Gene Details

RCN2 and homologs in 5 species are found in 173 GeneSets:

- Entrez   - Ensembl   - GeneNetwork   - STRING   - Comparative Toxicogenomics Database  

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	GS136290: morphine antinociception 2 (Morph2, Published QTL Chr 9) Figure Label: QTL-Morph2-Mouse-Chr 9 Species: Mus musculus  Data Points: 641  Description: QTL associated with morphine antinociception 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (37049651) Available to: Everyone (Tier I)
	GS135298: alcohol preference QTL 1 (Alpq1, Published QTL Chr 9) Figure Label: QTL-Alpq1-Mouse-Chr 9 Species: Mus musculus  Data Points: 610  Description: QTL associated with alcohol preference QTL 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (51931283) Available to: Everyone (Tier I)
	GS136869: triglyceride QTL 1 (Trigq1, Published QTL Chr 9) Figure Label: QTL-Trigq1-Mouse-Chr 9 Species: Mus musculus  Data Points: 615  Description: QTL associated with triglyceride QTL 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (61368699) Available to: Everyone (Tier I)
	GS135716: dermititis 1 (Derm1, Published QTL Chr 9) Figure Label: QTL-Derm1-Mouse-Chr 9 Species: Mus musculus  Data Points: 615  Description: QTL associated with dermititis 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (61368699) Available to: Everyone (Tier I)
	GS136709: susceptibility to lung cancer 10 (Sluc10, Published QTL Chr 9) Figure Label: QTL-Sluc10-Mouse-Chr 9 Species: Mus musculus  Data Points: 642  Description: QTL associated with susceptibility to lung cancer 10. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (37202486) Available to: Everyone (Tier I)
	GS135548: CD4 T cell subset 4 (Cd4ts4, Published QTL Chr 9) Figure Label: QTL-Cd4ts4-Mouse-Chr 9 Species: Mus musculus  Data Points: 522  Description: QTL associated with CD4 T cell subset 4. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (65771581) Available to: Everyone (Tier I)
	GS135619: cholesterol 11 (Chol11, Published QTL Chr 9) Figure Label: QTL-Chol11-Mouse-Chr 9 Species: Mus musculus  Data Points: 605  Description: QTL associated with cholesterol 11. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (49349226) Available to: Everyone (Tier I)
	GS136812: type 2 diabetes modifying QTL 1 (Tdmq1, Published QTL Chr 9) Figure Label: QTL-Tdmq1-Mouse-Chr 9 Species: Mus musculus  Data Points: 630  Description: QTL associated with type 2 diabetes modifying QTL 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (46041438) Available to: Everyone (Tier I)
	GS136117: body length 4 (Lgth4, Published QTL Chr 9) Figure Label: QTL-Lgth4-Mouse-Chr 9 Species: Mus musculus  Data Points: 602  Description: QTL associated with body length 4. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (32308040) Available to: Everyone (Tier I)
	GS135354: BALB/c autoimmunity 1 (Baa1, Published QTL Chr 9) Figure Label: QTL-Baa1-Mouse-Chr 9 Species: Mus musculus  Data Points: 605  Description: QTL associated with BALB/c autoimmunity 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (49317103) Available to: Everyone (Tier I)
	GS136266: modifier of mammary tumor progression 3 (Mmtp3, Published QTL Chr 9) Figure Label: QTL-Mmtp3-Mouse-Chr 9 Species: Mus musculus  Data Points: 624  Description: QTL associated with modifier of mammary tumor progression 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (60421238) Available to: Everyone (Tier I)
	GS199273: GO:0043233 organelle lumen Figure Label: GO:0043233 Species: Homo sapiens  Data Points: 2719  Description: "The internal volume enclosed by the membranes of a particular organelle; includes the volume enclosed by a single organelle membrane, e.g. endoplasmic reticulum lumen, or the volume enclosed by the innermost of the two lipid bilayers of an organelle envelope, e.g. nuclear lumen." [GOC:jl, GOC:mah] Available to: Everyone (Tier I)
	GS84213: differences in cocaine responsiveness (Published QTL, Chr 9) Figure Label: QTL for differences in cocaine responsiveness on Chr9 at Emv-3 (68.73 Mbp , Build 37) Species: Mus musculus  Data Points: 517  Description: differences in cocaine responsiveness spans 43.73 - 93.73 Mbp (NCBI Build 37) on Chr9. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS177404: GO:0005737 cytoplasm Figure Label: GO:0005737 Species: Mus musculus  Data Points: 8406  Description: "All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures." [ISBN:0198547684] Available to: Everyone (Tier I)
	GS201251: GO:0044424 intracellular part Figure Label: GO:0044424 Species: Homo sapiens  Data Points: 12234  Description: "Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm." [GOC:jl] Available to: Everyone (Tier I)
	GS128598: Ethanol Induced Ataxia Chr#9 Figure Label: QTL-Ethanol Ataxia-Mouse-Chr9 Species: Mus musculus  Data Points: 1018  Description: Ethanol Induced Ataxia Chr#9 rs3655717(65312971) with right flanking marker rs13480112(26413932) and left marker rs13480421(111761261). This was mapped in 300 + (b6x129)F2 mice. Available to: Everyone (Tier I)
	GS135351: Alzheimer's disease modifier 3 (Azdm3, Published QTL Chr 9) Figure Label: QTL-Azdm3-Mouse-Chr 9 Species: Mus musculus  Data Points: 530  Description: QTL associated with Alzheimer's disease modifier 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (65425671) Available to: Everyone (Tier I)
	GS135647: cocaine induced activation 10 (Cocia10, Published QTL Chr 9) Figure Label: QTL-Cocia10-Mouse-Chr 9 Species: Mus musculus  Data Points: 677  Description: QTL associated with cocaine induced activation 10. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (41695932) Available to: Everyone (Tier I)
	GS136500: proteoglycan induced arthritis 5 (Pgia5, Published QTL Chr 9) Figure Label: QTL-Pgia5-Mouse-Chr 9 Species: Mus musculus  Data Points: 522  Description: QTL associated with proteoglycan induced arthritis 5. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (65771581) Available to: Everyone (Tier I)
	GS135527: castaneus 10 week body weight 2 (C10bw2, Published QTL Chr 9) Figure Label: QTL-C10bw2-Mouse-Chr 9 Species: Mus musculus  Data Points: 642  Description: QTL associated with castaneus 10 week body weight 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (37202486) Available to: Everyone (Tier I)
	GS136938: vertebral trabecular bone trait 6 (Vtbt6, Published QTL Chr 9) Figure Label: QTL-Vtbt6-Mouse-Chr 9 Species: Mus musculus  Data Points: 619  Description: QTL associated with vertebral trabecular bone trait 6. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (33875129) Available to: Everyone (Tier I)
	GS127324: Emodin interacting genes (MeSH:D004642) in CTD Figure Label: D004642 [CTD] Species: Homo sapiens  Data Points: 96  Description: Genes that interact with the MeSH term 'Emodin' (D004642). Incorporates data from 13 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS136556: protection against vaginal candidiasis 2 (Pvcan2, Published QTL Chr 9) Figure Label: QTL-Pvcan2-Mouse-Chr 9 Species: Mus musculus  Data Points: 638  Description: QTL associated with protection against vaginal candidiasis 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (36839695) Available to: Everyone (Tier I)
