Gene Details

HIST1H2BG and homologs in 5 species are found in 252 GeneSets:

- Entrez   - Ensembl   - GeneNetwork   - STRING   - Comparative Toxicogenomics Database  

Select gene sets below using the check boxes, and then add them to a project using the pull down below. You can also create a project using the pull down. To view a set, click on the GeneSetID:GeneSet Description shown in green below.

Select All Add Selected to Project... - Create New Project...
	GS136891: voluntary alcohol consumption QTL 5 (Vacq5, Published QTL Chr 13) Figure Label: QTL-Vacq5-Mouse-Chr 13 Species: Mus musculus  Data Points: 524  Description: QTL associated with voluntary alcohol consumption QTL 5. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (37033374) Available to: Everyone (Tier I)
	GS180154: GO:0065004 protein-DNA complex assembly Figure Label: GO:0065004 Species: Mus musculus  Data Points: 78  Description: "The aggregation, arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex." [GOC:jl] Available to: Everyone (Tier I)
	GS34472: Whole Brain Gene expression correlates of Novel environment locomotion (activity beam breaks) 15-30 min in the periphery in BXD Females Figure Label: WB NEPCOUNT30 F BXD M430 RMA Species: Mus musculus  Data Points: 53  Description: Whole Brain Gene Expression Correlates for NEPCOUNT30 measured in BXD RI Females obtained using INIA Brain mRNA M430 (Jun06) RMA. The NEPCOUNT30 measures Novel environment locomotion (activity beam breaks) 15-30 min in the periphery under the domain Morphine. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier III)
	GS35251: Striatum Gene expression correlates of Maximum startle response to 70 db in Females BXD Figure Label: STR ST_MAX_70 F BXD M430v2 RMA Species: Mus musculus  Data Points: 205  Description: Striatum Gene Expression Correlates for ST_MAX_70 measured in BXD RI Females obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The ST_MAX_70 measures Maximum startle response to 70 db under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS123265: Estradiol interacting genes (MeSH:D004958) in CTD Figure Label: D004958 [CTD] Species: Homo sapiens  Data Points: 2424  Description: Genes that interact with the MeSH term 'Estradiol' (D004958). Incorporates data from 764 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS36049: Neocortex Gene expression correlates of Light- Dark Box Total seconds spent in light compartment in Females & Males BXD Figure Label: NCX LD_LIGHT_TIME F&M BXD ILM6v1.1 RankInv Species: Mus musculus  Data Points: 378  Description: Neocortex Gene Expression Correlates for LD_LIGHT_TIME measured in BXD RI Females & Males obtained using GeneNetwork Neocortex ILM6v1.1 (Feb08) RankInv. The LD_LIGHT_TIME measures Light- Dark Box Total seconds spent in light compartment under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS135384: body weight 1 (Bdw1, Published QTL Chr 13) Figure Label: QTL-Bdw1-Mouse-Chr 13 Species: Mus musculus  Data Points: 370  Description: QTL associated with body weight 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (19721387) Available to: Everyone (Tier I)
	GS36541: Neocortex Gene expression correlates of Dowel Test - Time B Sec in Females & Males BXD Figure Label: NCX SPD_TIMEDOWELBSEC F&M BXD ILM6v1.1 RankInv Species: Mus musculus  Data Points: 29  Description: Neocortex Gene Expression Correlates for SPD_TIMEDOWELBSEC measured in BXD RI Females & Males obtained using GeneNetwork Neocortex ILM6v1.1 (Feb08) RankInv. The SPD_TIMEDOWELBSEC measures Dowel Test - Time B Sec under the domain Porsolt. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS34572: Whole Brain Gene expression correlates of Novel environment distance (cm) travelled minutes 0-15 in Females BXD Figure Label: WB NEPDIST15 F BXD M430 RMA Species: Mus musculus  Data Points: 46  Description: Whole Brain Gene Expression Correlates for NEPDIST15 measured in BXD RI Females obtained using INIA Brain mRNA M430 (Jun06) RMA. The NEPDIST15 measures Novel environment distance (cm) travelled minutes 0-15 under the domain Morphine. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS123332: 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide interacting genes (MeSH:D015123) in CTD Figure Label: D015123 [CTD] Species: Homo sapiens  Data Points: 2780  Description: Genes that interact with the MeSH term '7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide' (D015123). Incorporates data from 17 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS125757: Isoflavones interacting genes (MeSH:D007529) in CTD Figure Label: D007529 [CTD] Species: Homo sapiens  Data Points: 145  Description: Genes that interact with the MeSH term 'Isoflavones' (D007529). Incorporates data from 14 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS136041: insulin dependent diabetes susceptibility 14 (Idd14, Published QTL Chr 13) Figure Label: QTL-Idd14-Mouse-Chr 13 Species: Mus musculus  Data Points: 542  Description: QTL associated with insulin dependent diabetes susceptibility 14. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (41008627) Available to: Everyone (Tier I)
	GS191019: GO:0034641 cellular nitrogen compound metabolic process Figure Label: GO:0034641 Species: Mus musculus  Data Points: 4619  Description: "The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells." [GOC:mah] Available to: Everyone (Tier I)
	GS186436: GO:0071824 protein-DNA complex subunit organization Figure Label: GO:0071824 Species: Mus musculus  Data Points: 90  Description: "Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein-DNA complex." [GOC:mah] Available to: Everyone (Tier I)
	GS178814: GO:0046982 protein heterodimerization activity Figure Label: GO:0046982 Species: Mus musculus  Data Points: 387  Description: "Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer." [GOC:ai] Available to: Everyone (Tier I)
	GS179950: GO:0006259 DNA metabolic process Figure Label: GO:0006259 Species: Mus musculus  Data Points: 727  Description: "Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides." [ISBN:0198506732] Available to: Everyone (Tier I)
	GS126646: Carbon Tetrachloride interacting genes (MeSH:D002251) in CTD Figure Label: D002251 [CTD] Species: Homo sapiens  Data Points: 2013  Description: Genes that interact with the MeSH term 'Carbon Tetrachloride' (D002251). Incorporates data from 384 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS192017: GO:0006139 nucleobase-containing compound metabolic process Figure Label: GO:0006139 Species: Mus musculus  Data Points: 4353  Description: "Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids." [GOC:ai] Available to: Everyone (Tier I)
	GS34871: Cerebellum Gene expression correlates of Open Field - Percentage center time in Females BXD Figure Label: CBL OF_CENTER_TIME_PCT F BXD M430 RMA Species: Mus musculus  Data Points: 72  Description: Cerebellum Gene Expression Correlates for OF_CENTER_TIME_PCT measured in BXD RI Females obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The OF_CENTER_TIME_PCT measures Open Field - Percentage center time under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS201251: GO:0044424 intracellular part Figure Label: GO:0044424 Species: Homo sapiens  Data Points: 12234  Description: "Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm." [GOC:jl] Available to: Everyone (Tier I)
	GS178359: GO:0071840 cellular component organization or biogenesis Figure Label: GO:0071840 Species: Mus musculus  Data Points: 3615  Description: "A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellular component." [GOC:mah] Available to: Everyone (Tier I)
	GS122195: Gentamicins interacting genes (MeSH:D005839) in CTD Figure Label: D005839 [CTD] Species: Homo sapiens  Data Points: 132  Description: Genes that interact with the MeSH term 'Gentamicins' (D005839). Incorporates data from 61 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS196932: GO:0065004 protein-DNA complex assembly Figure Label: GO:0065004 Species: Homo sapiens  Data Points: 137  Description: "The aggregation, arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex." [GOC:jl] Available to: Everyone (Tier I)
	GS178357: GO:0071842 cellular component organization at cellular level Figure Label: GO:0071842 Species: Mus musculus  Data Points: 2762  Description: "A process that is carried out at the cellular level and results in the assembly, arrangement of constituent parts, or disassembly of a cellular component." [GOC:mah] Available to: Everyone (Tier I)
	GS86561: Table S2: Additional data file 2 - Lists of probe sets of genes with expression altered by acute and chronic morphine (ANOVA; FDR < 1%). ALL [DRG] provisional Figure Label: Chronic morphine - Morphine vs. Saline Species: Mus musculus  Data Points: 205  Description: Chronic morphine - Morphine vs. Saline DNA microarray Change in gene expression Mice received morphine thrice daily, 09:00 hours, 13:00 hours, and 17:00 hours, for 4 days using a dosing schedule of 10, 20, 40, and 40 mg / kg morphine on days 1, 2, 3, and 4, respectively. On the last day, a final morphine dose of 40 mg / kg was administered at 09:00 hours. The control group received injections of saline in the same time schedule. 4 hours after the last injection the animals were killed. ANOVA The results were obtained using fold change (>1.2) of gene expression level compared with the saline control group. (false discovery rate [FDR] < 1%) (NIF Table ID 134.5 [84.6]) Available to: Everyone (Tier I)
	GS87096: Table S2: List of Cocaine-Treated HDAC5 KO vs. Cocaine-Treated WT Significantly Regulated Genes. [DRG] provisional Figure Label: Chronic cocaine - Histone deacetylase 5 knockout vs. Wildtype Species: Mus musculus  Data Points: 449  Description: Chronic cocaine - Histone deacetylase 5 knockout vs. Wildtype DNA microarray decreased expression 20 mg / kg / day for 7 days Pair-wise comparisons were made between all 4 conditions (WT Saline, WT Cocaine, KO Saline, KO Cocaine), which generated 4 lists of genes 1.2-fold differentially expressed with a P < 0.05. Genes that were significantly regulated by these criteria in the first duplicate study and validated directly via qPCR were included in the final lists. (NIF Table ID 33 [39.5]) Available to: Everyone (Tier I)
	GS193888: GO:0051276 chromosome organization Figure Label: GO:0051276 Species: Homo sapiens  Data Points: 688  Description: "A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information." [GOC:ai, GOC:dph, GOC:jl, GOC:mah] Available to: Everyone (Tier I)
