Tier
Species
Size
Attr.
GeneSet
Tier IV
8709
GS391: RIKEN Cerebellum C57BL/6J Development Series
Figure Label:
Riken CBL Development
Description:
Genes that vary in expression in the cerebellum across early development of C57BL/6J
Authors:
Kagami Y, Furuichi T
Tier III
2388
GS866: Linear decrease in expression in both Pax6 (Sey) mutants and controls.
Figure Label:
Sey_Pax6_Age_Reduced_Lin
Description:
Linear decrease in cerebellar gene expression across three developmental time points in both Pax6 Sey (Small-eyes) mutants and controls.
Authors:
None
Tier IV
3151
GS3647: Meta-analysis of brain gene expression associated with voluntary consumption of ethanol in mice
Figure Label:
Et pref meta-analysis
Description:
Metaanalysis of 6 isogenic and three selected lines with elevated voluntary consumption of ethanol. List of 5182 probesets at p<0.05
Authors:
Mulligan MK, Ponomarev I, Hitzemann RJ, Belknap JK, Tabakoff B, Harris RA, Crabbe JC, Blednov YA, Grahame NJ, Phillips TJ, Finn DA, Hoffman PL, Iyer VR, Koob GF, Bergeson SE
Tier III
380
GS31782: Gene Expression Correlations with Hippocampus Consortium M430v2 (Jun06) RMA for Localization of genes affecting alcohol drinking in mice Phillips et al (1994).
Figure Label:
EtOH preference co-expression
Description:
Preference for 10% ethanol (g/kg) in tap water offered vs. tap water; means are the average of days 2 and 4 of a 4-day 24-hr access period by Phillips TJ , et al
Authors:
Phillips TJ, Crabbe JC, Metten P, Belknap JK
Tier II
83
GS36189: Striatum Gene expression correlates of Locomotor activity after second saline treatment. in Males BXD
Figure Label:
STR MDMA_ACT_SAL_2 M BXD M430v2 RMA
Description:
Striatum Gene Expression Correlates for MDMA_ACT_SAL_2 measured in BXD RI Males obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The MDMA_ACT_SAL_2 measures Locomotor activity after second saline treatment. under the domain MDMA. The correlates were thresholded at a p-value of less than 0.001.
Authors:
Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ
Tier II
530
GS84267: nicotine sensitivity (Published QTL, Chr 13)
Figure Label:
QTL for nicotine sensitivity on Chr13 at D13Mit218 (22.75 Mbp , Build 37)
Description:
nicotine sensitivity spans 0.00 - 47.75 Mbp (NCBI Build 37) on Chr13. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org).
Authors:
Gill KJ, Boyle AE
Tier III
8148
GS128199: Alcohol Preference union of 86 Gene Sets
Figure Label:
Alcohol Preference Union
Description:
The union of alcohol preference experimental studies (Tier 3) from 86 gene sets.
Authors:
None
Tier II
211
GS129100: bone mineral density 3 (Bmd3 Published QTL Chr 13)
Figure Label:
QTL-Bmd3-Mouse-Chr 13
Description:
QTL associated with bone mineral density 3. The confidence interval is Chr13:0-24491963 bp,+strand
Authors:
Shultz KL, Donahue LR, Bouxsein ML, Baylink DJ, Rosen CJ, Beamer WG
Tier II
351
GS135384: body weight 1 (Bdw1, Published QTL Chr 13)
Figure Label:
QTL-Bdw1-Mouse-Chr 13
Description:
QTL associated with body weight 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (19721387)
Authors:
Kim EH, Lee CH, Hyun BH, Suh JG, Oh YS, Namikawa T, Ishikawa A
Tier II
340
GS135550: CD4 T cell subset 6 (Cd4ts6, Published QTL Chr 13)
Figure Label:
QTL-Cd4ts6-Mouse-Chr 13
Description:
QTL associated with CD4 T cell subset 6. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (17085794)
Authors:
Jackson AU, Galecki AT, Burke DT, Miller RA
Tier II
355
GS135976: wound healing/regeneration 3 (Heal3, Published QTL Chr 13)
Figure Label:
QTL-Heal3-Mouse-Chr 13
Description:
QTL associated with wound healing/regeneration 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (20587899)