	GS84221: differences in cocaine responsiveness (Published QTL, Chr 9) Figure Label: QTL for differences in cocaine responsiveness on Chr9 at Pgm-3 (77.23 Mbp , Build 37) Species: Mus musculus  Data Points: 456  Description: differences in cocaine responsiveness spans 52.23 - 102.23 Mbp (NCBI Build 37) on Chr9. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS196726: GO:0005783 endoplasmic reticulum Figure Label: GO:0005783 Species: Homo sapiens  Data Points: 1281  Description: "The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached)." [ISBN:0198506732] Available to: Everyone (Tier I)
	GS208978: GO:0043169 cation binding Figure Label: GO:0043169 Species: Homo sapiens  Data Points: 4034  Description: "Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge." [GOC:jl] Available to: Everyone (Tier I)
	GS135768: experimental allergic encephalomyelitis susceptibility 9 (Eae9, Published QTL Chr 9) Figure Label: QTL-Eae9-Mouse-Chr 9 Species: Mus musculus  Data Points: 522  Description: QTL associated with experimental allergic encephalomyelitis susceptibility 9. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (65771581) Available to: Everyone (Tier I)
	GS127931: Olfactory bulb - Allen Mouse Brain Atlas Figure Label: ABA - Olfactory bulb Species: Mus musculus  Data Points: 3319  Description: Genes with particular expression in Olfactory bulb. Available to: Everyone (Tier I)
	GS136507: prion incubation determinant 2 (Pid2, Published QTL Chr 9) Figure Label: QTL-Pid2-Mouse-Chr 9 Species: Mus musculus  Data Points: 641  Description: QTL associated with prion incubation determinant 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (37049651) Available to: Everyone (Tier I)
	GS135536: caffeine metabolism QTL 3 (Cafq3, Published QTL Chr 9) Figure Label: QTL-Cafq3-Mouse-Chr 9 Species: Mus musculus  Data Points: 634  Description: QTL associated with caffeine metabolism QTL 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (58210366) Available to: Everyone (Tier I)
	GS36842: Whole Brain Gene expression correlates of Percentage of entries into closed arms of plus maze in Females & Males BXD Figure Label: WB PCT_ENTRIES_CLOSED F&M BXD M430 RMA Species: Mus musculus  Data Points: 147  Description: Whole Brain Gene Expression Correlates for PCT_ENTRIES_CLOSED measured in BXD RI Females & Males obtained using INIA Brain mRNA M430 (Jun06) RMA. The PCT_ENTRIES_CLOSED measures Percentage of entries into closed arms of plus maze under the domain Porsolt. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS135474: brachyury modifier 1 (Brm1, Published QTL Chr 9) Figure Label: QTL-Brm1-Mouse-Chr 9 Species: Mus musculus  Data Points: 632  Description: QTL associated with brachyury modifier 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (57745571) Available to: Everyone (Tier I)
	GS36061: Cerebellum Gene expression correlates of Light- Dark Box Total seconds spent in light compartment in Males BXD Figure Label: CBL LD_LIGHT_TIME M BXD M430 RMA Species: Mus musculus  Data Points: 9  Description: Cerebellum Gene Expression Correlates for LD_LIGHT_TIME measured in BXD RI Males obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The LD_LIGHT_TIME measures Light- Dark Box Total seconds spent in light compartment under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS84218: differences in cocaine responsiveness (Published QTL, Chr 9) Figure Label: QTL for differences in cocaine responsiveness on Chr9 at D9Nds2 (73.94 Mbp , Build 37) Species: Mus musculus  Data Points: 471  Description: differences in cocaine responsiveness spans 48.94 - 98.94 Mbp (NCBI Build 37) on Chr9. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS127926: Hippocampal region - Allen Mouse Brain Atlas Figure Label: ABA - Hippocampal region Species: Mus musculus  Data Points: 3136  Description: Genes with particular expression in Hippocampal region. Available to: Everyone (Tier I)
	GS135949: HDL QTL 17 (Hdlq17, Published QTL Chr 9) Figure Label: QTL-Hdlq17-Mouse-Chr 9 Species: Mus musculus  Data Points: 676  Description: QTL associated with HDL QTL 17. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (43693207) Available to: Everyone (Tier I)
	GS186744: GO:0043226 organelle Figure Label: GO:0043226 Species: Mus musculus  Data Points: 9740  Description: "Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS182835: GO:0005622 intracellular Figure Label: GO:0005622 Species: Mus musculus  Data Points: 11364  Description: "The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm." [ISBN:0198506732] Available to: Everyone (Tier I)
	GS127932: Pallidum - Allen Mouse Brain Atlas Figure Label: ABA - Pallidum Species: Mus musculus  Data Points: 3289  Description: Genes with particular expression in Pallidum. Available to: Everyone (Tier I)
	GS84220: morphine antinociception (Published QTL, Chr 9) Figure Label: QTL for morphine antinociception on Chr9 at D9Mit8 (74.75 Mbp , Build 37) Species: Mus musculus  Data Points: 476  Description: morphine antinociception spans 49.75 - 99.75 Mbp (NCBI Build 37) on Chr9. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS194133: GO:0005737 cytoplasm Figure Label: GO:0005737 Species: Homo sapiens  Data Points: 9128  Description: "All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures." [ISBN:0198547684] Available to: Everyone (Tier I)
	GS83993: cocaine related behavior 9 (Cocrb9, Published QTL, Chr 9) Figure Label: QTL-Cocrb9-Chr9 Species: Mus musculus  Data Points: 476  Description: cocaine related behavior 9 (Cocrb9) spans 49.746096 - 99.746096 Mbp (NCBI Build 37) on Chr 9. Obtained from MGI (http://www.informatics.jax.org) by searching for QTLs containing the keyword . Available to: Everyone (Tier II)
	GS127934: Retrohippocampal region - Allen Mouse Brain Atlas Figure Label: ABA - Retrohippocampal region Species: Mus musculus  Data Points: 2963  Description: Genes with particular expression in Retrohippocampal region. Available to: Everyone (Tier I)
	GS84212: ethanol consumption 3 (Etohc3, Published QTL, Chr 9) Figure Label: QTL-Etohc3-Mouse-Chr 9 Species: Mus musculus  Data Points: 605  Description: ethanol consumption 3 spans 27.27 - 77.27 Mbp (NCBI Build 37) on Chr9. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS189860: GO:0043167 ion binding Figure Label: GO:0043167 Species: Mus musculus  Data Points: 5225  Description: "Interacting selectively and non-covalently with ions, charged atoms or groups of atoms." [GOC:jl] Available to: Everyone (Tier I)
	GS135863: femur breaking strength 6 (Fembrs6, Published QTL Chr 9) Figure Label: QTL-Fembrs6-Mouse-Chr 9 Species: Mus musculus  Data Points: 459  Description: QTL associated with femur breaking strength 6. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (75964912) Available to: Everyone (Tier I)