	GS86785: Table S3: Presented are significant functional categories (GO terms) enriched with genes regulated in response to acute and / or chronic morphine, along with lists of probe sets and gene names classified to each GO category. [DRG] provisional Figure Label: Chronic morphine - Morphine vs. Saline Species: Mus musculus  Data Points: 55  Description: Chronic morphine - Morphine vs. Saline DNA microarray Change in mRNA abundance Mice received morphine thrice daily, 09:00 hours, 13:00 hours, and 17:00 hours, for 4 days using a dosing schedule of 10, 20, 40, and 40 mg / kg morphine on days 1, 2, 3, and 4, respectively. On the last day, a final morphine dose of 40 mg / kg was administered at 09:00 hours. The control group received injections of saline in the same time schedule. 4 hours after the last injection the animals were killed. ANOVA; Gene Ontology (GO) classification; Fisher's exact test. Transcripts with a fold change greater than 1.2 (false discovery rate [FDR] < 1%). Functional annotation was done for each strain and results are available in the exported results under Comments. (NIF Table ID 342 [197]) Available to: Everyone (Tier I)
	GS136779: systolic blood pressure 2 (Sysbp2, Published QTL Chr 13) Figure Label: QTL-Sysbp2-Mouse-Chr 13 Species: Mus musculus  Data Points: 507  Description: QTL associated with systolic blood pressure 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (35064678) Available to: Everyone (Tier I)
	GS127931: Olfactory bulb - Allen Mouse Brain Atlas Figure Label: ABA - Olfactory bulb Species: Mus musculus  Data Points: 3319  Description: Genes with particular expression in Olfactory bulb. Available to: Everyone (Tier I)
	GS198868: GO:0000786 nucleosome Figure Label: GO:0000786 Species: Homo sapiens  Data Points: 67  Description: "A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures." [GOC:elh] Available to: Everyone (Tier I)
	GS206500: GO:0031497 chromatin assembly Figure Label: GO:0031497 Species: Homo sapiens  Data Points: 118  Description: "The assembly of DNA, histone proteins, other associated proteins, and sometimes RNA, into chromatin structure, beginning with the formation of the basic unit, the nucleosome, followed by organization of the nucleosomes into higher order structures, ultimately giving rise to a complex organization of specific domains within the nucleus." [http://www.infobiogen.fr/services/chromcancer/IntroItems/ChromatinEducEng.html, PMID:20404130] Available to: Everyone (Tier I)
	GS186744: GO:0043226 organelle Figure Label: GO:0043226 Species: Mus musculus  Data Points: 9740  Description: "Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS34620: Whole Brain Gene expression correlates of Novel environment distance (cm) travelled min 15-30 in BXD Females Figure Label: WB NEPDIST30 F BXD M430 RMA Species: Mus musculus  Data Points: 63  Description: Whole Brain Gene Expression Correlates for NEPDIST30 measured in BXD RI Females obtained using INIA Brain mRNA M430 (Jun06) RMA. The NEPDIST30 measures Novel environment distance (cm) travelled min 15-30 under the domain Morphine. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier III)
	GS182835: GO:0005622 intracellular Figure Label: GO:0005622 Species: Mus musculus  Data Points: 11364  Description: "The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm." [ISBN:0198506732] Available to: Everyone (Tier I)
	GS135996: hippocampal weight 3 (Hipp3, Published QTL Chr 13) Figure Label: QTL-Hipp3-Mouse-Chr 13 Species: Mus musculus  Data Points: 519  Description: QTL associated with hippocampal weight 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (47811017) Available to: Everyone (Tier I)
	GS136221: mandible length 13 (Manln13, Published QTL Chr 13) Figure Label: QTL-Manln13-Mouse-Chr 13 Species: Mus musculus  Data Points: 374  Description: QTL associated with mandible length 13. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (20587899) Available to: Everyone (Tier I)
	GS136005: hapatic PMN infiltration 1 (Hpi1, Published QTL Chr 13) Figure Label: QTL-Hpi1-Mouse-Chr 13 Species: Mus musculus  Data Points: 378  Description: QTL associated with hapatic PMN infiltration 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (21385135) Available to: Everyone (Tier I)
	GS186790: GO:0006725 cellular aromatic compound metabolic process Figure Label: GO:0006725 Species: Mus musculus  Data Points: 4500  Description: "The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells." [GOC:ai, ISBN:0198506732] Available to: Everyone (Tier I)
	GS127934: Retrohippocampal region - Allen Mouse Brain Atlas Figure Label: ABA - Retrohippocampal region Species: Mus musculus  Data Points: 2963  Description: Genes with particular expression in Retrohippocampal region. Available to: Everyone (Tier I)
	GS194111: GO:0097159 organic cyclic compound binding Figure Label: GO:0097159 Species: Homo sapiens  Data Points: 5452  Description: "Interacting selectively and non-covalently with an organic cyclic compound, any molecular entity that contains carbon arranged in a cyclic molecular structure." [CHEBI:33832, GOC:sjw, PMID:7583672] Available to: Everyone (Tier I)
	GS34243: Neocortex Gene expression correlates of Light-Dark Box Percentage time in light in Males BXD Figure Label: NCX LD_PCT_LIGHT_TIME M BXD ILM6v1.1 RankInv Species: Mus musculus  Data Points: 405  Description: Neocortex Gene Expression Correlates for LD_PCT_LIGHT_TIME measured in BXD RI Males obtained using GeneNetwork Neocortex ILM6v1.1 (Feb08) RankInv. The LD_PCT_LIGHT_TIME measures Light-Dark Box Percentage time in light under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS194307: GO:0016043 cellular component organization Figure Label: GO:0016043 Species: Homo sapiens  Data Points: 4097  Description: "A process that results in the assembly, arrangement of constituent parts, or disassembly of a cellular component." [GOC:ai, GOC:jl, GOC:mah] Available to: Everyone (Tier I)
	GS126584: Tetrachlorodibenzodioxin interacting genes (MeSH:D013749) in CTD Figure Label: D013749 [CTD] Species: Homo sapiens  Data Points: 6285  Description: Genes that interact with the MeSH term 'Tetrachlorodibenzodioxin' (D013749). Incorporates data from 726 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS181473: GO:0005488 binding Figure Label: GO:0005488 Species: Mus musculus  Data Points: 10879  Description: "The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule." [GOC:ceb, GOC:mah, ISBN:0198506732] Available to: Everyone (Tier I)
	GS125526: 2,2-bis(4-hydroxyphenyl)-1,1,1-trichloroethane interacting genes (MeSH:C404910) in CTD Figure Label: C404910 [CTD] Species: Homo sapiens  Data Points: 147  Description: Genes that interact with the MeSH term '2,2-bis(4-hydroxyphenyl)-1,1,1-trichloroethane' (C404910). Incorporates data from 30 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS35241: Striatum Gene expression correlates of Maximum startle to 120 db in Females BXD Figure Label: STR ST_MAX_120 F BXD M430v2 RMA Species: Mus musculus  Data Points: 75  Description: Striatum Gene Expression Correlates for ST_MAX_120 measured in BXD RI Females obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The ST_MAX_120 measures Maximum startle to 120 db under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS197244: GO:0044237 cellular metabolic process Figure Label: GO:0044237 Species: Homo sapiens  Data Points: 8595  Description: "The chemical reactions and pathways by which individual cells transform chemical substances." [GOC:go_curators] Available to: Everyone (Tier I)
	GS194088: GO:0003676 nucleic acid binding Figure Label: GO:0003676 Species: Homo sapiens  Data Points: 3310  Description: "Interacting selectively and non-covalently with any nucleic acid." [GOC:jl] Available to: Everyone (Tier I)
	GS127938: Striatum - Allen Mouse Brain Atlas Figure Label: ABA - Striatum Species: Mus musculus  Data Points: 3267  Description: Genes with particular expression in Striatum. Available to: Everyone (Tier I)
	GS178813: GO:0046983 protein dimerization activity Figure Label: GO:0046983 Species: Mus musculus  Data Points: 933  Description: "The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits." [ISBN:0198506732] Available to: Everyone (Tier I)
	GS36292: Whole Brain Gene expression correlates of Open Field InovelTOTAL locomotion (activity beam breaks) in the center in BXD Females Figure Label: WB NOVEL_ACOUNT_1 F BXD M430 RMA Species: Mus musculus  Data Points: 24  Description: Whole Brain Gene Expression Correlates for NOVEL_ACOUNT_1 measured in BXD RI Females obtained using INIA Brain mRNA M430 (Jun06) RMA. The NOVEL_ACOUNT_1 measures Open Field InovelTOTAL locomotion (activity beam breaks) in the center under the domain Morphine. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier III)
	GS186740: GO:0043229 intracellular organelle Figure Label: GO:0043229 Species: Mus musculus  Data Points: 9717  Description: "Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS208012: GO:0044464 cell part Figure Label: GO:0044464 Species: Homo sapiens  Data Points: 14644  Description: "Any constituent part of a cell, the basic structural and functional unit of all organisms." [GOC:jl] Available to: Everyone (Tier I)
	GS87380: Table S1: Additional data file 1 is a table listing the results of two-way ANOVA (FDR < 1%). (Whole Table) [DRG] Figure Label: Basal expression between strains Species: Mus musculus  Data Points: 2693  Description: None - Basal gene expression profiles between C57BL/6J, DBA/2J, 129P3/J, and SWR/J strains DNA microarray Change in gene expression Two-way analysis of variance (ANOVA). 3,457 probe sets (corresponded to 2,870 different transcripts) with significant inter-strain differences (differ by at least 1.2-fold) - False discovery rate [FDR] < 1%, , rank > 3. Such a large disparity in the mouse striatal transcriptome was estimated by comparing nine array replicates prepared per strain from all of the treatment groups. More than half of the identified probe sets exhibited markedly significant results (1,735 with rank > 7). (NIF Method ID 84.1) Available to: Everyone (Tier I)
	GS201239: GO:0046483 heterocycle metabolic process Figure Label: GO:0046483 Species: Homo sapiens  Data Points: 5369  Description: "The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings)." [CHEBI:5686, ISBN:0198506732] Available to: Everyone (Tier I)
	GS188399: GO:0044238 primary metabolic process Figure Label: GO:0044238 Species: Mus musculus  Data Points: 7644  Description: "The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism." [GOC:go_curators, http://www.metacyc.org] Available to: Everyone (Tier I)
	GS184435: GO:0046483 heterocycle metabolic process Figure Label: GO:0046483 Species: Mus musculus  Data Points: 4478  Description: "The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings)." [CHEBI:5686, ISBN:0198506732] Available to: Everyone (Tier I)
