Gene Details

SDF2L1 and homologs in 7 species are found in 222 GeneSets:

- Entrez   - GeneNetwork   - Allen Brain Atlas   - Comparative Toxicogenomics Database  

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	Tier II Human 2208 Genes GS238152: [MeSH] Protein Interaction Maps : D060066 Figure Label: Protein Interaction Maps Species: Homo sapiens  Data Points: 2208  Description: Graphs representing sets of measurable, non-covalent physical contacts with specific PROTEINS in living organisms or in cells. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 189 Genes GS227168: MSigDB Geneset - GSE29614_CTRL_VS_DAY7_TIV_FLU_VACCINE_PBMC_DN Figure Label: GSE29614_CTRL_VS_DAY7_TIV_FLU_VACCINE_PBMC_DN Species: Homo sapiens  Data Points: 189  Description: GSE29614_CTRL_VS_DAY7_TIV_FLU_VACCINE_PBMC_DN Genes down-regulated in comparison of peripheral blood mononuclear cells (PBMC) from TIV influenza vaccinee pre-vaccination versus those from day 7 post-vaccination. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse 199 Genes GS229785: MSigDB Geneset - GSE7764_IL15_NK_CELL_24H_VS_SPLENOCYTE_UP Figure Label: GSE7764_IL15_NK_CELL_24H_VS_SPLENOCYTE_UP Species: Mus musculus  Data Points: 199  Description: GSE7764_IL15_NK_CELL_24H_VS_SPLENOCYTE_UP Genes up-regulated in comparison of NK cells treated with IL15 [GeneID=3567] versus total splenocytes. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse 328 Genes GS136847: thymic lymphoma suppressor region 7 (Tlsr7, Published QTL Chr 16) Figure Label: QTL-Tlsr7-Mouse-Chr 16 Species: Mus musculus  Data Points: 328  Description: QTL associated with thymic lymphoma suppressor region 7. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (7134817) Available to: Everyone (Tier I)
	Tier II Human 6374 Genes GS243906: [MeSH] Metabolic Networks and Pathways : D053858 Figure Label: Metabolic Networks and Pathways Species: Homo sapiens  Data Points: 6374  Description: Complex sets of enzymatic reactions connected to each other via their product and substrate metabolites. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 22403 Genes GS244084: [MeSH] Phenotype : D010641 Figure Label: Phenotype Species: Homo sapiens  Data Points: 22403  Description: The outward appearance of the individual. It is the product of interactions between genes, and between the GENOTYPE and the environment. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Mouse 198 Genes GS227584: MSigDB Geneset - GSE14350_TREG_VS_TEFF_IN_IL2RB_KO_DN Figure Label: GSE14350_TREG_VS_TEFF_IN_IL2RB_KO_DN Species: Mus musculus  Data Points: 198  Description: GSE14350_TREG_VS_TEFF_IN_IL2RB_KO_DN Genes down-regulated in comparison of regulatory T cell (Treg) from IL2RB [GeneID=3560] defficient mice versus effector T cells from IL2RB [GeneID=3560] defficient mice. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse GO 5588 Genes GS193061: GO:0044444 cytoplasmic part Figure Label: GO:0044444 Species: Mus musculus  Data Points: 5588  Description: "Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures." [GOC:jl] Available to: Everyone (Tier I)
	Tier I Mouse GO 8630 Genes GS192624: GO:0043231 intracellular membrane-bounded organelle Figure Label: GO:0043231 Species: Mus musculus  Data Points: 8630  Description: "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	Tier II Human 14353 Genes GS244882: [MeSH] Epithelial Cells : D004847 Figure Label: Epithelial Cells Species: Homo sapiens  Data Points: 14353  Description: Cells that line the inner and outer surfaces of the body by forming cellular layers (EPITHELIUM) or masses. Epithelial cells lining the SKIN; the MOUTH; the NOSE; and the ANAL CANAL derive from ectoderm; those lining the RESPIRATORY SYSTEM and the DIGESTIVE SYSTEM derive from endoderm; others (CARDIOVASCULAR SYSTEM and LYMPHATIC SYSTEM) from mesoderm. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 8563 Genes GS234210: [MeSH] HeLa Cells : D006367 Figure Label: HeLa Cells Species: Homo sapiens  Data Points: 8563  Description: The first continuously cultured human malignant CELL LINE, derived from the cervical carcinoma of Henrietta Lacks. These cells are used for VIRUS CULTIVATION and antitumor drug screening assays. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Mouse GO 8650 Genes GS186743: GO:0043227 membrane-bounded organelle Figure Label: GO:0043227 Species: Mus musculus  Data Points: 8650  Description: "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	Tier I Mouse 199 Genes GS229308: MSigDB Geneset - GSE17721_CPG_VS_GARDIQUIMOD_6H_BMDM_UP Figure Label: GSE17721_CPG_VS_GARDIQUIMOD_6H_BMDM_UP Species: Mus musculus  Data Points: 199  Description: GSE17721_CPG_VS_GARDIQUIMOD_6H_BMDM_UP Genes up-regulated in comparison of dendritic cells (DC) stimulated with CpG DNA (TLR9 agonist) at 6 h versus DC cells stimulated with Gardiquimod (TLR7 agonist) at 6 h. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Human 197 Genes GS230501: MSigDB Geneset - GSE17974_0H_VS_24H_IN_VITRO_ACT_CD4_TCELL_DN Figure Label: GSE17974_0H_VS_24H_IN_VITRO_ACT_CD4_TCELL_DN Species: Homo sapiens  Data Points: 197  Description: GSE17974_0H_VS_24H_IN_VITRO_ACT_CD4_TCELL_DN Genes down-regulated in comparison of untreated CD4 [GeneID=920] T cells at 0 h versus the untreated cells at 24 h. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Human 186 Genes GS227846: MSigDB Geneset - V$NKX22_01 Figure Label: V$NKX22_01 Species: Homo sapiens  Data Points: 186  Description: V$NKX22_01 Genes with promoter regions [-2kb,2kb] around transcription start site containing the motif TTAAGTRSTT which matches annotation for NKX2-2: NK2 transcription factor related, locus 2 (Drosophila) c3 - Motif genesets based on conserved cis-regulatory motifs from a comparative analysis of the human, mouse, rat, and dog genomes. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Human CTD 2422 Genes GS123265: Estradiol interacting genes (MeSH:D004958) in CTD Figure Label: D004958 [CTD] Species: Homo sapiens  Data Points: 2422  Description: Genes that interact with the MeSH term 'Estradiol' (D004958). Incorporates data from 764 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	Tier II Human 70216 Genes GS235234: [MeSH] Biochemical Phenomena : D001669 Figure Label: Biochemical Phenomena Species: Homo sapiens  Data Points: 70216  Description: The chemical processes, enzymatic activities, and pathways of living things and related temporal, dimensional, qualitative, and quantitative concepts. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier III Rat 323 Genes GS223646: Serum triglyceride level QTL 12 (Stl12 Published QTL Chr 11) Figure Label: QTL-Stl12-Rat-Chr 11 Species: Rattus norvegicus  Data Points: 323  Description: QTL Associated with Lipid level. On Chromosome 11 with a LOD score= 3.36, p-value =. From a(n) of Available to: Everyone (Tier III)
	Tier I Mouse 296 Genes GS135249: adiposity 17 (Adip17, Published QTL Chr 16) Figure Label: QTL-Adip17-Mouse-Chr 16 Species: Mus musculus  Data Points: 296  Description: QTL associated with adiposity 17. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (3962915) Available to: Everyone (Tier I)