	GS84217: differences in cocaine responsiveness (Published QTL, Chr 9) Figure Label: QTL for differences in cocaine responsiveness on Chr9 at D9M!t8 (71.95 Mbp , Build 37) Species: Mus musculus  Data Points: 468  Description: differences in cocaine responsiveness spans 46.95 - 96.95 Mbp (NCBI Build 37) on Chr9. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS206742: GO:0043167 ion binding Figure Label: GO:0043167 Species: Homo sapiens  Data Points: 5810  Description: "Interacting selectively and non-covalently with ions, charged atoms or groups of atoms." [GOC:jl] Available to: Everyone (Tier I)
	GS126584: Tetrachlorodibenzodioxin interacting genes (MeSH:D013749) in CTD Figure Label: D013749 [CTD] Species: Homo sapiens  Data Points: 6285  Description: Genes that interact with the MeSH term 'Tetrachlorodibenzodioxin' (D013749). Incorporates data from 726 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS136644: serum IGFBP-5 level QTL 3 (Si5lq3, Published QTL Chr 9) Figure Label: QTL-Si5lq3-Mouse-Chr 9 Species: Mus musculus  Data Points: 602  Description: QTL associated with serum IGFBP-5 level QTL 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (50007830) Available to: Everyone (Tier I)
	GS181473: GO:0005488 binding Figure Label: GO:0005488 Species: Mus musculus  Data Points: 10879  Description: "The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule." [GOC:ceb, GOC:mah, ISBN:0198506732] Available to: Everyone (Tier I)
	GS129130: epilepsy 4 (El4 Published QTL Chr 9) Figure Label: QTL-El4-Mouse-Chr 9 Species: Mus musculus  Data Points: 239  Description: QTL associated with epilepsy 4. The confidence interval is Chr9:49317103-67091973 bp,+strand Available to: Everyone (Tier I)
	GS136118: body length 5 (Lgth5, Published QTL Chr 9) Figure Label: QTL-Lgth5-Mouse-Chr 9 Species: Mus musculus  Data Points: 624  Description: QTL associated with body length 5. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (60421238) Available to: Everyone (Tier I)
	GS213077: Genes with suggestive difference in (PWD) vs (PB6F1 + B6PF1 + B6) comparison Figure Label: PWD specific Species: Mus musculus  Data Points: 5726  Description: Genes with suggestive difference (nonadjusted P-value < 0.05) in expression in prepubertal testes for (PWD) vs (PB6F1 + B6PF1 + B6) comparison Available to: Everyone (Tier III)
	GS135316: alcohol preference 5 QTL (Ap5q, Published QTL Chr 9) Figure Label: QTL-Ap5q-Mouse-Chr 9 Species: Mus musculus  Data Points: 595  Description: QTL associated with alcohol preference 5 QTL. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (46949949) Available to: Everyone (Tier I)
	GS122992: nitrosobenzylmethylamine interacting genes (MeSH:C014707) in CTD Figure Label: C014707 [CTD] Species: Homo sapiens  Data Points: 531  Description: Genes that interact with the MeSH term 'nitrosobenzylmethylamine' (C014707). Incorporates data from 12 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS136166: leishmaniasis resistance 2 (Lmr2, Published QTL Chr 9) Figure Label: QTL-Lmr2-Mouse-Chr 9 Species: Mus musculus  Data Points: 672  Description: QTL associated with leishmaniasis resistance 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (41362343) Available to: Everyone (Tier I)
	GS127929: Medulla - Allen Mouse Brain Atlas Figure Label: ABA - Medulla Species: Mus musculus  Data Points: 3395  Description: Genes with particular expression in Medulla. Available to: Everyone (Tier I)
	GS84222: differences in cocaine responsiveness (Published QTL, Chr 9) Figure Label: QTL for differences in cocaine responsiveness on Chr9 at Mod-i (80.19 Mbp , Build 37) Species: Mus musculus  Data Points: 442  Description: differences in cocaine responsiveness spans 55.19 - 105.19 Mbp (NCBI Build 37) on Chr9. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS198323: GO:0046872 metal ion binding Figure Label: GO:0046872 Species: Homo sapiens  Data Points: 3934  Description: "Interacting selectively and non-covalently with any metal ion." [GOC:ai] Available to: Everyone (Tier I)
	GS127938: Striatum - Allen Mouse Brain Atlas Figure Label: ABA - Striatum Species: Mus musculus  Data Points: 3267  Description: Genes with particular expression in Striatum. Available to: Everyone (Tier I)
	GS184447: GO:0044424 intracellular part Figure Label: GO:0044424 Species: Mus musculus  Data Points: 11124  Description: "Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm." [GOC:jl] Available to: Everyone (Tier I)
	GS186740: GO:0043229 intracellular organelle Figure Label: GO:0043229 Species: Mus musculus  Data Points: 9717  Description: "Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS84219: cocaine related behavior (Published QTL, Chr 9) Figure Label: QTL for cocaine related behaviol on Chr9 at D9Ncvs47 (74.75 Mbp , Build 37) Species: Mus musculus  Data Points: 476  Description: cocaine related behaviol spans 49.75 - 99.75 Mbp (NCBI Build 37) on Chr9. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS135675: cholesterol QTL 4 (Cq4, Published QTL Chr 9) Figure Label: QTL-Cq4-Mouse-Chr 9 Species: Mus musculus  Data Points: 602  Description: QTL associated with cholesterol QTL 4. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (32308040) Available to: Everyone (Tier I)
	GS208012: GO:0044464 cell part Figure Label: GO:0044464 Species: Homo sapiens  Data Points: 14644  Description: "Any constituent part of a cell, the basic structural and functional unit of all organisms." [GOC:jl] Available to: Everyone (Tier I)
	GS87380: Table S1: Additional data file 1 is a table listing the results of two-way ANOVA (FDR < 1%). (Whole Table) [DRG] Figure Label: Basal expression between strains Species: Mus musculus  Data Points: 2693  Description: None - Basal gene expression profiles between C57BL/6J, DBA/2J, 129P3/J, and SWR/J strains DNA microarray Change in gene expression Two-way analysis of variance (ANOVA). 3,457 probe sets (corresponded to 2,870 different transcripts) with significant inter-strain differences (differ by at least 1.2-fold) - False discovery rate [FDR] < 1%, , rank > 3. Such a large disparity in the mouse striatal transcriptome was estimated by comparing nine array replicates prepared per strain from all of the treatment groups. More than half of the identified probe sets exhibited markedly significant results (1,735 with rank > 7). (NIF Method ID 84.1) Available to: Everyone (Tier I)
	GS135676: cholesterol QTL 5 (Cq5, Published QTL Chr 9) Figure Label: QTL-Cq5-Mouse-Chr 9 Species: Mus musculus  Data Points: 605  Description: QTL associated with cholesterol QTL 5. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (49349226) Available to: Everyone (Tier I)
	GS210212: GO:0005575 cellular_component Figure Label: GO:0005575 Species: Homo sapiens  Data Points: 17054  Description: "The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together." [GOC:go_curators] Available to: Everyone (Tier I)