	GS195113: GO:0071841 cellular component organization or biogenesis at cellular level Figure Label: GO:0071841 Species: Homo sapiens  Data Points: 3409  Description: "A process that is carried out at the cellular level, and results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellular component." [GOC:mah] Available to: Everyone (Tier I)
	GS182076: GO:0000786 nucleosome Figure Label: GO:0000786 Species: Mus musculus  Data Points: 50  Description: "A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures." [GOC:elh] Available to: Everyone (Tier I)
	GS199906: GO:0034621 cellular macromolecular complex subunit organization Figure Label: GO:0034621 Species: Homo sapiens  Data Points: 689  Description: "Any process carried out at the cellular level by which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a macromolecular complex." [GOC:mah, GOC:mtg_mpo] Available to: Everyone (Tier I)
	GS121614: Cyclic AMP interacting genes (MeSH:D000242) in CTD Figure Label: D000242 [CTD] Species: Homo sapiens  Data Points: 105  Description: Genes that interact with the MeSH term 'Cyclic AMP' (D000242). Incorporates data from 61 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS197018: GO:0032993 protein-DNA complex Figure Label: GO:0032993 Species: Homo sapiens  Data Points: 111  Description: "A macromolecular complex containing both protein and DNA molecules." [GOC:mah] Available to: Everyone (Tier I)
	GS135550: CD4 T cell subset 6 (Cd4ts6, Published QTL Chr 13) Figure Label: QTL-Cd4ts6-Mouse-Chr 13 Species: Mus musculus  Data Points: 359  Description: QTL associated with CD4 T cell subset 6. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (17085794) Available to: Everyone (Tier I)
	GS123916: Aflatoxin B1 interacting genes (MeSH:D016604) in CTD Figure Label: D016604 [CTD] Species: Homo sapiens  Data Points: 1601  Description: Genes that interact with the MeSH term 'Aflatoxin B1' (D016604). Incorporates data from 35 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS177310: GO:1901360 organic cyclic compound metabolic process Figure Label: GO:1901360 Species: Mus musculus  Data Points: 4651  Description: "The chemical reactions and pathways involving organic cyclic compound." [GOC:TermGenie] Available to: Everyone (Tier I)
	GS195733: GO:0022607 cellular component assembly Figure Label: GO:0022607 Species: Homo sapiens  Data Points: 1544  Description: "The aggregation, arrangement and bonding together of a cellular component." [GOC:isa_complete] Available to: Everyone (Tier I)
	GS203491: GO:0051707 response to other organism Figure Label: GO:0051707 Species: Homo sapiens  Data Points: 583  Description: "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism." [GOC:ai] Available to: Everyone (Tier I)
	GS124592: Methylmethacrylate interacting genes (MeSH:D020366) in CTD Figure Label: D020366 [CTD] Species: Homo sapiens  Data Points: 37  Description: Genes that interact with the MeSH term 'Methylmethacrylate' (D020366). Incorporates data from 3 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS182834: GO:0005623 cell Figure Label: GO:0005623 Species: Mus musculus  Data Points: 13187  Description: "The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope." [GOC:go_curators] Available to: Everyone (Tier I)
	GS121965: Amiodarone interacting genes (MeSH:D000638) in CTD Figure Label: D000638 [CTD] Species: Homo sapiens  Data Points: 917  Description: Genes that interact with the MeSH term 'Amiodarone' (D000638). Incorporates data from 64 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS124295: Polychlorinated Biphenyls interacting genes (MeSH:D011078) in CTD Figure Label: D011078 [CTD] Species: Homo sapiens  Data Points: 211  Description: Genes that interact with the MeSH term 'Polychlorinated Biphenyls' (D011078). Incorporates data from 48 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS127928: Lateral septal complex - Allen Mouse Brain Atlas Figure Label: ABA - Lateral septal complex Species: Mus musculus  Data Points: 3096  Description: Genes with particular expression in Lateral septal complex. Available to: Everyone (Tier I)
	GS197016: GO:0032991 macromolecular complex Figure Label: GO:0032991 Species: Homo sapiens  Data Points: 3861  Description: "A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which the constituent parts function together." [GOC:mah] Available to: Everyone (Tier I)
	GS178448: GO:0005634 nucleus Figure Label: GO:0005634 Species: Mus musculus  Data Points: 5247  Description: "A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent." [GOC:go_curators] Available to: Everyone (Tier I)
	GS182474: GO:0043232 intracellular non-membrane-bounded organelle Figure Label: GO:0043232 Species: Mus musculus  Data Points: 2876  Description: "Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes." [GOC:go_curators] Available to: Everyone (Tier I)
	GS199635: GO:0005622 intracellular Figure Label: GO:0005622 Species: Homo sapiens  Data Points: 12561  Description: "The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm." [ISBN:0198506732] Available to: Everyone (Tier I)
	GS136303: modifier of Salmonella typhimurium susceptibility 4 (Msts4, Published QTL Chr 13) Figure Label: QTL-Msts4-Mouse-Chr 13 Species: Mus musculus  Data Points: 524  Description: QTL associated with modifier of Salmonella typhimurium susceptibility 4. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (37654832) Available to: Everyone (Tier I)
	GS34440: Whole Brain Gene expression correlates of Novel environment vertical activity counts minutes 0-15 in BXD Females Figure Label: WB NEPCOUNT15 F BXD M430 RMA Species: Mus musculus  Data Points: 39  Description: Whole Brain Gene Expression Correlates for NEPCOUNT15 measured in BXD RI Females obtained using INIA Brain mRNA M430 (Jun06) RMA. The NEPCOUNT15 measures Novel environment vertical activity counts minutes 0-15 under the domain Morphine. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier III)
	GS127935: Striatum dorsal region - Allen Mouse Brain Atlas Figure Label: ABA - Striatum dorsal region Species: Mus musculus  Data Points: 2918  Description: Genes with particular expression in Striatum dorsal region. Available to: Everyone (Tier I)
	GS185937: GO:0005694 chromosome Figure Label: GO:0005694 Species: Mus musculus  Data Points: 571  Description: "A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information." [ISBN:0198547684] Available to: Everyone (Tier I)
	GS196943: GO:0008152 metabolic process Figure Label: GO:0008152 Species: Homo sapiens  Data Points: 9471  Description: "The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation." [GOC:go_curators, ISBN:0198547684] Available to: Everyone (Tier I)
	GS87381: Table S1: Additional data file 1 is a table listing the results of two-way ANOVA (FDR < 1%). (Whole Table) [DRG] provisional Figure Label: Morphine: Chronic, Acute and Withdrawal - Morphine vs. Control Species: Mus musculus  Data Points: 612  Description: Morphine: Chronic, Acute and Withdrawal - Morphine vs. Control DNA microarray Change in gene expression Control and acute morphine groups received injections of saline in the same time schedule as the chronic group received morphine (thrice daily, 09:00 hours, 13:00 hours, and 17:00 hours, for 4 days using a dosing schedule of 10, 20, 40, and 40 mg / kg morphine on days 1, 2, 3, and 4, respectively). On day 5, acutely treated animals were injected with a single dose of morphine, 20 mg / kg at 09:00 hours, chronic group received 40 mg / kg, and control group received saline. Mice were killed by d Two-way analysis of variance (ANOVA). Morphine treatment altered the expression of 618 transcripts covered by 661 probe sets (false discovery rate [FDR] < 1%, rank > 3). (NIF Method ID 84.2) Available to: Everyone (Tier I)
	GS196941: GO:0008150 biological_process Figure Label: GO:0008150 Species: Homo sapiens  Data Points: 14623  Description: "Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end." [GOC:go_curators, GOC:isa_complete] Available to: Everyone (Tier I)
	GS199634: GO:0005623 cell Figure Label: GO:0005623 Species: Homo sapiens  Data Points: 14645  Description: "The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope." [GOC:go_curators] Available to: Everyone (Tier I)
	GS207271: GO:0042742 defense response to bacterium Figure Label: GO:0042742 Species: Homo sapiens  Data Points: 142  Description: "Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism." [GOC:jl] Available to: Everyone (Tier I)
	GS201256: GO:0044422 organelle part Figure Label: GO:0044422 Species: Homo sapiens  Data Points: 6369  Description: "Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane." [GOC:jl] Available to: Everyone (Tier I)
	GS86497: Table S2: Additional data file 2 - Lists of probe sets of genes with expression altered by acute and chronic morphine (ANOVA; FDR < 1%). C57BL/6J [DRG] provisional Figure Label: Chronic morphine - Morphine vs. Saline Species: Mus musculus  Data Points: 361  Description: Chronic morphine - Morphine vs. Saline DNA microarray Change in gene expression Mice received morphine thrice daily, 09:00 hours, 13:00 hours, and 17:00 hours, for 4 days using a dosing schedule of 10, 20, 40, and 40 mg / kg morphine on days 1, 2, 3, and 4, respectively. On the last day, a final morphine dose of 40 mg / kg was administered at 09:00 hours. The control group received injections of saline in the same time schedule. 4 hours after the last injection the animals were killed. ANOVA; FDR < 1% The results were obtained using fold change (>1.2) of gene expression level compared with the saline control group. (NIF Table ID 135 [86]) Available to: Everyone (Tier I)
	GS201431: GO:0005515 protein binding Figure Label: GO:0005515 Species: Homo sapiens  Data Points: 7336  Description: "Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules)." [GOC:go_curators] Available to: Everyone (Tier I)
	GS208107: GO:0009607 response to biotic stimulus Figure Label: GO:0009607 Species: Homo sapiens  Data Points: 613  Description: "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism." [GOC:hb] Available to: Everyone (Tier I)
	GS206837: GO:0034728 nucleosome organization Figure Label: GO:0034728 Species: Homo sapiens  Data Points: 128  Description: "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of one or more nucleosomes." [GOC:mah] Available to: Everyone (Tier I)
	GS126276: pirinixic acid interacting genes (MeSH:C006253) in CTD Figure Label: C006253 [CTD] Species: Homo sapiens  Data Points: 5075  Description: Genes that interact with the MeSH term 'pirinixic acid' (C006253). Incorporates data from 171 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS177169: GO:0051276 chromosome organization Figure Label: GO:0051276 Species: Mus musculus  Data Points: 610  Description: "A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information." [GOC:ai, GOC:dph, GOC:jl, GOC:mah] Available to: Everyone (Tier I)