	Tier II Mouse 99 Genes GS35822: Striatum Gene expression correlates of Cocaine CPP - Time (s) in saline paired compartment a in Males BXD Figure Label: STR COCA_TEST_VEHICLE M BXD M430v2 RMA Species: Mus musculus  Data Points: 99  Description: Striatum Gene Expression Correlates for COCA_TEST_VEHICLE measured in BXD RI Males obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The COCA_TEST_VEHICLE measures Cocaine CPP - Time (s) in saline paired compartment a under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	Tier II Mouse 349 Genes GS35852: Striatum Gene expression correlates of Cocaine CPP - difference in time spent relative to baseline drug exposure in Males BXD Figure Label: STR COCA_TIME_COND_CHG M BXD M430v2 RMA Species: Mus musculus  Data Points: 349  Description: Striatum Gene Expression Correlates for COCA_TIME_COND_CHG measured in BXD RI Males obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The COCA_TIME_COND_CHG measures Cocaine CPP - difference in time spent relative to baseline drug exposure under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	Tier I Mouse GO 23778 Genes GS193268: GO:0005575 cellular_component Figure Label: GO:0005575 Species: Mus musculus  Data Points: 23778  Description: "The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together." [GOC:go_curators] Available to: Everyone (Tier I)
	Tier II Human 10106 Genes GS234071: [MeSH] Protein Modification, Translational : D046188 Figure Label: Protein Modification, Translational Species: Homo sapiens  Data Points: 10106  Description: Any of the enzymatically catalyzed modifications of the individual AMINO ACIDS of PROTEINS, and enzymatic cleavage or crosslinking of peptide chains that occur pre-translationally (on the amino acid component of AMINO ACYL TRNA), co-translationally (during the process of GENETIC TRANSLATION), or after translation is completed (POST-TRANSLATIONAL PROTEIN PROCESSING). Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Mouse 199 Genes GS227137: MSigDB Geneset - GSE27786_CD8_TCELL_VS_NKCELL_DN Figure Label: GSE27786_CD8_TCELL_VS_NKCELL_DN Species: Mus musculus  Data Points: 199  Description: GSE27786_CD8_TCELL_VS_NKCELL_DN Genes down-regulated in comparison of CD8 T cells versus NK cells. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 70252 Genes GS238030: [MeSH] Chemical Phenomena : D055598 Figure Label: Chemical Phenomena Species: Homo sapiens  Data Points: 70252  Description: The composition, conformation, and properties of atoms and molecules, and their reaction and interaction processes. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human GO 2711 Genes GS199273: GO:0043233 organelle lumen Figure Label: GO:0043233 Species: Homo sapiens  Data Points: 2711  Description: "The internal volume enclosed by the membranes of a particular organelle; includes the volume enclosed by a single organelle membrane, e.g. endoplasmic reticulum lumen, or the volume enclosed by the innermost of the two lipid bilayers of an organelle envelope, e.g. nuclear lumen." [GOC:jl, GOC:mah] Available to: Everyone (Tier I)
	Tier I Mouse 323 Genes GS129085: brain and behavior QTL 1 (Bbq1 Published QTL Chr 16) Figure Label: QTL-Bbq1-Mouse-Chr 16 Species: Mus musculus  Data Points: 323  Description: QTL associated with brain and behavior QTL 1. The confidence interval is Chr16:6659238-35200932 bp,+strand Available to: Everyone (Tier I)
	Tier II Human 13741 Genes GS238718: [MeSH] Peptide Biosynthesis : D010452 Figure Label: Peptide Biosynthesis Species: Homo sapiens  Data Points: 13741  Description: The production of PEPTIDES or PROTEINS by the constituents of a living organism. The biosynthesis of proteins on RIBOSOMES following an RNA template is termed translation (TRANSLATION, GENETIC). There are other, non-ribosomal peptide biosynthesis (PEPTIDE BIOSYNTHESIS, NUCLEIC ACID-INDEPENDENT) mechanisms carried out by PEPTIDE SYNTHASES and PEPTIDYLTRANSFERASES. Further modifications of peptide chains yield functional peptide and protein molecules. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Mouse 469 Genes GS136964: weight loss response 2 (Wtlr2, Published QTL Chr 16) Figure Label: QTL-Wtlr2-Mouse-Chr 16 Species: Mus musculus  Data Points: 469  Description: QTL associated with weight loss response 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (31984189) Available to: Everyone (Tier I)