	GS136453: postnatal body weight growth 15 (Pbwg15, Published QTL Chr 9) Figure Label: QTL-Pbwg15-Mouse-Chr 9 Species: Mus musculus  Data Points: 470  Description: QTL associated with postnatal body weight growth 15. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (72664157) Available to: Everyone (Tier I)
	GS136643: serum IGFBP-5 level QTL 2 (Si5lq2, Published QTL Chr 9) Figure Label: QTL-Si5lq2-Mouse-Chr 9 Species: Mus musculus  Data Points: 602  Description: QTL associated with serum IGFBP-5 level QTL 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (32308040) Available to: Everyone (Tier I)
	GS135267: alopecia areata 2 (Alaa2, Published QTL Chr 9) Figure Label: QTL-Alaa2-Mouse-Chr 9 Species: Mus musculus  Data Points: 659  Description: QTL associated with alopecia areata 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (40315883) Available to: Everyone (Tier I)
	GS136140: lithogenic gene 20 (Lith20, Published QTL Chr 9) Figure Label: QTL-Lith20-Mouse-Chr 9 Species: Mus musculus  Data Points: 462  Description: QTL associated with lithogenic gene 20. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (71422152) Available to: Everyone (Tier I)
	GS123718: Ethinyl Estradiol interacting genes (MeSH:D004997) in CTD Figure Label: D004997 [CTD] Species: Homo sapiens  Data Points: 4423  Description: Genes that interact with the MeSH term 'Ethinyl Estradiol' (D004997). Incorporates data from 226 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS182834: GO:0005623 cell Figure Label: GO:0005623 Species: Mus musculus  Data Points: 13187  Description: "The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope." [GOC:go_curators] Available to: Everyone (Tier I)
	GS136794: taste bitterness sensitivity 11 (Taste11, Published QTL Chr 9) Figure Label: QTL-Taste11-Mouse-Chr 9 Species: Mus musculus  Data Points: 457  Description: QTL associated with taste bitterness sensitivity 11. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (76310471) Available to: Everyone (Tier I)
	GS136277: multigenic obesity QTL 8 (Mobq8, Published QTL Chr 9) Figure Label: QTL-Mobq8-Mouse-Chr 9 Species: Mus musculus  Data Points: 457  Description: QTL associated with multigenic obesity QTL 8. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (76310471) Available to: Everyone (Tier I)
	GS127928: Lateral septal complex - Allen Mouse Brain Atlas Figure Label: ABA - Lateral septal complex Species: Mus musculus  Data Points: 3096  Description: Genes with particular expression in Lateral septal complex. Available to: Everyone (Tier I)
	GS196728: GO:0005788 endoplasmic reticulum lumen Figure Label: GO:0005788 Species: Homo sapiens  Data Points: 170  Description: "The volume enclosed by the membranes of the endoplasmic reticulum." [ISBN:0198547684] Available to: Everyone (Tier I)
	GS36031: Cerebellum Gene expression correlates of Light-Dark Box Total seconds spent in dark compartment in Males BXD Figure Label: CBL LD_DARK_TIME M BXD M430 RMA Species: Mus musculus  Data Points: 9  Description: Cerebellum Gene Expression Correlates for LD_DARK_TIME measured in BXD RI Males obtained using SJUT Cerebellum mRNA M430 (Mar05) RMA. The LD_DARK_TIME measures Light-Dark Box Total seconds spent in dark compartment under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS199635: GO:0005622 intracellular Figure Label: GO:0005622 Species: Homo sapiens  Data Points: 12561  Description: "The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm." [ISBN:0198506732] Available to: Everyone (Tier I)
	GS127935: Striatum dorsal region - Allen Mouse Brain Atlas Figure Label: ABA - Striatum dorsal region Species: Mus musculus  Data Points: 2918  Description: Genes with particular expression in Striatum dorsal region. Available to: Everyone (Tier I)
	GS136756: susceptibility to Salmonella typhimurium antigens 7 (Ssta7, Published QTL Chr 9) Figure Label: QTL-Ssta7-Mouse-Chr 9 Species: Mus musculus  Data Points: 634  Description: QTL associated with susceptibility to Salmonella typhimurium antigens 7. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (58210366) Available to: Everyone (Tier I)
	GS199634: GO:0005623 cell Figure Label: GO:0005623 Species: Homo sapiens  Data Points: 14645  Description: "The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope." [GOC:go_curators] Available to: Everyone (Tier I)
	GS135322: APP associated premature death 1 (Appd1, Published QTL Chr 9) Figure Label: QTL-Appd1-Mouse-Chr 9 Species: Mus musculus  Data Points: 662  Description: QTL associated with APP associated premature death 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (40462577) Available to: Everyone (Tier I)
	GS136547: periosteal circumference 6 (Pstc6, Published QTL Chr 9) Figure Label: QTL-Pstc6-Mouse-Chr 9 Species: Mus musculus  Data Points: 530  Description: QTL associated with periosteal circumference 6. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (65425671) Available to: Everyone (Tier I)
	GS201256: GO:0044422 organelle part Figure Label: GO:0044422 Species: Homo sapiens  Data Points: 6369  Description: "Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane." [GOC:jl] Available to: Everyone (Tier I)
	GS135253: adiposity 5 (Adip5, Published QTL Chr 9) Figure Label: QTL-Adip5-Mouse-Chr 9 Species: Mus musculus  Data Points: 457  Description: QTL associated with adiposity 5. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (76310471) Available to: Everyone (Tier I)
	GS135821: ethanol consumption 3 (Etohc3, Published QTL Chr 9) Figure Label: QTL-Etohc3-Mouse-Chr 9 Species: Mus musculus  Data Points: 610  Description: QTL associated with ethanol consumption 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (51931283) Available to: Everyone (Tier I)
	GS136841: T lymphocyte fraction 2 (Tlf2, Published QTL Chr 9) Figure Label: QTL-Tlf2-Mouse-Chr 9 Species: Mus musculus  Data Points: 602  Description: QTL associated with T lymphocyte fraction 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (50007830) Available to: Everyone (Tier I)
	GS135300: alcohol preference QTL 3 (Alpq3, Published QTL Chr 9) Figure Label: QTL-Alpq3-Mouse-Chr 9 Species: Mus musculus  Data Points: 687  Description: QTL associated with alcohol preference QTL 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (37202486) Available to: Everyone (Tier I)
	GS84216: alcohol consumption (Published QTL, Chr 9) Figure Label: QTL for alcohol consumption on Chr9 at D9Mit54 (69.74 Mbp , Build 37) Species: Mus musculus  Data Points: 481  Description: alcohol consumption spans 44.74 - 94.74 Mbp (NCBI Build 37) on Chr9. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS128581: BECs at LORR Recovery Chr# 9 Figure Label: QTL-BEC after LORR-Mouse-Chr9 Species: Mus musculus  Data Points: 1353  Description: BECs at LORR Recovery Chr# 9 rs13480854(7524005) with right flanking marker mCV23893269 (4062079) and left marker rs3663313 (123063108). This was mapped in 300 + (b6x129)F2 mice. Available to: Everyone (Tier I)