	GS35011: Cerebellum Gene expression correlates of Open Field-Total time in perimeter in Females BXD Figure Label: CBL OF_TOT_PERIM_TIME_PCT F BXD M430 RMA Species: Mus musculus  Data Points: 72  Description: Cerebellum Gene Expression Correlates for OF_TOT_PERIM_TIME_PCT measured in BXD RI Females obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The OF_TOT_PERIM_TIME_PCT measures Open Field-Total time in perimeter under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS195110: GO:0071842 cellular component organization at cellular level Figure Label: GO:0071842 Species: Homo sapiens  Data Points: 3307  Description: "A process that is carried out at the cellular level and results in the assembly, arrangement of constituent parts, or disassembly of a cellular component." [GOC:mah] Available to: Everyone (Tier I)
	GS193059: GO:0044446 intracellular organelle part Figure Label: GO:0044446 Species: Mus musculus  Data Points: 4224  Description: "A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane." [GOC:jl] Available to: Everyone (Tier I)
	GS84268: nicotine sensitivity (Published QTL, Chr 13) Figure Label: QTL for nicotine sensitivity on Chr13 at D13Mit59 (37.58 Mbp , Build 37) Species: Mus musculus  Data Points: 524  Description: nicotine sensitivity spans 12.58 - 62.58 Mbp (NCBI Build 37) on Chr13. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS136029: hypertension (Hypt, Published QTL Chr 13) Figure Label: QTL-Hypt-Mouse-Chr 13 Species: Mus musculus  Data Points: 507  Description: QTL associated with hypertension. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (35064678) Available to: Everyone (Tier I)
	GS182074: GO:0000785 chromatin Figure Label: GO:0000785 Species: Mus musculus  Data Points: 266  Description: "The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome." [GOC:elh, PMID:20404130] Available to: Everyone (Tier I)
	GS209564: GO:0043231 intracellular membrane-bounded organelle Figure Label: GO:0043231 Species: Homo sapiens  Data Points: 9574  Description: "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS129100: bone mineral density 3 (Bmd3 Published QTL Chr 13) Figure Label: QTL-Bmd3-Mouse-Chr 13 Species: Mus musculus  Data Points: 221  Description: QTL associated with bone mineral density 3. The confidence interval is Chr13:0-24491963 bp,+strand Available to: Everyone (Tier I)
	GS199909: GO:0034622 cellular macromolecular complex assembly Figure Label: GO:0034622 Species: Homo sapiens  Data Points: 534  Description: "The aggregation, arrangement and bonding together of a set of macromolecules to form a complex, carried out at the cellular level." [GOC:mah] Available to: Everyone (Tier I)
	GS136606: spacial bias during navigation task 2 (Sbnt2, Published QTL Chr 13) Figure Label: QTL-Sbnt2-Mouse-Chr 13 Species: Mus musculus  Data Points: 545  Description: QTL associated with spacial bias during navigation task 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (46945614) Available to: Everyone (Tier I)
	GS136469: p-glycoprotein positive CD4 T cell subset 2 (Pcd4ts2, Published QTL Chr 13) Figure Label: QTL-Pcd4ts2-Mouse-Chr 13 Species: Mus musculus  Data Points: 588  Description: QTL associated with p-glycoprotein positive CD4 T cell subset 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (45152335) Available to: Everyone (Tier I)
	GS183106: GO:0034621 cellular macromolecular complex subunit organization Figure Label: GO:0034621 Species: Mus musculus  Data Points: 490  Description: "Any process carried out at the cellular level by which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a macromolecular complex." [GOC:mah, GOC:mtg_mpo] Available to: Everyone (Tier I)
	GS199272: GO:0043232 intracellular non-membrane-bounded organelle Figure Label: GO:0043232 Species: Homo sapiens  Data Points: 3125  Description: "Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes." [GOC:go_curators] Available to: Everyone (Tier I)
	GS194524: GO:0006325 chromatin organization Figure Label: GO:0006325 Species: Homo sapiens  Data Points: 524  Description: "Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin." [GOC:mah] Available to: Everyone (Tier I)
	GS205047: GO:0006807 nitrogen compound metabolic process Figure Label: GO:0006807 Species: Homo sapiens  Data Points: 5962  Description: "The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium." [CHEBI:51143, GOC:go_curators, GOC:jl, ISBN:0198506732] Available to: Everyone (Tier I)
	GS87101: Table S4: List of Saline-Treated HDAC5 KO vs. Saline-Treated WT Significantly Regulated Genes. [DRG] provisional Figure Label: Saline - Histone deacetylase 5 knockout vs. Wildtype Species: Mus musculus  Data Points: 516  Description: Saline - Histone deacetylase 5 knockout vs. Wildtype DNA microarray increased expression 20 mg / kg / day for 7 days Pair-wise comparisons were made between all 4 conditions (WT Saline, WT Cocaine, KO Saline, KO Cocaine), which generated 4 lists of genes 1.2-fold differentially expressed with a P < 0.05. Genes that were significantly regulated by these criteria in the first duplicate study and validated directly via qPCR were included in the final lists. (NIF Table ID 35 [41]) Available to: Everyone (Tier I)
	GS184629: GO:0005515 protein binding Figure Label: GO:0005515 Species: Mus musculus  Data Points: 6204  Description: "Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules)." [GOC:go_curators] Available to: Everyone (Tier I)
	GS36019: Neocortex Gene expression correlates of Light-Dark Box Total seconds spent in dark compartment in Females & Males BXD Figure Label: NCX LD_DARK_TIME F&M BXD ILM6v1.1 RankInv Species: Mus musculus  Data Points: 378  Description: Neocortex Gene Expression Correlates for LD_DARK_TIME measured in BXD RI Females & Males obtained using GeneNetwork Neocortex ILM6v1.1 (Feb08) RankInv. The LD_DARK_TIME measures Light-Dark Box Total seconds spent in dark compartment under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS202775: GO:0005694 chromosome Figure Label: GO:0005694 Species: Homo sapiens  Data Points: 624  Description: "A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information." [ISBN:0198547684] Available to: Everyone (Tier I)
	GS84150: ethanol conditioned taste aversion (Published QTL, Chr 3) Figure Label: QTL for ethanol conditioned taste aversion on Chr3 at D3Mit11 (111.75 Mbp , Build 37) Species: Mus musculus  Data Points: 631  Description: ethanol conditioned taste aversion spans 86.75 - 136.75 Mbp (NCBI Build 37) on Chr3. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS207004: GO:0006334 nucleosome assembly Figure Label: GO:0006334 Species: Homo sapiens  Data Points: 107  Description: "The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA." [GOC:mah] Available to: Everyone (Tier I)
	GS189780: GO:0043933 macromolecular complex subunit organization Figure Label: GO:0043933 Species: Mus musculus  Data Points: 949  Description: "Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a macromolecular complex." [GOC:mtg_mpo] Available to: Everyone (Tier I)
	GS36134: Neocortex Gene expression correlates of Activity during 1st tone shock pairing in Males BXD Figure Label: NCX LM_PAIR1 M BXD ILM6v1.1 RankInv Species: Mus musculus  Data Points: 232  Description: Neocortex Gene Expression Correlates for LM_PAIR1 measured in BXD RI Males obtained using GeneNetwork Neocortex ILM6v1.1 (Feb08) RankInv. The LM_PAIR1 measures Activity during 1st tone shock pairing under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS127927: Hypothalamus - Allen Mouse Brain Atlas Figure Label: ABA - Hypothalamus Species: Mus musculus  Data Points: 3375  Description: Genes with particular expression in Hypothalamus. Available to: Everyone (Tier I)
	GS203594: GO:0043226 organelle Figure Label: GO:0043226 Species: Homo sapiens  Data Points: 10639  Description: "Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS201592: GO:0009617 response to bacterium Figure Label: GO:0009617 Species: Homo sapiens  Data Points: 349  Description: "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium." [GOC:hb] Available to: Everyone (Tier I)
	GS87399: Table S3: Presented are significant functional categories (GO terms) enriched with genes regulated in response to acute and / or chronic morphine, along with lists of probe sets and gene names classified to each GO category. (Whole Table) [DRG] provisional Figure Label: Chronic morphine - Morphine vs. Saline Species: Mus musculus  Data Points: 41  Description: Chronic morphine - Morphine vs. Saline DNA microarray Change in mRNA abundance Mice received morphine thrice daily, 09:00 hours, 13:00 hours, and 17:00 hours, for 4 days using a dosing schedule of 10, 20, 40, and 40 mg / kg morphine on days 1, 2, 3, and 4, respectively. On the last day, a final morphine dose of 40 mg / kg was administered at 09:00 hours. The control group received injections of saline in the same time schedule. 4 hours after the last injection the animals were killed. ANOVA; Gene Ontology (GO) classification; Fisher's exact test. Transcripts with a fold change greater than 1.2 (false discovery rate [FDR] < 1%). Functional annotation was done for each strain and results are available in the exported results under Comments. (NIF Method ID 203) Available to: Everyone (Tier I)
	GS194527: GO:0006323 DNA packaging Figure Label: GO:0006323 Species: Homo sapiens  Data Points: 153  Description: "Any process in which DNA and associated proteins are formed into a compact, orderly structure." [GOC:mah, ISBN:0815316194] Available to: Everyone (Tier I)
	GS198866: GO:0000785 chromatin Figure Label: GO:0000785 Species: Homo sapiens  Data Points: 296  Description: "The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome." [GOC:elh, PMID:20404130] Available to: Everyone (Tier I)
	GS203593: GO:0043227 membrane-bounded organelle Figure Label: GO:0043227 Species: Homo sapiens  Data Points: 9585  Description: "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS181102: GO:0043228 non-membrane-bounded organelle Figure Label: GO:0043228 Species: Mus musculus  Data Points: 2876  Description: "Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes." [GOC:go_curators] Available to: Everyone (Tier I)
