List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Blood pressure. The EFO term systolic blood pressure was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
N Franceschini, E Fox, Z Zhang, TL Edwards, MA Nalls, YJ Sung, BO Tayo, YV Sun, O Gottesman, A Adeyemo, AD Johnson, JH Young, K Rice, Q Duan, F Chen, Y Li, H Tang, M Fornage, KL Keene, JS Andrews, JA Smith, JD Faul, Z Guangfa, W Guo, Y Liu, SS Murray, SK Musani, S Srinivasan, DR Velez Edwards, H Wang, LC Becker, P Bovet, M Bochud, U Broeckel, M Burnier, C Carty, DI Chasman, G Ehret, WM Chen, G Chen, W Chen, J Ding, AW Dreisbach, MK Evans, X Guo, ME Garcia, R Jensen, MF Keller, G Lettre, V Lotay, LW Martin, JH Moore, AC Morrison, TH Mosley, A Ogunniyi, W Palmas, G Papanicolaou, A Penman, JF Polak, PM Ridker, B Salako, AB Singleton, D Shriner, KD Taylor, R Vasan, K Wiggins, SM Williams, LR Yanek, W Zhao, AB Zonderman, DM Becker, G Berenson, E Boerwinkle, E Bottinger, M Cushman, C Eaton, F Nyberg, G Heiss, JN Hirschhron, VJ Howard, KJ Karczewsk, MB Lanktree, K Liu, Y Liu, R Loos, K Margolis, M Snyder, BM Psaty, NJ Schork, DR Weir, CN Rotimi, MM Sale, T Harris, SL Kardia, SC Hunt, D Arnett, S Redline, RS Cooper, NJ Risch, DC Rao, JI Rotter, A Chakravarti, AP Reiner, D Levy, BJ Keating, X Zhu
List of positional candidate genes after correcting for multiple testing and controlling the false discovery rate from genome wide association studies (GWAS) retrieved from the NHGRI-EBI Catalog of published genome-wide association studies (http://www.ebi.ac.uk/gwas/). The disease/trait examined in this study, as reported by the authors, was Blood pressure. The EFO term diastolic blood pressure was annotated to this set after curation by NHGRI-EBI. Intergenic SNPS were mapped to both the upstream and downstream gene. P-value uploaded. This gene set was generated using gwas2gs v. 0.1.8 and the GWAS Catalog v. 1.0.1.
Authors:
N Franceschini, E Fox, Z Zhang, TL Edwards, MA Nalls, YJ Sung, BO Tayo, YV Sun, O Gottesman, A Adeyemo, AD Johnson, JH Young, K Rice, Q Duan, F Chen, Y Li, H Tang, M Fornage, KL Keene, JS Andrews, JA Smith, JD Faul, Z Guangfa, W Guo, Y Liu, SS Murray, SK Musani, S Srinivasan, DR Velez Edwards, H Wang, LC Becker, P Bovet, M Bochud, U Broeckel, M Burnier, C Carty, DI Chasman, G Ehret, WM Chen, G Chen, W Chen, J Ding, AW Dreisbach, MK Evans, X Guo, ME Garcia, R Jensen, MF Keller, G Lettre, V Lotay, LW Martin, JH Moore, AC Morrison, TH Mosley, A Ogunniyi, W Palmas, G Papanicolaou, A Penman, JF Polak, PM Ridker, B Salako, AB Singleton, D Shriner, KD Taylor, R Vasan, K Wiggins, SM Williams, LR Yanek, W Zhao, AB Zonderman, DM Becker, G Berenson, E Boerwinkle, E Bottinger, M Cushman, C Eaton, F Nyberg, G Heiss, JN Hirschhron, VJ Howard, KJ Karczewsk, MB Lanktree, K Liu, Y Liu, R Loos, K Margolis, M Snyder, BM Psaty, NJ Schork, DR Weir, CN Rotimi, MM Sale, T Harris, SL Kardia, SC Hunt, D Arnett, S Redline, RS Cooper, NJ Risch, DC Rao, JI Rotter, A Chakravarti, AP Reiner, D Levy, BJ Keating, X Zhu
cocaine related behavior 7 (Cocrb7) spans 28.968906 - 78.968906 Mbp (NCBI Build 37) on Chr 6. Obtained from MGI (http://www.informatics.jax.org) by searching for QTLs containing the keyword .
QTL for cocaine related behavior on Chr6 at D6Mit183 (53.97 Mbp , Build 37)
Description:
cocaine related behavior spans 28.97 - 78.97 Mbp (NCBI Build 37) on Chr6. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
QTL for METH responses for body temperature on Chr6 at D6Ncvs34 (54.50 Mbp , Build 37)
Description:
METH responses for body temperature spans 29.50 - 79.50 Mbp (NCBI Build 37) on Chr6. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
QTL for ethanol induced locomotion on Chr6 at NA (64.65 Mbp , Build 37)
Description:
ethanol induced locomotion spans 39.65 - 89.65 Mbp (NCBI Build 37) on Chr6. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
Authors:
Hitzemann R, Demarest K, Koyner J, Cipp L, Patel N, Rasmussen E, McCaughran J Jr
QTL for METH responses for home cage activity on Chr6 at D6Nds3 (67.84 Mbp , Build 37)
Description:
METH responses for home cage activity spans 42.84 - 92.84 Mbp (NCBI Build 37) on Chr6. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
QTL for METH responses for body temperature on Chr6 at D6MIt16 (67.84 Mbp , Build 37)
Description:
METH responses for body temperature spans 42.84 - 92.84 Mbp (NCBI Build 37) on Chr6. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
Genome-wide association study identifies a locus at 7p15.2 associated with endometriosis.
Authors:
Painter JN, Anderson CA, Nyholt DR, Macgregor S, Lin J, Lee SH, Lambert A, Zhao ZZ, Roseman F, Guo Q, Gordon SD, Wallace L, Henders AK, Visscher PM, Kraft P, Martin NG, Morris AP, Treloar SA, Kennedy SH, Missmer SA, Montgomery GW, Zondervan KT
Genes associated with Homo sapiens that interact with the MeSH term 'Arsenic' (D001151). Incorporates data from 87 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Tretinoin' (D014212). Incorporates data from 1 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Aflatoxin B1' (D016604). Incorporates data from 5 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Plant Extracts' (D010936). Incorporates data from 489 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'Gold' (D006046). Incorporates data from 5 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
Genes associated with Homo sapiens that interact with the MeSH term 'tamibarotene' (C061133). Incorporates data from 11 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene.
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