	GS84215: differences in cocaine responsiveness (Published QTL, Chr 9) Figure Label: QTL for differences in cocaine responsiveness on Chr9 at Gsta (69.74 Mbp , Build 37) Species: Mus musculus  Data Points: 483  Description: differences in cocaine responsiveness spans 44.74 - 94.74 Mbp (NCBI Build 37) on Chr9. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS84209: morphine antinociception (Published QTL, Chr 9) Figure Label: QTL for morphine antinociception on Chr9 at D9Mit91 (35.00 Mbp , Build 37) Species: Mus musculus  Data Points: 623  Description: morphine antinociception spans 10.00 - 60.00 Mbp (NCBI Build 37) on Chr9. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS126276: pirinixic acid interacting genes (MeSH:C006253) in CTD Figure Label: C006253 [CTD] Species: Homo sapiens  Data Points: 5075  Description: Genes that interact with the MeSH term 'pirinixic acid' (C006253). Incorporates data from 171 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS136163: leishmaniasis resistance 17 (Lmr17, Published QTL Chr 9) Figure Label: QTL-Lmr17-Mouse-Chr 9 Species: Mus musculus  Data Points: 642  Description: QTL associated with leishmaniasis resistance 17. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (37202486) Available to: Everyone (Tier I)
	GS135239: activity response to ethanol 6 (Actre6, Published QTL Chr 9) Figure Label: QTL-Actre6-Mouse-Chr 9 Species: Mus musculus  Data Points: 593  Description: QTL associated with activity response to ethanol 6. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (47439809) Available to: Everyone (Tier I)
	GS136939: vertebral trabecular bone trait 7 (Vtbt7, Published QTL Chr 9) Figure Label: QTL-Vtbt7-Mouse-Chr 9 Species: Mus musculus  Data Points: 595  Description: QTL associated with vertebral trabecular bone trait 7. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (47636700) Available to: Everyone (Tier I)
	GS826: UCSD_CEREBELLUM_Interaction_Reduced_Age_4th Figure Label: UCSD_CEREBELLUM_Interact Species: Mus musculus  Data Points: 541  Description: UCSD_CEREBELLUM_Interaction_Reduced_Age_4th Available to: Everyone (Tier III)
	GS135371: B.burgdorferi-associated arthritis 9 (Bbaa9, Published QTL Chr 9) Figure Label: QTL-Bbaa9-Mouse-Chr 9 Species: Mus musculus  Data Points: 462  Description: QTL associated with B.burgdorferi-associated arthritis 9. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (71422152) Available to: Everyone (Tier I)
	GS209564: GO:0043231 intracellular membrane-bounded organelle Figure Label: GO:0043231 Species: Homo sapiens  Data Points: 9574  Description: "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS197076: GO:0005509 calcium ion binding Figure Label: GO:0005509 Species: Homo sapiens  Data Points: 668  Description: "Interacting selectively and non-covalently with calcium ions (Ca2+)." [GOC:ai] Available to: Everyone (Tier I)
	GS127240: Acetaminophen interacting genes (MeSH:D000082) in CTD Figure Label: D000082 [CTD] Species: Homo sapiens  Data Points: 5725  Description: Genes that interact with the MeSH term 'Acetaminophen' (D000082). Incorporates data from 193 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS35875: Whole Brain Gene expression correlates of Number of entries into closed arms of plus maze in Females & Males BXD Figure Label: WB ENTRIES_CLOSED F&M BXD M430 RMA Species: Mus musculus  Data Points: 147  Description: Whole Brain Gene Expression Correlates for ENTRIES_CLOSED measured in BXD RI Females & Males obtained using INIA Brain mRNA M430 (Jun06) RMA. The ENTRIES_CLOSED measures Number of entries into closed arms of plus maze under the domain Ethanol. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS136038: inflammatory bowel disease QTL 1 (Ibdq1, Published QTL Chr 9) Figure Label: QTL-Ibdq1-Mouse-Chr 9 Species: Mus musculus  Data Points: 632  Description: QTL associated with inflammatory bowel disease QTL 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (57745571) Available to: Everyone (Tier I)
	GS135618: cholesterol 10 (Chol10, Published QTL Chr 9) Figure Label: QTL-Chol10-Mouse-Chr 9 Species: Mus musculus  Data Points: 602  Description: QTL associated with cholesterol 10. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (32308040) Available to: Everyone (Tier I)
	GS127927: Hypothalamus - Allen Mouse Brain Atlas Figure Label: ABA - Hypothalamus Species: Mus musculus  Data Points: 3375  Description: Genes with particular expression in Hypothalamus. Available to: Everyone (Tier I)
	GS203594: GO:0043226 organelle Figure Label: GO:0043226 Species: Homo sapiens  Data Points: 10639  Description: "Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS84214: differences in cocaine responsiveness (Published QTL, CHr 9) Figure Label: QTL for differences in cocaine responsiveness on Chr9 at d (68.73 Mbp , Build 37) Species: Mus musculus  Data Points: 517  Description: differences in cocaine responsiveness spans 43.73 - 93.73 Mbp (NCBI Build 37) on Chr9. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS87011: Table S2: List of Cocaine-Treated HDAC5 KO vs. Cocaine-Treated WT Significantly Regulated Genes. [DRG] provisional Figure Label: Chronic cocaine - Histone deacetylase 5 knockout vs. Wildtype Species: Mus musculus  Data Points: 514  Description: Chronic cocaine - Histone deacetylase 5 knockout vs. Wildtype DNA microarray increased expression 20 mg / kg / day for 7 days The preprocessed data were analyzed using an ANOVA model, and the p-values and fold changes were estimated from the ANOVA model after adjusting for different chips. Pair-wise comparisons were made between all 4 conditions (WT Saline, WT Cocaine, KO Saline, KO Cocaine), which generated 4 lists of genes 1.2-fold differentially expressed with a P < 0.05. Genes that were significantly regulated by these criteria in the first duplicate study and validated directly via qPCR were included in the final lists. (NIF Table ID 33 [39]) Available to: Everyone (Tier I)
	GS210002: GO:0044444 cytoplasmic part Figure Label: GO:0044444 Species: Homo sapiens  Data Points: 6769  Description: "Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures." [GOC:jl] Available to: Everyone (Tier I)
	GS135343: atherosclerosis 29 (Ath29, Published QTL Chr 9) Figure Label: QTL-Ath29-Mouse-Chr 9 Species: Mus musculus  Data Points: 531  Description: QTL associated with atherosclerosis 29. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (65263791) Available to: Everyone (Tier I)
	GS136407: organ weight QTL 7 (Orgwq7, Published QTL Chr 9) Figure Label: QTL-Orgwq7-Mouse-Chr 9 Species: Mus musculus  Data Points: 642  Description: QTL associated with organ weight QTL 7. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (37202486) Available to: Everyone (Tier I)