	Tier I Human CTD 1204 Genes GS123595: Progesterone interacting genes (MeSH:D011374) in CTD Figure Label: D011374 [CTD] Species: Homo sapiens  Data Points: 1204  Description: Genes that interact with the MeSH term 'Progesterone' (D011374). Incorporates data from 271 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	Tier II Human 13737 Genes GS241165: [MeSH] Protein Biosynthesis : D014176 Figure Label: Protein Biosynthesis Species: Homo sapiens  Data Points: 13737  Description: The biosynthesis of PEPTIDES and PROTEINS on RIBOSOMES, directed by MESSENGER RNA, via TRANSFER RNA that is charged with standard proteinogenic AMINO ACIDS. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Mouse 396 Genes GS135707: diabetes susceptibility QTL 3 (Dbsq3, Published QTL Chr 16) Figure Label: QTL-Dbsq3-Mouse-Chr 16 Species: Mus musculus  Data Points: 396  Description: QTL associated with diabetes susceptibility QTL 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (11616475) Available to: Everyone (Tier I)
	Tier II Human 463 Genes GS241062: [MeSH] Chromosomes, Human, Pair 22 : D002892 Figure Label: Chromosomes, Human, Pair 22 Species: Homo sapiens  Data Points: 463  Description: A specific pair of GROUP G CHROMOSOMES of the human chromosome classification. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human CTD 739 Genes GS126989: Hydralazine interacting genes (MeSH:D006830) in CTD Figure Label: D006830 [CTD] Species: Homo sapiens  Data Points: 739  Description: Genes that interact with the MeSH term 'Hydralazine' (D006830). Incorporates data from 11 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	Tier I Mouse GO 13186 Genes GS191106: GO:0044464 cell part Figure Label: GO:0044464 Species: Mus musculus  Data Points: 13186  Description: "Any constituent part of a cell, the basic structural and functional unit of all organisms." [GOC:jl] Available to: Everyone (Tier I)
	Tier I Mouse GO 8406 Genes GS177404: GO:0005737 cytoplasm Figure Label: GO:0005737 Species: Mus musculus  Data Points: 8406  Description: "All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures." [ISBN:0198547684] Available to: Everyone (Tier I)
	Tier I Human GO 12162 Genes GS201251: GO:0044424 intracellular part Figure Label: GO:0044424 Species: Homo sapiens  Data Points: 12162  Description: "Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm." [GOC:jl] Available to: Everyone (Tier I)
	Tier I Mouse 200 Genes GS227454: MSigDB Geneset - GSE10239_NAIVE_VS_KLRG1HIGH_EFF_CD8_TCELL_DN Figure Label: GSE10239_NAIVE_VS_KLRG1HIGH_EFF_CD8_TCELL_DN Species: Mus musculus  Data Points: 200  Description: GSE10239_NAIVE_VS_KLRG1HIGH_EFF_CD8_TCELL_DN Genes down-regulated in comparison of naive CD8 T cells versus effector CD8 T cells KLRG1 high [GeneID=10219]. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 8197 Genes GS239290: [MeSH] Cell Line, Transformed : D002461 Figure Label: Cell Line, Transformed Species: Homo sapiens  Data Points: 8197  Description: Eukaryotic cell line obtained in a quiescent or stationary phase which undergoes conversion to a state of unregulated growth in culture, resembling an in vitro tumor. It occurs spontaneously or through interaction with viruses, oncogenes, radiation, or drugs/chemicals. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 195 Genes GS227198: MSigDB Geneset - MTOR_UP.N4.V1_UP Figure Label: MTOR_UP.N4.V1_UP Species: Homo sapiens  Data Points: 195  Description: MTOR_UP.N4.V1_UP Genes up-regulated in CEM-C1 cells (T-CLL) by everolimus [PubChem=6442177], an mTOR pathway inhibitor. c6 - Genesets containing oncogenic signatures defined directly from microarray gene expression data from cancer gene perturbations. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse 320 Genes GS136205: lung tumor shape-determining 7 (Ltsd7, Published QTL Chr 16) Figure Label: QTL-Ltsd7-Mouse-Chr 16 Species: Mus musculus  Data Points: 320  Description: QTL associated with lung tumor shape-determining 7. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (6659238) Available to: Everyone (Tier I)
	Tier I Human 200 Genes GS229792: MSigDB Geneset - GSE9006_TYPE_1_VS_TYPE_2_DIABETES_PBMC_AT_DX_UP Figure Label: GSE9006_TYPE_1_VS_TYPE_2_DIABETES_PBMC_AT_DX_UP Species: Homo sapiens  Data Points: 200  Description: GSE9006_TYPE_1_VS_TYPE_2_DIABETES_PBMC_AT_DX_UP Genes up-regulated in peripheral blood mononuclear cells (PBMC) from patients with type 1 diabetes at the time of diagnosis versus those with type 2 diabetes at the time of diagnosis. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier III Rat 453 Genes GS224748: Food consumption QTL 27 (Foco27 Published QTL Chr 11) Figure Label: QTL-Foco27-Rat-Chr 11 Species: Rattus norvegicus  Data Points: 453  Description: QTL Associated with Consumption level. On Chromosome 11 with a LOD score= 16.2, p-value =0.001. From a(n) intercross of Available to: Everyone (Tier III)
	Tier II Mouse 307 Genes GS35867: Striatum Gene expression correlates of Cocaine CPP - difference in percent test time spent relative to preconditioning in Males BXD Figure Label: STR COCA_TIME_PCT_CHANGE M BXD M430v2 RMA Species: Mus musculus  Data Points: 307  Description: Striatum Gene Expression Correlates for COCA_TIME_PCT_CHANGE measured in BXD RI Males obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The COCA_TIME_PCT_CHANGE measures Cocaine CPP - difference in percent test time spent relative to preconditioning under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	Tier II Human 37746 Genes GS240208: [MeSH] Amino Acid Sequence : D000595 Figure Label: Amino Acid Sequence Species: Homo sapiens  Data Points: 37746  Description: The order of amino acids as they occur in a polypeptide chain. This is referred to as the primary structure of proteins. It is of fundamental importance in determining PROTEIN CONFORMATION. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 7666 Genes GS239503: [MeSH] Ubiquitination : D054875 Figure Label: Ubiquitination Species: Homo sapiens  Data Points: 7666  Description: The act of ligating UBIQUITINS to PROTEINS to form ubiquitin-protein ligase complexes to label proteins for transport to the PROTEASOME ENDOPEPTIDASE COMPLEX where proteolysis occurs. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human GO 2756 Genes GS194555: GO:0031974 membrane-enclosed lumen Figure Label: GO:0031974 Species: Homo sapiens  Data Points: 2756  Description: "The enclosed volume within a sealed membrane or between two sealed membranes. Encompasses the volume enclosed by the membranes of a particular organelle, e.g. endoplasmic reticulum lumen, or the space between the two lipid bilayers of a double membrane surrounding an organelle, e.g. nuclear envelope lumen." [GOC:add, GOC:mah] Available to: Everyone (Tier I)