Authors:
Heber-Katz E, Leferovich JM, Bedelbaeva K, Gourevitch D
Tier II
359
GS136005: hapatic PMN infiltration 1 (Hpi1, Published QTL Chr 13)
Figure Label:
QTL-Hpi1-Mouse-Chr 13
Description:
QTL associated with hapatic PMN infiltration 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (21385135)
Authors:
Matesic LE, Niemitz EL, De Maio A, Reeves RH
Tier II
355
GS136221: mandible length 13 (Manln13, Published QTL Chr 13)
Figure Label:
QTL-Manln13-Mouse-Chr 13
Description:
QTL associated with mandible length 13. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (20587899)
Authors:
Cheverud JM, Ehrich TH, Vaughn TT, Koreishi SF, Linsey RB, Pletscher LS
Tier II
351
GS136341: nicotine induced locomotor activity 7 (Nilac7, Published QTL Chr 13)
Figure Label:
QTL-Nilac7-Mouse-Chr 13
Description:
QTL associated with nicotine induced locomotor activity 7. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (19721387)
Authors:
Gill KJ, Boyle AE
Tier II
415
GS136440: peak bone density 2 (Pbd2, Published QTL Chr 13)
Figure Label:
QTL-Pbd2-Mouse-Chr 13
Description:
QTL associated with peak bone density 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (29327491)
Authors:
Nakanishi R, Shimizu M, Mori M, Akiyama H, Okudaira S, Otsuki B, Hashimoto M, Higuchi K, Hosokawa M, Tsuboyama T, Nakamura T
Tier II
355
GS136884: testis weight QTL 1 (Twq1, Published QTL Chr 13)
Figure Label:
QTL-Twq1-Mouse-Chr 13
Description:
QTL associated with testis weight QTL 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (20523211)
Authors:
Zdek V, Musilov A, Pintr J, Simkov M, Pravenec M
Tier I
3
GS177360: GO:0047086 ketosteroid monooxygenase activity
Figure Label:
GO:0047086
Description:
"Catalysis of the reaction: O2 + NADPH + progesterone = H2O + NADP+ + testosterone acetate." [EC:1.14.13.54, MetaCyc:1.14.13.54-RXN]
Authors:
None
Tier I
4
GS178412: GO:0047023 androsterone dehydrogenase activity
Figure Label:
GO:0047023
Description:
"Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione." [EC:1.1.1.209, MetaCyc:1.1.1.209-RXN]
Authors:
None
Tier I
24
GS178645: GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
Figure Label:
GO:0016628
Description:
"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces NAD or NADP." [GOC:jl]
Authors:
None
Tier I
7
GS179841: GO:0044598 doxorubicin metabolic process
Figure Label:
GO:0044598
Description:
"The chemical reactions and pathways involving doxorubicin, an anthracycline antibiotic, used in cancer chemotherapy." [CHEBI:28748]
Authors:
None
Tier I
3
GS182546: GO:0047115 trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity
Figure Label:
GO:0047115
Description:
"Catalysis of the reaction: NADP+ + trans-1,2-dihydrobenzene-1,2-diol = NADPH + catechol." [EC:1.3.1.20, MetaCyc:1.3.1.20-RXN]
Authors:
None
Tier I
3
GS183675: GO:0009753 response to jasmonic acid stimulus
Figure Label:
GO:0009753
Description:
"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus." [GOC:jl]
Authors:
None
Tier I
7651
GS185131: GO:0044699 single-organism process
Figure Label:
GO:0044699
Description:
"A biological process that involves only one organism." [GOC:jl]
Authors:
None
Tier I
8373
GS185585: GO:0044710 single-organism metabolic process
Figure Label:
GO:0044710
Description:
"A metabolic process - chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances - which involves a single organism." [GOC:jl]
Authors:
None
Tier I
3
GS185686: GO:0071395 cellular response to jasmonic acid stimulus
Figure Label:
GO:0071395
Description:
"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus." [GOC:mah]
Authors:
None
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