	GS135911: G protein deficiency-induced colitis 3 (Gpdc3, Published QTL Chr 9) Figure Label: QTL-Gpdc3-Mouse-Chr 9 Species: Mus musculus  Data Points: 467  Description: QTL associated with G protein deficiency-induced colitis 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (73379633) Available to: Everyone (Tier I)
	GS84211: cocaine related behavior (Published QTL, Chr 9) Figure Label: QTL for cocaine related behavior on Chr9 at D9Mit4 (52.27 Mbp , Build 37) Species: Mus musculus  Data Points: 610  Description: cocaine related behavior spans 27.27 - 77.27 Mbp (NCBI Build 37) on Chr9. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	GS203593: GO:0043227 membrane-bounded organelle Figure Label: GO:0043227 Species: Homo sapiens  Data Points: 9585  Description: "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS210000: GO:0044446 intracellular organelle part Figure Label: GO:0044446 Species: Homo sapiens  Data Points: 6278  Description: "A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane." [GOC:jl] Available to: Everyone (Tier I)
	GS127924: Cerebral cortex - Allen Mouse Brain Atlas Figure Label: ABA - Cerebral cortex Species: Mus musculus  Data Points: 3289  Description: Genes with particular expression in Cerebral cortex. Available to: Everyone (Tier I)
	GS127925: Hippocampal formation - Allen Mouse Brain Atlas Figure Label: ABA - Hippocampal formation Species: Mus musculus  Data Points: 3384  Description: Genes with particular expression in Hippocampal formation. Available to: Everyone (Tier I)
	GS83965: cocaine induced activation 10 (Cocia10, Published QTL, Chr 9, MGI:3040201) Figure Label: QTL-Cocia10-Chr9 Species: Mus musculus  Data Points: 668  Description: cocaine induced activation 10 (Cocia10) spans 16.695932 - 66.695932 Mbp (NCBI Build 37) on Chr 9. Obtained from MGI (http://www.informatics.jax.org) by searching for QTLs containing the keyword . Available to: Everyone (Tier II)
	GS194087: GO:0003674 molecular_function Figure Label: GO:0003674 Species: Homo sapiens  Data Points: 15286  Description: "Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions." [GOC:go_curators] Available to: Everyone (Tier I)
	GS177356: GO:0003674 molecular_function Figure Label: GO:0003674 Species: Mus musculus  Data Points: 23365  Description: "Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions." [GOC:go_curators] Available to: Everyone (Tier I)
	GS203590: GO:0043229 intracellular organelle Figure Label: GO:0043229 Species: Homo sapiens  Data Points: 10624  Description: "Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS136801: "body temperature response to dietary restriction, QTL 1" (Tbdr1, Published QTL Chr 9) Figure Label: QTL-Tbdr1-Mouse-Chr 9 Species: Mus musculus  Data Points: 610  Description: QTL associated with "body temperature response to dietary restriction, QTL 1". This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (51931283) Available to: Everyone (Tier I)
	GS136084: keratinocyte stem cell locus 1 (Ksc1, Published QTL Chr 9) Figure Label: QTL-Ksc1-Mouse-Chr 9 Species: Mus musculus  Data Points: 475  Description: QTL associated with keratinocyte stem cell locus 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (75349562) Available to: Everyone (Tier I)
	GS179957: GO:0005783 endoplasmic reticulum Figure Label: GO:0005783 Species: Mus musculus  Data Points: 1149  Description: "The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached)." [ISBN:0198506732] Available to: Everyone (Tier I)
	GS127937: Striatum-like amygdalar nuclei - Allen Mouse Brain Atlas Figure Label: ABA - Striatum-like amygdalar nuclei Species: Mus musculus  Data Points: 2944  Description: Genes with particular expression in Striatum-like amygdalar nuclei. Available to: Everyone (Tier I)
	GS37147: Gene expression change in the nucleus accumbens, following continuous alcohol consumption in alcohol preferring rats. Figure Label: Chronic EtOH changes Species: Rattus norvegicus  Data Points: 350  Description: Differentially expressed in the Nucleus accumbens following 24 hr continuous 9.5g/kg/day alcohol drinking vs. water drinking in alcohol preferring rats. Estimated BAC in the alcohol exposed group was > 85mg%. The 406 significanlty different probe sets represent 374 uniquely named genes, with most gene expression differences in the range of 1.1-1.3 fold. Available to: Everyone (Tier III)
	GS135579: cystic fibrosis modifier QTL 2 (Cfmq2, Published QTL Chr 9) Figure Label: QTL-Cfmq2-Mouse-Chr 9 Species: Mus musculus  Data Points: 602  Description: QTL associated with cystic fibrosis modifier QTL 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (32308040) Available to: Everyone (Tier I)
	GS127936: Striatum ventral region - Allen Mouse Brain Atlas Figure Label: ABA - Striatum ventral region Species: Mus musculus  Data Points: 2962  Description: Genes with particular expression in Striatum ventral region. Available to: Everyone (Tier I)
	GS136764: soft tissue heal 8 (Stheal8, Published QTL Chr 9) Figure Label: QTL-Stheal8-Mouse-Chr 9 Species: Mus musculus  Data Points: 624  Description: QTL associated with soft tissue heal 8. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (60421238) Available to: Everyone (Tier I)
	GS205543: GO:0070013 intracellular organelle lumen Figure Label: GO:0070013 Species: Homo sapiens  Data Points: 2673  Description: "An organelle lumen that is part of an intracellular organelle." [GOC:mah] Available to: Everyone (Tier I)
	GS136024: hypothermia sensitivity (Hts, Published QTL Chr 9) Figure Label: QTL-Hts-Mouse-Chr 9 Species: Mus musculus  Data Points: 604  Description: QTL associated with hypothermia sensitivity. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (49407977) Available to: Everyone (Tier I)
	GS136194: learning contextual 3 (Lrnx3, Published QTL Chr 9) Figure Label: QTL-Lrnx3-Mouse-Chr 9 Species: Mus musculus  Data Points: 462  Description: QTL associated with learning contextual 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (79090292) Available to: Everyone (Tier I)
	GS135595: mean cell hemoglobin concentration QTL 2 (Chcmq2, Published QTL Chr 9) Figure Label: QTL-Chcmq2-Mouse-Chr 9 Species: Mus musculus  Data Points: 605  Description: QTL associated with mean cell hemoglobin concentration QTL 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (49313165) Available to: Everyone (Tier I)
	GS135422: bleomycin-induced pulmonary fibrosis 3 (Blmpf3, Published QTL Chr 9) Figure Label: QTL-Blmpf3-Mouse-Chr 9 Species: Mus musculus  Data Points: 450  Description: QTL associated with bleomycin-induced pulmonary fibrosis 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (79938718) Available to: Everyone (Tier I)