	GS125799: Asbestos, Crocidolite interacting genes (MeSH:D017638) in CTD Figure Label: D017638 [CTD] Species: Homo sapiens  Data Points: 637  Description: Genes that interact with the MeSH term 'Asbestos, Crocidolite' (D017638). Incorporates data from 46 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS127127: Benzo(a)pyrene interacting genes (MeSH:D001564) in CTD Figure Label: D001564 [CTD] Species: Homo sapiens  Data Points: 3171  Description: Genes that interact with the MeSH term 'Benzo(a)pyrene' (D001564). Incorporates data from 239 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS35261: Striatum Gene expression correlates of Maximum startle response to 80 db in Females BXD Figure Label: STR ST_MAX_80 F BXD M430v2 RMA Species: Mus musculus  Data Points: 321  Description: Striatum Gene Expression Correlates for ST_MAX_80 measured in BXD RI Females obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The ST_MAX_80 measures Maximum startle response to 80 db under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS210000: GO:0044446 intracellular organelle part Figure Label: GO:0044446 Species: Homo sapiens  Data Points: 6278  Description: "A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane." [GOC:jl] Available to: Everyone (Tier I)
	GS127924: Cerebral cortex - Allen Mouse Brain Atlas Figure Label: ABA - Cerebral cortex Species: Mus musculus  Data Points: 3289  Description: Genes with particular expression in Cerebral cortex. Available to: Everyone (Tier I)
	GS127166: bisphenol A interacting genes (MeSH:C006780) in CTD Figure Label: C006780 [CTD] Species: Homo sapiens  Data Points: 1122  Description: Genes that interact with the MeSH term 'bisphenol A' (C006780). Incorporates data from 278 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS127925: Hippocampal formation - Allen Mouse Brain Atlas Figure Label: ABA - Hippocampal formation Species: Mus musculus  Data Points: 3384  Description: Genes with particular expression in Hippocampal formation. Available to: Everyone (Tier I)
	GS34233: Neocortex Gene expression correlates of Light-Dark Box Percentage of distance traveled in light compartment in Males BXD Figure Label: NCX LD_PCT_DISTLIGHT M BXD ILM6v1.1 RankInv Species: Mus musculus  Data Points: 105  Description: Neocortex Gene Expression Correlates for LD_PCT_DISTLIGHT measured in BXD RI Males obtained using GeneNetwork Neocortex ILM6v1.1 (Feb08) RankInv. The LD_PCT_DISTLIGHT measures Light-Dark Box Percentage of distance traveled in light compartment under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS194087: GO:0003674 molecular_function Figure Label: GO:0003674 Species: Homo sapiens  Data Points: 15286  Description: "Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions." [GOC:go_curators] Available to: Everyone (Tier I)
	GS177356: GO:0003674 molecular_function Figure Label: GO:0003674 Species: Mus musculus  Data Points: 23365  Description: "Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions." [GOC:go_curators] Available to: Everyone (Tier I)
	GS178885: GO:0003677 DNA binding Figure Label: GO:0003677 Species: Mus musculus  Data Points: 1763  Description: "Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid)." [GOC:dph, GOC:jl, GOC:tb, GOC:vw] Available to: Everyone (Tier I)
	GS180149: GO:0065003 macromolecular complex assembly Figure Label: GO:0065003 Species: Mus musculus  Data Points: 868  Description: "The aggregation, arrangement and bonding together of a set of macromolecules to form a complex." [GOC:jl] Available to: Everyone (Tier I)
	GS203590: GO:0043229 intracellular organelle Figure Label: GO:0043229 Species: Homo sapiens  Data Points: 10624  Description: "Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS177309: GO:1901363 heterocyclic compound binding Figure Label: GO:1901363 Species: Mus musculus  Data Points: 4588  Description: "Interacting selectively and non-covalently with heterocyclic compound." [GOC:TermGenie] Available to: Everyone (Tier I)
	GS136931: vertebral trabecular bone trait 15 (Vtbt15, Published QTL Chr 13) Figure Label: QTL-Vtbt15-Mouse-Chr 13 Species: Mus musculus  Data Points: 588  Description: QTL associated with vertebral trabecular bone trait 15. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (45159272) Available to: Everyone (Tier I)
	GS180166: GO:0008152 metabolic process Figure Label: GO:0008152 Species: Mus musculus  Data Points: 9049  Description: "The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation." [GOC:go_curators, ISBN:0198547684] Available to: Everyone (Tier I)
	GS87137: Table S2: List of probe-sets of genes differentially expressed among the four inbred strains of mice. Gene Ranks [DRG] provisional Figure Label: None - Basal gene expression profiles between 129P3/J, DBA/2J, C57BL/6J and SWR/J strains. Species: Mus musculus  Data Points: 1187  Description: None - Basal gene expression profiles between 129P3/J, DBA/2J, C57BL/6J and SWR/J strains. DNA microarray Change in gene expression GeneChip Operating Software (GCOS, Affymetrix, Santa Clara, CA); Three methods of array normalization: Position-Dependent Nearest Neighbor (PDNN), Robust Multichip Analysis (RMA) and Model-Based Expression Index (MBEI); analysis of variance; one-way ANOVA with the mouse strain as the factor; q-value - method; unpaired t-test. Significance level for each probe-set is presented as rank (Under Comments in Exported data). Significance levels (p-values) of differences between the four inbred strains were calculated for each probe-set using analysis of variance for three pre-processing methods, Position-Dependent Nearest Neighbor (PDNN), Robust Multichip Analysis (RMA) and Model-Based Expression Index (MBEI). A probe-set scored 1, 2 or 3 points if it achieved cut-off at q < 0.01, q < 0.001 or q < 0.0001, respectively, for each of three methods. Every probe-set gets a rank from 0 to 9 (9 = probe-set was highly significant in all three normalization methods, 0 = probe-set reached significance level in none of the three chosen methods). (NIF Table ID 303 [163]) Available to: Everyone (Tier I)
	GS195108: GO:0071844 cellular component assembly at cellular level Figure Label: GO:0071844 Species: Homo sapiens  Data Points: 1126  Description: "A process that is carried out at the cellular level and results in the aggregation, arrangement and bonding together of a cellular component." [GOC:mah] Available to: Everyone (Tier I)
	GS203072: GO:0090304 nucleic acid metabolic process Figure Label: GO:0090304 Species: Homo sapiens  Data Points: 4446  Description: "Any cellular metabolic process involving nucleic acids." [GOC:dph, GOC:tb] Available to: Everyone (Tier I)
	GS177382: GO:0097159 organic cyclic compound binding Figure Label: GO:0097159 Species: Mus musculus  Data Points: 4637  Description: "Interacting selectively and non-covalently with an organic cyclic compound, any molecular entity that contains carbon arranged in a cyclic molecular structure." [CHEBI:33832, GOC:sjw, PMID:7583672] Available to: Everyone (Tier I)
	GS135976: wound healing/regeneration 3 (Heal3, Published QTL Chr 13) Figure Label: QTL-Heal3-Mouse-Chr 13 Species: Mus musculus  Data Points: 374  Description: QTL associated with wound healing/regeneration 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (20587899) Available to: Everyone (Tier I)
	GS201253: GO:0044427 chromosomal part Figure Label: GO:0044427 Species: Homo sapiens  Data Points: 529  Description: "Any constituent part of a chromosome, a structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information." [GOC:jl] Available to: Everyone (Tier I)
	GS127937: Striatum-like amygdalar nuclei - Allen Mouse Brain Atlas Figure Label: ABA - Striatum-like amygdalar nuclei Species: Mus musculus  Data Points: 2944  Description: Genes with particular expression in Striatum-like amygdalar nuclei. Available to: Everyone (Tier I)
	GS206909: GO:0006952 defense response Figure Label: GO:0006952 Species: Homo sapiens  Data Points: 1100  Description: "Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack." [GOC:go_curators] Available to: Everyone (Tier I)
	GS87045: Table S2: Additional data file 2 - Lists of probe sets of genes with expression altered by acute and chronic morphine (ANOVA; FDR < 1%). SWR/J [DRG] provisional Figure Label: Chronic morphine - Morphine vs. Saline Species: Mus musculus  Data Points: 195  Description: Chronic morphine - Morphine vs. Saline DNA microarray Change in gene expression Mice received morphine thrice daily, 09:00 hours, 13:00 hours, and 17:00 hours, for 4 days using a dosing schedule of 10, 20, 40, and 40 mg / kg morphine on days 1, 2, 3, and 4, respectively. On the last day, a final morphine dose of 40 mg / kg was administered at 09:00 hours. The control group received injections of saline in the same time schedule. 4 hours after the last injection the animals were killed. ANOVA; FDR < 1% The results were obtained using fold change (>1.2) of gene expression level compared with the saline control group. (NIF Table ID 137 [90]) Available to: Everyone (Tier I)
	GS129173: pregnancy QTL 3 (Pregq3 Published QTL Chr 13) Figure Label: QTL-Pregq3-Mouse-Chr 13 Species: Mus musculus  Data Points: 592  Description: QTL associated with pregnancy QTL 3. The confidence interval is Chr13:20523211-72374518 bp,+strand Available to: Everyone (Tier I)
	GS127936: Striatum ventral region - Allen Mouse Brain Atlas Figure Label: ABA - Striatum ventral region Species: Mus musculus  Data Points: 2962  Description: Genes with particular expression in Striatum ventral region. Available to: Everyone (Tier I)
	GS199112: GO:0044085 cellular component biogenesis Figure Label: GO:0044085 Species: Homo sapiens  Data Points: 1685  Description: "A process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. Includes biosynthesis of constituent macromolecules, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component." [GOC:jl, GOC:mah] Available to: Everyone (Tier I)
	GS196719: GO:0006259 DNA metabolic process Figure Label: GO:0006259 Species: Homo sapiens  Data Points: 869  Description: "Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides." [ISBN:0198506732] Available to: Everyone (Tier I)
	GS180238: GO:0032993 protein-DNA complex Figure Label: GO:0032993 Species: Mus musculus  Data Points: 87  Description: "A macromolecular complex containing both protein and DNA molecules." [GOC:mah] Available to: Everyone (Tier I)
	GS86517: Table S2: Additional data file 2 - Lists of probe sets of genes with expression altered by acute and chronic morphine (ANOVA; FDR < 1%). 129P3/J [DRG] provisional Figure Label: Chronic morphine - Morphine vs. Saline Species: Mus musculus  Data Points: 159  Description: Chronic morphine - Morphine vs. Saline DNA microarray Change in gene expression Mice received morphine thrice daily, 09:00 hours, 13:00 hours, and 17:00 hours, for 4 days using a dosing schedule of 10, 20, 40, and 40 mg / kg morphine on days 1, 2, 3, and 4, respectively. On the last day, a final morphine dose of 40 mg / kg was administered at 09:00 hours. The control group received injections of saline in the same time schedule. 4 hours after the last injection the animals were killed. ANOVA; FDR < 1% The results were obtained using fold change (>1.2) of gene expression level compared with the saline control group. (NIF Table ID 138 [92]) Available to: Everyone (Tier I)
