, Geffers R, Hansen W, Westendorf AM, Lauber J, Buer J, Schlegelberger B, Hedrich HJ, Bleich A
QTL associated with cytokine deficiency colitis susceptibility 7. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (82743296)
Authors:
Mhler M, Most C, Schmidtke S, Sundberg JP, Li R, Hedrich HJ, Churchill GA
QTL associated with cytokine deficiency colitis susceptibility 8. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (82743296)
Authors:
Mhler M, Most C, Schmidtke S, Sundberg JP, Li R, Hedrich HJ, Churchill GA
Whole Brain Gene Expression Correlates for ST_PCT_PPI_80 measured in BXD RI Females & Males obtained using INIA Brain mRNA M430 (Jun06) RMA. The ST_PCT_PPI_80 measures Prepulse inhibition at 80db under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Whole Brain Gene Expression Correlates for ST_PCT_PPI_85 measured in BXD RI Males obtained using INIA Brain mRNA M430 (Jun06) RMA. The ST_PCT_PPI_85 measures Prepulse inhibition at 85db under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Whole Brain Gene Expression Correlates for ST_PCT_STARTLE_80 measured in BXD RI Females & Males obtained using INIA Brain mRNA M430 (Jun06) RMA. The ST_PCT_STARTLE_80 measures Acoustic Startle Response Percentage of maximum startle response at 80 db under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Whole Brain Gene Expression Correlates for ST_PCT_STARTLE_85 measured in BXD RI Males obtained using INIA Brain mRNA M430 (Jun06) RMA. The ST_PCT_STARTLE_85 measures Acoustic Startle Response Percentage of maximum response at 85 db under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Top tier were previously reported at genome-wide significance (5×10−8), bottom tier were previously reported with weaker evidence. P values are one-tailed in the direction of the previously reported association.
Authors:
Barrett JC, Lee JC, Lees CW, Prescott NJ, Anderson CA, Phillips A, Wesley E, Parnell K, Zhang H, Drummond H, Nimmo ER, Massey D, Blaszczyk K, Elliott T, Cotterill L, Dallal H, Lobo AJ, Mowat C, Sanderson JD, Jewell DP, Newman WG, Edwards C, Ahmad T, Mansfield JC, Satsangi J, Parkes M, Mathew CG, Donnelly P, Peltonen L, Blackwell JM, Bramon E, Brown MA, Casas JP, Corvin A, Craddock N, Deloukas P, Duncanson A, Jankowski J, Markus HS, Mathew CG, McCarthy MI, Palmer CN, Plomin R, Rautanen A, Sawcer SJ, Samani N, Trembath RC, Viswanathan AC, Wood N, Spencer CC, Barrett JC, Bellenguez C, Davison D, Freeman C, Strange A, Donnelly P, Langford C, Hunt SE, Edkins S, Gwilliam R, Blackburn H, Bumpstead SJ, Dronov S, Gillman M, Gray E, Hammond N, Jayakumar A, McCann OT, Liddle J, Perez ML, Potter SC, Ravindrarajah R, Ricketts M, Waller M, Weston P, Widaa S, Whittaker P, Deloukas P, Peltonen L, Mathew CG, Blackwell JM, Brown MA, Corvin A, McCarthy MI, Spencer CC, Attwood AP, Stephens J, Sambrook J, Ouwehand WH, McArdle WL, Ring SM, Strachan DP
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