	GS86906: Table S1: Additional data file 1 is a table listing the results of two-way ANOVA (FDR < 1%). Lists of probe sets and gene names altered by strain (3457). [DRG] provisional Figure Label: None - Basal gene expression profiles between C57BL/6J, DBA/2J, 129P3/J, and SWR/J strains Species: Mus musculus  Data Points: 2537  Description: None - Basal gene expression profiles between C57BL/6J, DBA/2J, 129P3/J, and SWR/J strains DNA microarray Change in gene expression Two-way analysis of variance (ANOVA). 3,457 probe sets (corresponded to 2,870 different transcripts) with significant inter-strain differences (differ by at least 1.2-fold) - False discovery rate [FDR] < 1%, , rank > 3. Such a large disparity in the mouse striatal transcriptome was estimated by comparing nine array replicates prepared per strain from all of the treatment groups. More than half of the identified probe sets exhibited markedly significant results (1,735 with rank > 7). (NIF Table ID 134.1 [84.1]) Available to: Everyone (Tier I)
	GS136379: obesity QTL 5 (Obq5, Published QTL Chr 9) Figure Label: QTL-Obq5-Mouse-Chr 9 Species: Mus musculus  Data Points: 677  Description: QTL associated with obesity QTL 5. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (41695932) Available to: Everyone (Tier I)
	GS198263: GO:0005488 binding Figure Label: GO:0005488 Species: Homo sapiens  Data Points: 11955  Description: "The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule." [GOC:ceb, GOC:mah, ISBN:0198506732] Available to: Everyone (Tier I)
	GS86932: Table S3: CORTEX 17K MICROARRAY [DRG] Figure Label: Cocaine-paired vs. Control Species: Rattus norvegicus  Data Points: 4920  Description: Chronic cocaine - Cocaine-paired (conditioned place preference) vs. Control (saline or cocaine-non-paired) DNA microarray All genes on microarray presented After the pre-conditioning phase where animals were allowed access to either compartment for 15 minutes for 4 consecutive days, the conditioning phase for the cocaine-paired groups and cocaine non-paired groups began, consisting of eight subsequent daily sessions. For both groups, cocaine (10 mg / kg) or saline injections were administered on alternate days. For the cocaine-paired groups, rats were immediately placed in one of the two compartments for 30 min with the door in place restricting a z transformation followed by z test and anova followed by Student-Newman-Keuls' post hoc test. Gene expression profile was assessed 24 h after the last conditioning session that corresponded to 48 h after last cocaine exposure, when drug has been eliminated from the body and transient transcriptional changes are likely to be minimal. Therefore, changes in gene expression at this time-point are likely to reflect longer lasting adaptations that may account for maintenance of cocaine-induced memories. The complete lists of normalized gene expression values for the frontal cortex of saline-treated, cocaine non-paired and cocaine-paired groups are presented. Differences in the expression of 39 transcripts in the frontal cortex were related to the conditioned place preference paradigm. These include increases in the level of 22 genes and decreases in 17 genes. (NIF Table ID 130.3 [83.5]) Available to: Everyone (Tier I)
	GS197025: GO:0044432 endoplasmic reticulum part Figure Label: GO:0044432 Species: Homo sapiens  Data Points: 919  Description: "Any constituent part of the endoplasmic reticulum, the irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae." [GOC:jl] Available to: Everyone (Tier I)
	GS136673: skull morphology 12 (Skull12, Published QTL Chr 9) Figure Label: QTL-Skull12-Mouse-Chr 9 Species: Mus musculus  Data Points: 642  Description: QTL associated with skull morphology 12. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (37202486) Available to: Everyone (Tier I)
	GS127939: Thalamus - Allen Mouse Brain Atlas Figure Label: ABA - Thalamus Species: Mus musculus  Data Points: 3315  Description: Genes with particular expression in Thalamus. Available to: Everyone (Tier I)
	GS129137: fecundity QTL 4 (Fecq4 Published QTL Chr 9) Figure Label: QTL-Fecq4-Mouse-Chr 9 Species: Mus musculus  Data Points: 137  Description: QTL associated with fecundity QTL 4. The confidence interval is Chr9:47439809-57745728 bp,+strand Available to: Everyone (Tier I)
	GS135233: activity-distance traveled 4 (Actd4, Published QTL Chr 9) Figure Label: QTL-Actd4-Mouse-Chr 9 Species: Mus musculus  Data Points: 605  Description: QTL associated with activity-distance traveled 4. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (49331368) Available to: Everyone (Tier I)
	GS124286: Benzene interacting genes (MeSH:D001554) in CTD Figure Label: D001554 [CTD] Species: Homo sapiens  Data Points: 358  Description: Genes that interact with the MeSH term 'Benzene' (D001554). Incorporates data from 90 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS123048: Tretinoin interacting genes (MeSH:D014212) in CTD Figure Label: D014212 [CTD] Species: Homo sapiens  Data Points: 1760  Description: Genes that interact with the MeSH term 'Tretinoin' (D014212). Incorporates data from 569 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS135374: body length 4 (Bdln4, Published QTL Chr 9) Figure Label: QTL-Bdln4-Mouse-Chr 9 Species: Mus musculus  Data Points: 517  Description: QTL associated with body length 4. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (67091845) Available to: Everyone (Tier I)
	GS127930: Midbrain - Allen Mouse Brain Atlas Figure Label: ABA - Midbrain Species: Mus musculus  Data Points: 3343  Description: Genes with particular expression in Midbrain. Available to: Everyone (Tier I)
	GS127933: Pons - Allen Mouse Brain Atlas Figure Label: ABA - Pons Species: Mus musculus  Data Points: 3329  Description: Genes with particular expression in Pons. Available to: Everyone (Tier I)
	GS193061: GO:0044444 cytoplasmic part Figure Label: GO:0044444 Species: Mus musculus  Data Points: 5588  Description: "Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures." [GOC:jl] Available to: Everyone (Tier I)
	GS192624: GO:0043231 intracellular membrane-bounded organelle Figure Label: GO:0043231 Species: Mus musculus  Data Points: 8630  Description: "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS186743: GO:0043227 membrane-bounded organelle Figure Label: GO:0043227 Species: Mus musculus  Data Points: 8650  Description: "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	GS192041: GO:0043169 cation binding Figure Label: GO:0043169 Species: Mus musculus  Data Points: 3537  Description: "Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge." [GOC:jl] Available to: Everyone (Tier I)
	GS136674: skull morphology 13 (Skull13, Published QTL Chr 9) Figure Label: QTL-Skull13-Mouse-Chr 9 Species: Mus musculus  Data Points: 457  Description: QTL associated with skull morphology 13. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (76310471) Available to: Everyone (Tier I)
	GS193268: GO:0005575 cellular_component Figure Label: GO:0005575 Species: Mus musculus  Data Points: 23784  Description: "The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together." [GOC:go_curators] Available to: Everyone (Tier I)