	GS136341: nicotine induced locomotor activity 7 (Nilac7, Published QTL Chr 13) Figure Label: QTL-Nilac7-Mouse-Chr 13 Species: Mus musculus  Data Points: 370  Description: QTL associated with nicotine induced locomotor activity 7. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (19721387) Available to: Everyone (Tier I)
	GS195214: GO:0009987 cellular process Figure Label: GO:0009987 Species: Homo sapiens  Data Points: 12850  Description: "Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level." [GOC:go_curators, GOC:isa_complete] Available to: Everyone (Tier I)
	GS184452: GO:0044422 organelle part Figure Label: GO:0044422 Species: Mus musculus  Data Points: 4333  Description: "Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane." [GOC:jl] Available to: Everyone (Tier I)
	GS195112: GO:0071840 cellular component organization or biogenesis Figure Label: GO:0071840 Species: Homo sapiens  Data Points: 4213  Description: "A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellular component." [GOC:mah] Available to: Everyone (Tier I)
	GS200648: GO:0044260 cellular macromolecule metabolic process Figure Label: GO:0044260 Species: Homo sapiens  Data Points: 6651  Description: "The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells." [CHEBI:33694, GOC:mah] Available to: Everyone (Tier I)
	GS206657: GO:0043933 macromolecular complex subunit organization Figure Label: GO:0043933 Species: Homo sapiens  Data Points: 1160  Description: "Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a macromolecular complex." [GOC:mtg_mpo] Available to: Everyone (Tier I)
	GS125634: trichostatin A interacting genes (MeSH:C012589) in CTD Figure Label: C012589 [CTD] Species: Homo sapiens  Data Points: 273  Description: Genes that interact with the MeSH term 'trichostatin A' (C012589). Incorporates data from 129 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS203642: GO:0006725 cellular aromatic compound metabolic process Figure Label: GO:0006725 Species: Homo sapiens  Data Points: 5379  Description: "The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells." [GOC:ai, ISBN:0198506732] Available to: Everyone (Tier I)
	GS207923: GO:0034641 cellular nitrogen compound metabolic process Figure Label: GO:0034641 Species: Homo sapiens  Data Points: 5601  Description: "The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells." [GOC:mah] Available to: Everyone (Tier I)
	GS86906: Table S1: Additional data file 1 is a table listing the results of two-way ANOVA (FDR < 1%). Lists of probe sets and gene names altered by strain (3457). [DRG] provisional Figure Label: None - Basal gene expression profiles between C57BL/6J, DBA/2J, 129P3/J, and SWR/J strains Species: Mus musculus  Data Points: 2537  Description: None - Basal gene expression profiles between C57BL/6J, DBA/2J, 129P3/J, and SWR/J strains DNA microarray Change in gene expression Two-way analysis of variance (ANOVA). 3,457 probe sets (corresponded to 2,870 different transcripts) with significant inter-strain differences (differ by at least 1.2-fold) - False discovery rate [FDR] < 1%, , rank > 3. Such a large disparity in the mouse striatal transcriptome was estimated by comparing nine array replicates prepared per strain from all of the treatment groups. More than half of the identified probe sets exhibited markedly significant results (1,735 with rank > 7). (NIF Table ID 134.1 [84.1]) Available to: Everyone (Tier I)
	GS34426: Whole Brain Gene expression correlates of Novel environment vertical activity counts minutes 0-15 in Females BXD Figure Label: WB NEPCOUNT15 F BXD M430 RMA Species: Mus musculus  Data Points: 39  Description: Whole Brain Gene Expression Correlates for NEPCOUNT15 measured in BXD RI Females obtained using INIA Brain mRNA M430 (Jun06) RMA. The NEPCOUNT15 measures Novel environment vertical activity counts minutes 0-15 under the domain Morphine. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS198263: GO:0005488 binding Figure Label: GO:0005488 Species: Homo sapiens  Data Points: 11955  Description: "The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule." [GOC:ceb, GOC:mah, ISBN:0198506732] Available to: Everyone (Tier I)
	GS194040: GO:1901360 organic cyclic compound metabolic process Figure Label: GO:1901360 Species: Homo sapiens  Data Points: 5558  Description: "The chemical reactions and pathways involving organic cyclic compound." [GOC:TermGenie] Available to: Everyone (Tier I)
	GS35271: Striatum Gene expression correlates of Maximum startle response to 85 db in Females BXD Figure Label: STR ST_MAX_85 F BXD M430v2 RMA Species: Mus musculus  Data Points: 427  Description: Striatum Gene Expression Correlates for ST_MAX_85 measured in BXD RI Females obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The ST_MAX_85 measures Maximum startle response to 85 db under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS35779: Neocortex Gene expression correlates of CPP - Time (s) in drug-paired compartment a in Males BXD Figure Label: NCX COCA_BASE_DRUG M BXD ILM6v1.1 RankInv Species: Mus musculus  Data Points: 342  Description: Neocortex Gene Expression Correlates for COCA_BASE_DRUG measured in BXD RI Males obtained using GeneNetwork Neocortex ILM6v1.1 (Feb08) RankInv. The COCA_BASE_DRUG measures CPP - Time (s) in drug-paired compartment a under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS124312: sodium arsenite interacting genes (MeSH:C017947) in CTD Figure Label: C017947 [CTD] Species: Homo sapiens  Data Points: 1398  Description: Genes that interact with the MeSH term 'sodium arsenite' (C017947). Incorporates data from 216 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS177784: GO:0006325 chromatin organization Figure Label: GO:0006325 Species: Mus musculus  Data Points: 471  Description: "Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin." [GOC:mah] Available to: Everyone (Tier I)
	GS194267: GO:0043170 macromolecule metabolic process Figure Label: GO:0043170 Species: Homo sapiens  Data Points: 7311  Description: "The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass." [CHEBI:33694, GOC:mah] Available to: Everyone (Tier I)
	GS180452: GO:0044237 cellular metabolic process Figure Label: GO:0044237 Species: Mus musculus  Data Points: 7552  Description: "The chemical reactions and pathways by which individual cells transform chemical substances." [GOC:go_curators] Available to: Everyone (Tier I)
	GS127939: Thalamus - Allen Mouse Brain Atlas Figure Label: ABA - Thalamus Species: Mus musculus  Data Points: 3315  Description: Genes with particular expression in Thalamus. Available to: Everyone (Tier I)
	GS195570: GO:0046983 protein dimerization activity Figure Label: GO:0046983 Species: Homo sapiens  Data Points: 969  Description: "The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits." [ISBN:0198506732] Available to: Everyone (Tier I)
	GS125069: Sodium Selenite interacting genes (MeSH:D018038) in CTD Figure Label: D018038 [CTD] Species: Homo sapiens  Data Points: 1191  Description: Genes that interact with the MeSH term 'Sodium Selenite' (D018038). Incorporates data from 65 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS1228: Expression patterns of the 77 genes that differentially expressed between brains of wild-type and nAChR beta-4 subunit deficient mice Figure Label: DifExprWT vs. nAChB4 KO Species: Mus musculus  Data Points: 75  Description: Studies using mice with beta4 nicotinic acetylcholine receptor (nAChR) subunit deficiency (beta4-/- mice) helped reveal the roles of this subunit in bradycardiac response to vagal stimulation, nicotine-induced seizure activity and anxiety. To identify genes that might be related to beta4-containing nAChRs activity, we compared the mRNA expression profiles of brains from beta4-/- and wild-type mice using Affymetrix U74Av2 microarray. Seventy-seven genes are significantly differentiated. Available to: Everyone (Tier III)
	GS136440: peak bone density 2 (Pbd2, Published QTL Chr 13) Figure Label: QTL-Pbd2-Mouse-Chr 13 Species: Mus musculus  Data Points: 437  Description: QTL associated with peak bone density 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (29327491) Available to: Everyone (Tier I)
	GS123768: Cyclosporine interacting genes (MeSH:D016572) in CTD Figure Label: D016572 [CTD] Species: Homo sapiens  Data Points: 4389  Description: Genes that interact with the MeSH term 'Cyclosporine' (D016572). Incorporates data from 81 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS178975: GO:0022607 cellular component assembly Figure Label: GO:0022607 Species: Mus musculus  Data Points: 1334  Description: "The aggregation, arrangement and bonding together of a cellular component." [GOC:isa_complete] Available to: Everyone (Tier I)
	GS180164: GO:0008150 biological_process Figure Label: GO:0008150 Species: Mus musculus  Data Points: 23855  Description: "Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end." [GOC:go_curators, GOC:isa_complete] Available to: Everyone (Tier I)
	GS177357: GO:0003676 nucleic acid binding Figure Label: GO:0003676 Species: Mus musculus  Data Points: 2595  Description: "Interacting selectively and non-covalently with any nucleic acid." [GOC:jl] Available to: Everyone (Tier I)
	GS177531: GO:0043170 macromolecule metabolic process Figure Label: GO:0043170 Species: Mus musculus  Data Points: 6435  Description: "The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass." [CHEBI:33694, GOC:mah] Available to: Everyone (Tier I)
	GS178355: GO:0071844 cellular component assembly at cellular level Figure Label: GO:0071844 Species: Mus musculus  Data Points: 926  Description: "A process that is carried out at the cellular level and results in the aggregation, arrangement and bonding together of a cellular component." [GOC:mah] Available to: Everyone (Tier I)
	GS205255: GO:0044238 primary metabolic process Figure Label: GO:0044238 Species: Homo sapiens  Data Points: 8702  Description: "The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism." [GOC:go_curators, http://www.metacyc.org] Available to: Everyone (Tier I)
	GS180236: GO:0032991 macromolecular complex Figure Label: GO:0032991 Species: Mus musculus  Data Points: 3583  Description: "A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which the constituent parts function together." [GOC:mah] Available to: Everyone (Tier I)
	GS177787: GO:0006323 DNA packaging Figure Label: GO:0006323 Species: Mus musculus  Data Points: 101  Description: "Any process in which DNA and associated proteins are formed into a compact, orderly structure." [GOC:mah, ISBN:0815316194] Available to: Everyone (Tier I)
	GS190115: GO:0006334 nucleosome assembly Figure Label: GO:0006334 Species: Mus musculus  Data Points: 54  Description: "The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA." [GOC:mah] Available to: Everyone (Tier I)
	GS203283: GO:0071824 protein-DNA complex subunit organization Figure Label: GO:0071824 Species: Homo sapiens  Data Points: 152  Description: "Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein-DNA complex." [GOC:mah] Available to: Everyone (Tier I)
	GS123048: Tretinoin interacting genes (MeSH:D014212) in CTD Figure Label: D014212 [CTD] Species: Homo sapiens  Data Points: 1760  Description: Genes that interact with the MeSH term 'Tretinoin' (D014212). Incorporates data from 569 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS127930: Midbrain - Allen Mouse Brain Atlas Figure Label: ABA - Midbrain Species: Mus musculus  Data Points: 3343  Description: Genes with particular expression in Midbrain. Available to: Everyone (Tier I)
	GS127933: Pons - Allen Mouse Brain Atlas Figure Label: ABA - Pons Species: Mus musculus  Data Points: 3329  Description: Genes with particular expression in Pons. Available to: Everyone (Tier I)
	GS190116: GO:0006333 chromatin assembly or disassembly Figure Label: GO:0006333 Species: Mus musculus  Data Points: 86  Description: "The formation or destruction of chromatin structures." [GOC:mah] Available to: Everyone (Tier I)
	GS122305: resveratrol interacting genes (MeSH:C059514) in CTD Figure Label: C059514 [CTD] Species: Homo sapiens  Data Points: 627  Description: Genes that interact with the MeSH term 'resveratrol' (C059514). Incorporates data from 328 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS184218: GO:0071704 organic substance metabolic process Figure Label: GO:0071704 Species: Mus musculus  Data Points: 8072  Description: "The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon." [CHEBI:50860, GOC:mah] Available to: Everyone (Tier I)
	GS183109: GO:0034622 cellular macromolecular complex assembly Figure Label: GO:0034622 Species: Mus musculus  Data Points: 422  Description: "The aggregation, arrangement and bonding together of a set of macromolecules to form a complex, carried out at the cellular level." [GOC:mah] Available to: Everyone (Tier I)
	GS183848: GO:0044260 cellular macromolecule metabolic process Figure Label: GO:0044260 Species: Mus musculus  Data Points: 5650  Description: "The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells." [CHEBI:33694, GOC:mah] Available to: Everyone (Tier I)
	GS208954: GO:0006139 nucleobase-containing compound metabolic process Figure Label: GO:0006139 Species: Homo sapiens  Data Points: 5216  Description: "Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids." [GOC:ai] Available to: Everyone (Tier I)
	GS178461: GO:0009987 cellular process Figure Label: GO:0009987 Species: Mus musculus  Data Points: 13263  Description: "Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level." [GOC:go_curators, GOC:isa_complete] Available to: Everyone (Tier I)
	GS189628: GO:0031497 chromatin assembly Figure Label: GO:0031497 Species: Mus musculus  Data Points: 67  Description: "The assembly of DNA, histone proteins, other associated proteins, and sometimes RNA, into chromatin structure, beginning with the formation of the basic unit, the nucleosome, followed by organization of the nucleosomes into higher order structures, ultimately giving rise to a complex organization of specific domains within the nucleus." [http://www.infobiogen.fr/services/chromcancer/IntroItems/ChromatinEducEng.html, PMID:20404130] Available to: Everyone (Tier I)
	GS192624: GO:0043231 intracellular membrane-bounded organelle Figure Label: GO:0043231 Species: Mus musculus  Data Points: 8630  Description: "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS186743: GO:0043227 membrane-bounded organelle Figure Label: GO:0043227 Species: Mus musculus  Data Points: 8650  Description: "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS210507: GO:0006950 response to stress Figure Label: GO:0006950 Species: Homo sapiens  Data Points: 2940  Description: "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation)." [GOC:mah] Available to: Everyone (Tier I)
	GS26220: Striatum Gene expression correlates of Thermal Nociception Hargreaves' Test in Males BXD Figure Label: STR HARGREAVES_MEANBOTH M BXD M430v2 RMA Species: Mus musculus  Data Points: 50  Description: Striatum Gene Expression Correlates for HARGREAVES_MEANBOTH measured in BXD RI Males obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The HARGREAVES_MEANBOTH measures Thermal Nociception Hargreaves' Test under the domain Pain. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS86911: Table S1: Additional data file 1 is a table listing the results of two-way ANOVA (FDR < 1%). Lists of probe sets and gene names altered by morphine treatment (661). [DRG] provisional Figure Label: Morphine: Chronic, Acute and Withdrawal - Morphine vs. Control Species: Mus musculus  Data Points: 612  Description: Morphine: Chronic, Acute and Withdrawal - Morphine vs. Control DNA microarray Change in gene expression Control and acute morphine groups received injections of saline in the same time schedule as the chronic group received morphine (thrice daily, 09:00 hours, 13:00 hours, and 17:00 hours, for 4 days using a dosing schedule of 10, 20, 40, and 40 mg / kg morphine on days 1, 2, 3, and 4, respectively). On day 5, acutely treated animals were injected with a single dose of morphine, 20 mg / kg at 09:00 hours, chronic group received 40 mg / kg, and control group received saline. Mice were killed by d Two-way analysis of variance (ANOVA). Morphine treatment altered the expression of 618 transcripts covered by 661 probe sets (false discovery rate [FDR] < 1%, rank > 3). (NIF Table ID 134.2 [84.2]) Available to: Everyone (Tier I)
	GS193268: GO:0005575 cellular_component Figure Label: GO:0005575 Species: Mus musculus  Data Points: 23784  Description: "The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together." [GOC:go_curators] Available to: Everyone (Tier I)
	GS194039: GO:1901363 heterocyclic compound binding Figure Label: GO:1901363 Species: Homo sapiens  Data Points: 5400  Description: "Interacting selectively and non-covalently with heterocyclic compound." [GOC:TermGenie] Available to: Everyone (Tier I)
	GS188190: GO:0006807 nitrogen compound metabolic process Figure Label: GO:0006807 Species: Mus musculus  Data Points: 4887  Description: "The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium." [CHEBI:51143, GOC:go_curators, GOC:jl, ISBN:0198506732] Available to: Everyone (Tier I)
	GS127923: Cerebellum - Allen Mouse Brain Atlas Figure Label: ABA - Cerebellum Species: Mus musculus  Data Points: 3109  Description: Genes with particular expression in Cerebellum. Available to: Everyone (Tier I)
	GS136884: testis weight QTL 1 (Twq1, Published QTL Chr 13) Figure Label: QTL-Twq1-Mouse-Chr 13 Species: Mus musculus  Data Points: 374  Description: QTL associated with testis weight QTL 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (20523211) Available to: Everyone (Tier I)
	GS86515: Table S2: Additional data file 2 - Lists of probe sets of genes with expression altered by acute and chronic morphine (ANOVA; FDR < 1%). DBA/2J [DRG] provisional Figure Label: Acute morphine - Morphine vs. Saline Species: Mus musculus  Data Points: 349  Description: Acute morphine - Morphine vs. Saline DNA microarray Change in gene expression Control and acute morphine groups received injections of saline in the same time schedule as the chronic group received morphine (thrice daily, 09:00 hours, 13:00 hours, and 17:00 hours, for 4 days using a dosing schedule of 10, 20, 40, and 40 mg / kg morphine on days 1, 2, 3, and 4, respectively). On day 5, acutely treated animals were injected with a single dose of morphine, 20 mg / kg at 09:00 hours (chronic group received 40 mg / kg) and control group received saline. Mice were killed by de ANOVA; FDR < 1% The results were obtained using fold change (>1.2) of gene expression level compared with the saline control group. (NIF Table ID 136 [87]) Available to: Everyone (Tier I)
	GS123595: Progesterone interacting genes (MeSH:D011374) in CTD Figure Label: D011374 [CTD] Species: Homo sapiens  Data Points: 1201  Description: Genes that interact with the MeSH term 'Progesterone' (D011374). Incorporates data from 271 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS182313: GO:0044085 cellular component biogenesis Figure Label: GO:0044085 Species: Mus musculus  Data Points: 1464  Description: "A process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. Includes biosynthesis of constituent macromolecules, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component." [GOC:jl, GOC:mah] Available to: Everyone (Tier I)
	GS192986: GO:0006996 organelle organization Figure Label: GO:0006996 Species: Mus musculus  Data Points: 1870  Description: "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane." [GOC:mah] Available to: Everyone (Tier I)
	GS201023: GO:0071704 organic substance metabolic process Figure Label: GO:0071704 Species: Homo sapiens  Data Points: 9005  Description: "The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon." [CHEBI:50860, GOC:mah] Available to: Everyone (Tier I)
	GS84151: METH responses for body temperature (Published QTL, Chr 3) Figure Label: QTL for METH responses for body temperature on Chr3 at Gnat2 (111.75 Mbp , Build 37) Species: Mus musculus  Data Points: 631  Description: METH responses for body temperature spans 86.75 - 136.75 Mbp (NCBI Build 37) on Chr3. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS191106: GO:0044464 cell part Figure Label: GO:0044464 Species: Mus musculus  Data Points: 13186  Description: "Any constituent part of a cell, the basic structural and functional unit of all organisms." [GOC:jl] Available to: Everyone (Tier I)
	GS177570: GO:0016043 cellular component organization Figure Label: GO:0016043 Species: Mus musculus  Data Points: 3493  Description: "A process that results in the assembly, arrangement of constituent parts, or disassembly of a cellular component." [GOC:ai, GOC:jl, GOC:mah] Available to: Everyone (Tier I)
	GS186227: GO:0090304 nucleic acid metabolic process Figure Label: GO:0090304 Species: Mus musculus  Data Points: 3599  Description: "Any cellular metabolic process involving nucleic acids." [GOC:dph, GOC:tb] Available to: Everyone (Tier I)