	GS35397: Hippocampus Gene expression correlates of Zero Maze - Total Activity count; number of beam breaks in Females & Males BXD Figure Label: HPC ZM_ACTIVITY F&M BXD M430v2 RMA Species: Mus musculus  Data Points: 211  Description: Hippocampus Gene Expression Correlates for ZM_ACTIVITY measured in BXD RI Females & Males obtained using GeneNetwork Hippocampus Consortium M430v2 (Jun06) RMA. The ZM_ACTIVITY measures Zero Maze - Total Activity count; number of beam breaks under the domain Basal Behavior. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	GS127923: Cerebellum - Allen Mouse Brain Atlas Figure Label: ABA - Cerebellum Species: Mus musculus  Data Points: 3109  Description: Genes with particular expression in Cerebellum. Available to: Everyone (Tier I)
	GS86494: Table S1: Hippocampus 17 K microarray data. [DRG] Figure Label: CPP Cocaine-paired vs. Control Species: Rattus norvegicus  Data Points: 4920  Description: Chronic cocaine - Cocaine-paired (conditioned place preference) vs. Control (saline or cocaine-non-paired) DNA microarray All genes on microarray presented After the pre-conditioning phase where animals were allowed access to either compartment for 15 minutes for 4 consecutive days, the conditioning phase for the cocaine-paired groups and cocaine non-paired groups began, consisting of eight subsequent daily sessions. For both groups, cocaine (10 mg / kg) or saline injections were administered on alternate days. For the cocaine-paired groups, rats were immediately placed in one of the two compartments for 30 min with the door in place restricting a z transformation followed by z test and anova followed by Student-Newman-Keuls' post hoc test. Gene expression profile was assessed 24 h after the last conditioning session that corresponded to 48 h after last cocaine exposure, when drug has been eliminated from the body and transient transcriptional changes are likely to be minimal. Therefore, changes in gene expression at this time-point are likely to reflect longer lasting adaptations that may account for maintenance of cocaine-induced memories. The complete lists of normalized gene expression values for the hippocampus of saline-treated, cocaine non-paired and cocaine-paired groups are presented. Analyses revealed that 214 transcripts were differentially regulated in the hippocampus of cocaine-paired rats vs. non-paired and saline-treated controls. Cocaine-induced conditioned place preference caused significant increases in the expression of 151 genes and caused decreases in the expression of 63 genes. (NIF Table ID 130.1 [83]) Available to: Everyone (Tier I)
	GS180296: GO:0005509 calcium ion binding Figure Label: GO:0005509 Species: Mus musculus  Data Points: 528  Description: "Interacting selectively and non-covalently with calcium ions (Ca2+)." [GOC:ai] Available to: Everyone (Tier I)
	GS135660: cocaine related behavior 8 (Cocrb8, Published QTL Chr 9) Figure Label: QTL-Cocrb8-Mouse-Chr 9 Species: Mus musculus  Data Points: 610  Description: QTL associated with cocaine related behavior 8. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (51931283) Available to: Everyone (Tier I)
	GS136550: proteinuria 3 (Ptnu3, Published QTL Chr 9) Figure Label: QTL-Ptnu3-Mouse-Chr 9 Species: Mus musculus  Data Points: 603  Description: QTL associated with proteinuria 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (49786507) Available to: Everyone (Tier I)
	GS1073: ZM_ACTIVITY_Chr9_55.000000-62.000000 Figure Label: ZM_ACTIVITY_Chr9 Species: Mus musculus  Data Points: 104  Description: ZM_ACTIVITY_Chr9_55.000000-62.000000 Available to: Everyone (Tier III)
	GS191106: GO:0044464 cell part Figure Label: GO:0044464 Species: Mus musculus  Data Points: 13186  Description: "Any constituent part of a cell, the basic structural and functional unit of all organisms." [GOC:jl] Available to: Everyone (Tier I)
	GS135485: bone response to mechanical loading 5 (Brml5, Published QTL Chr 9) Figure Label: QTL-Brml5-Mouse-Chr 9 Species: Mus musculus  Data Points: 642  Description: QTL associated with bone response to mechanical loading 5. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (37202486) Available to: Everyone (Tier I)
	GS136009: haloperidol-induced catelepsy 5 (Hpic5, Published QTL Chr 9) Figure Label: QTL-Hpic5-Mouse-Chr 9 Species: Mus musculus  Data Points: 585  Description: QTL associated with haloperidol-induced catelepsy 5. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (31167847) Available to: Everyone (Tier I)
	GS181533: GO:0046872 metal ion binding Figure Label: GO:0046872 Species: Mus musculus  Data Points: 3442  Description: "Interacting selectively and non-covalently with any metal ion." [GOC:ai] Available to: Everyone (Tier I)
	GS194555: GO:0031974 membrane-enclosed lumen Figure Label: GO:0031974 Species: Homo sapiens  Data Points: 2764  Description: "The enclosed volume within a sealed membrane or between two sealed membranes. Encompasses the volume enclosed by the membranes of a particular organelle, e.g. endoplasmic reticulum lumen, or the space between the two lipid bilayers of a double membrane surrounding an organelle, e.g. nuclear envelope lumen." [GOC:add, GOC:mah] Available to: Everyone (Tier I)
	GS84210: alcohol preference QTL 1 (Alpq1 Published QTL, Chr 9) Figure Label: QTL-Alpq1-Mouse-Chr 9 Species: Mus musculus  Data Points: 773  Description: Alcohol preference QTL 1 spans 26931283-76931283 (NCBI Build 37) on Chr9. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Phenotypically extreme HAP1/LAP1 animals (n=96) and HAP2/LAP2 animals (n=48) were screened for microsatellite markers in chromosomal regions previously reported to influence alcohol preference phenotypes. Linkage to alcohol preference, Alpq1, mapped to chromosome 9 near D9Mit4 (29 cM) in the HAP1/LAP1 set and near D9Mit90 (9 cM) in the HAP2/LAP2 set. The Alpq1 QTL interval is broad and may contain more than 1 underlying gene. Drd2 at 28 cM is a potential candidate for Alpq1. Available to: Everyone (Tier II)
	GS121893: Vitamin E interacting genes (MeSH:D014810) in CTD Figure Label: D014810 [CTD] Species: Homo sapiens  Data Points: 1453  Description: Genes that interact with the MeSH term 'Vitamin E' (D014810). Incorporates data from 53 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS125436: quinoline interacting genes (MeSH:C037219) in CTD Figure Label: C037219 [CTD] Species: Homo sapiens  Data Points: 66  Description: Genes that interact with the MeSH term 'quinoline' (C037219). Incorporates data from 15 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	GS83992: cocaine related behavior 8 (Cocrb8, Published QTL, Chr 9) Figure Label: QTL-Cocrb8-Chr9 Species: Mus musculus  Data Points: 610  Description: cocaine related behavior 8 (Cocrb8) spans 26.931283 - 76.931283 Mbp (NCBI Build 37) on Chr 9. Obtained from MGI (http://www.informatics.jax.org) by searching for QTLs containing the keyword . Available to: Everyone (Tier II)
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