	GS34587: Whole Brain Gene expression correlates of Novel environment distance (cm) travelled minutes 0-15 in BXD Females Figure Label: WB NEPDIST15 F BXD M430 RMA Species: Mus musculus  Data Points: 46  Description: Whole Brain Gene Expression Correlates for NEPDIST15 measured in BXD RI Females obtained using INIA Brain mRNA M430 (Jun06) RMA. The NEPDIST15 measures Novel environment distance (cm) travelled minutes 0-15 under the domain Morphine. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier III)
	GS123171: hydroxyhydroquinone interacting genes (MeSH:C013038) in CTD Figure Label: C013038 [CTD] Species: Homo sapiens  Data Points: 51  Description: Genes that interact with the MeSH term 'hydroxyhydroquinone' (C013038). Incorporates data from 1 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS35028: Whole Brain Gene expression correlates of Novel Open Field - TOTAL locomotion (activity beam breaks) in the periphery in Females BXD Figure Label: WB PNOVEL_ACOUNT_1 F BXD M430 RMA Species: Mus musculus  Data Points: 24  Description: Whole Brain Gene Expression Correlates for PNOVEL_ACOUNT_1 measured in BXD RI Females obtained using INIA Brain mRNA M430 (Jun06) RMA. The PNOVEL_ACOUNT_1 measures Novel Open Field - TOTAL locomotion (activity beam breaks) in the periphery under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS136135: lithogenic gene 15 (Lith15, Published QTL Chr 13) Figure Label: QTL-Lith15-Mouse-Chr 13 Species: Mus musculus  Data Points: 529  Description: QTL associated with lithogenic gene 15. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (38855131) Available to: Everyone (Tier I)
	GS184449: GO:0044427 chromosomal part Figure Label: GO:0044427 Species: Mus musculus  Data Points: 490  Description: "Any constituent part of a chromosome, a structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information." [GOC:jl] Available to: Everyone (Tier I)
	GS203494: GO:0051704 multi-organism process Figure Label: GO:0051704 Species: Homo sapiens  Data Points: 1374  Description: "A biological process which involves another organism of the same or different species." [GOC:jl] Available to: Everyone (Tier I)
	GS185585: GO:0044710 single-organism metabolic process Figure Label: GO:0044710 Species: Mus musculus  Data Points: 8414  Description: "A metabolic process - chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances - which involves a single organism." [GOC:jl] Available to: Everyone (Tier I)
	GS189957: GO:0034728 nucleosome organization Figure Label: GO:0034728 Species: Mus musculus  Data Points: 71  Description: "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of one or more nucleosomes." [GOC:mah] Available to: Everyone (Tier I)
	GS86840: Table S3: Presented are significant functional categories (GO terms) enriched with genes regulated in response to acute and / or chronic morphine, along with lists of probe sets and gene names classified to each GO category. [DRG] provisional Figure Label: Chronic morphine - Morphine vs. Saline Species: Mus musculus  Data Points: 41  Description: Chronic morphine - Morphine vs. Saline DNA microarray Change in mRNA abundance Mice received morphine thrice daily, 09:00 hours, 13:00 hours, and 17:00 hours, for 4 days using a dosing schedule of 10, 20, 40, and 40 mg / kg morphine on days 1, 2, 3, and 4, respectively. On the last day, a final morphine dose of 40 mg / kg was administered at 09:00 hours. The control group received injections of saline in the same time schedule. 4 hours after the last injection the animals were killed. ANOVA; Gene Ontology (GO) classification; Fisher's exact test. Transcripts with a fold change greater than 1.2 (false discovery rate [FDR] < 1%). Functional annotation was done for each strain and results are available in the exported results under Comments. (NIF Table ID 342 [203]) Available to: Everyone (Tier I)
	GS197892: GO:0043228 non-membrane-bounded organelle Figure Label: GO:0043228 Species: Homo sapiens  Data Points: 3125  Description: "Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes." [GOC:go_curators] Available to: Everyone (Tier I)
	GS195643: GO:0003677 DNA binding Figure Label: GO:0003677 Species: Homo sapiens  Data Points: 2332  Description: "Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid)." [GOC:dph, GOC:jl, GOC:tb, GOC:vw] Available to: Everyone (Tier I)
	GS209928: GO:0006996 organelle organization Figure Label: GO:0006996 Species: Homo sapiens  Data Points: 2108  Description: "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane." [GOC:mah] Available to: Everyone (Tier I)
	GS127926: Hippocampal region - Allen Mouse Brain Atlas Figure Label: ABA - Hippocampal region Species: Mus musculus  Data Points: 3136  Description: Genes with particular expression in Hippocampal region. Available to: Everyone (Tier I)
	GS194077: GO:0071103 DNA conformation change Figure Label: GO:0071103 Species: Homo sapiens  Data Points: 189  Description: "A cellular process that results in a change in the spatial configuration of a DNA molecule. A conformation change can bend DNA, or alter the, twist, writhe, or linking number of a DNA molecule." [GOC:mah] Available to: Everyone (Tier I)
	GS202415: GO:0044710 single-organism metabolic process Figure Label: GO:0044710 Species: Homo sapiens  Data Points: 9213  Description: "A metabolic process - chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances - which involves a single organism." [GOC:jl] Available to: Everyone (Tier I)
	GS127932: Pallidum - Allen Mouse Brain Atlas Figure Label: ABA - Pallidum Species: Mus musculus  Data Points: 3289  Description: Genes with particular expression in Pallidum. Available to: Everyone (Tier I)
	GS84267: nicotine sensitivity (Published QTL, Chr 13) Figure Label: QTL for nicotine sensitivity on Chr13 at D13Mit218 (22.75 Mbp , Build 37) Species: Mus musculus  Data Points: 535  Description: nicotine sensitivity spans 0.00 - 47.75 Mbp (NCBI Build 37) on Chr13. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS196927: GO:0065003 macromolecular complex assembly Figure Label: GO:0065003 Species: Homo sapiens  Data Points: 994  Description: "The aggregation, arrangement and bonding together of a set of macromolecules to form a complex." [GOC:jl] Available to: Everyone (Tier I)
	GS86920: Table S3: Detailed description of Gene Ontology analysis presented in Table 1 and Table 2. Inter strain GO [DRG] provisional Figure Label: None - Basal gene expression profiles between 129P3/J, DBA/2J, C57BL/6J and SWR/J strains. Species: Mus musculus  Data Points: 321  Description: None - Basal gene expression profiles between 129P3/J, DBA/2J, C57BL/6J and SWR/J strains. DNA microarray Change in gene expression Database for Annotation, Visualization and Integrated Discovery (DAVID 2.1); Fisher exact test The Database for Annotation, Visualization and Integrated Discovery (DAVID 2.1), a functional annotation analysis tool, was used to identify biological themes among gene expression profiles and to group genes into functional classifications. Analyses were performed at level five and default parameters which provides low coverage and relatively high specificity. Over-represented GO groups were found at p < or = to 0.01 level Fisher Exact test. Genes for over-represented GO groups are listed. GO TERM is available under Comments in Exported data. (NIF Table ID 308 [168]) Available to: Everyone (Tier I)
	GS195199: GO:0005634 nucleus Figure Label: GO:0005634 Species: Homo sapiens  Data Points: 5948  Description: "A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent." [GOC:go_curators] Available to: Everyone (Tier I)
	GS195571: GO:0046982 protein heterodimerization activity Figure Label: GO:0046982 Species: Homo sapiens  Data Points: 378  Description: "Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer." [GOC:ai] Available to: Everyone (Tier I)
	GS125090: monomethylarsonous acid interacting genes (MeSH:C406082) in CTD Figure Label: C406082 [CTD] Species: Homo sapiens  Data Points: 172  Description: Genes that interact with the MeSH term 'monomethylarsonous acid' (C406082). Incorporates data from 16 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS127929: Medulla - Allen Mouse Brain Atlas Figure Label: ABA - Medulla Species: Mus musculus  Data Points: 3395  Description: Genes with particular expression in Medulla. Available to: Everyone (Tier I)
	GS177346: GO:0071103 DNA conformation change Figure Label: GO:0071103 Species: Mus musculus  Data Points: 132  Description: "A cellular process that results in a change in the spatial configuration of a DNA molecule. A conformation change can bend DNA, or alter the, twist, writhe, or linking number of a DNA molecule." [GOC:mah] Available to: Everyone (Tier I)
	GS124711: Genistein interacting genes (MeSH:D019833) in CTD Figure Label: D019833 [CTD] Species: Homo sapiens  Data Points: 999  Description: Genes that interact with the MeSH term 'Genistein' (D019833). Incorporates data from 232 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS125548: Doxorubicin interacting genes (MeSH:D004317) in CTD Figure Label: D004317 [CTD] Species: Homo sapiens  Data Points: 794  Description: Genes that interact with the MeSH term 'Doxorubicin' (D004317). Incorporates data from 456 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS127207: 2,6-di-tert-butyl-4-methylene-2,5-cyclohexadienone interacting genes (MeSH:C024709) in CTD Figure Label: C024709 [CTD] Species: Homo sapiens  Data Points: 27  Description: Genes that interact with the MeSH term '2,6-di-tert-butyl-4-methylene-2,5-cyclohexadienone' (C024709). Incorporates data from 3 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS184447: GO:0044424 intracellular part Figure Label: GO:0044424 Species: Mus musculus  Data Points: 11124  Description: "Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm." [GOC:jl] Available to: Everyone (Tier I)
	GS209863: GO:0050896 response to stimulus Figure Label: GO:0050896 Species: Homo sapiens  Data Points: 6585  Description: "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism." [GOC:ai, GOC:bf] Available to: Everyone (Tier I)
	GS178360: GO:0071841 cellular component organization or biogenesis at cellular level Figure Label: GO:0071841 Species: Mus musculus  Data Points: 2872  Description: "A process that is carried out at the cellular level, and results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellular component." [GOC:mah] Available to: Everyone (Tier I)
	GS210212: GO:0005575 cellular_component Figure Label: GO:0005575 Species: Homo sapiens  Data Points: 17054  Description: "The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together." [GOC:go_curators] Available to: Everyone (Tier I)
	GS207006: GO:0006333 chromatin assembly or disassembly Figure Label: GO:0006333 Species: Homo sapiens  Data Points: 139  Description: "The formation or destruction of chromatin structures." [GOC:mah] Available to: Everyone (Tier I)
Select All Add Selected to Project... - Create New Project...