	Tier I Human CTD 1454 Genes GS121893: Vitamin E interacting genes (MeSH:D014810) in CTD Figure Label: D014810 [CTD] Species: Homo sapiens  Data Points: 1454  Description: Genes that interact with the MeSH term 'Vitamin E' (D014810). Incorporates data from 53 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	Tier II Mouse 58 Genes GS35812: Striatum Gene expression correlates of Cocaine CPP - Time (s) in saline paired compartment a in Females & Males BXD Figure Label: STR COCA_TEST_VEHICLE F&M BXD M430v2 RMA Species: Mus musculus  Data Points: 58  Description: Striatum Gene Expression Correlates for COCA_TEST_VEHICLE measured in BXD RI Females & Males obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The COCA_TEST_VEHICLE measures Cocaine CPP - Time (s) in saline paired compartment a under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	Tier II Human 35836 Genes GS242639: [MeSH] Metabolic Phenomena : D055754 Figure Label: Metabolic Phenomena Species: Homo sapiens  Data Points: 35836  Description: The CHEMICAL PROCESSES that occur within the cells, tissues, or an organism and related temporal, spatial, qualitative, and quantitative concepts. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 200 Genes GS229185: MSigDB Geneset - GSE1432_6H_VS_24H_IFNG_MICROGLIA_DN Figure Label: GSE1432_6H_VS_24H_IFNG_MICROGLIA_DN Species: Homo sapiens  Data Points: 200  Description: GSE1432_6H_VS_24H_IFNG_MICROGLIA_DN Genes down-regulated in comparison of microglia cells 6 h after stimulation with IFNG [GeneID=3458] versus microglia cells 24 h after the stimulation. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse 199 Genes GS227715: MSigDB Geneset - GSE17721_LPS_VS_CPG_2H_BMDM_DN Figure Label: GSE17721_LPS_VS_CPG_2H_BMDM_DN Species: Mus musculus  Data Points: 199  Description: GSE17721_LPS_VS_CPG_2H_BMDM_DN Genes down-regulated in comparison of dendritic cells (DC) stimulated with LPS (TLR4 agonist) at 2 h versus DC cells stimulated with CpG DNA (TLR9 agonist) at 2 h. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Mouse 599 Genes GS84293: METH responses for home cage activity (Published QTL, Chr 16) Figure Label: QTL for METH responses for home cage activity on Chr16 at Comt (22.04 Mbp , Build 37) Species: Mus musculus  Data Points: 599  Description: METH responses for home cage activity spans 0.00 - 47.04 Mbp (NCBI Build 37) on Chr16. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	Tier II Human 61866 Genes GS235287: [MeSH] Proteins : D011506 Figure Label: Proteins Species: Homo sapiens  Data Points: 61866  Description: Linear POLYPEPTIDES that are synthesized on RIBOSOMES and may be further modified, crosslinked, cleaved, or assembled into complex proteins with several subunits. The specific sequence of AMINO ACIDS determines the shape the polypeptide will take, during PROTEIN FOLDING, and the function of the protein. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 55514 Genes GS238409: [MeSH] Gene Components : D040461 Figure Label: Gene Components Species: Homo sapiens  Data Points: 55514  Description: The parts of the gene sequence that carry out the different functions of the GENES. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human GO 1276 Genes GS196726: GO:0005783 endoplasmic reticulum Figure Label: GO:0005783 Species: Homo sapiens  Data Points: 1276  Description: "The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached)." [ISBN:0198506732] Available to: Everyone (Tier I)
	Tier II Human 46864 Genes GS243659: [MeSH] RNA, Messenger : D012333 Figure Label: RNA, Messenger Species: Homo sapiens  Data Points: 46864  Description: RNA sequences that serve as templates for protein synthesis. Bacterial mRNAs are generally primary transcripts in that they do not require post-transcriptional processing. Eukaryotic mRNA is synthesized in the nucleus and must be exported to the cytoplasm for translation. Most eukaryotic mRNAs have a sequence of polyadenylic acid at the 3' end, referred to as the poly(A) tail. The function of this tail is not known for certain, but it may play a role in the export of mature mRNA from the nucleus as well as in helping stabilize some mRNA molecules by retarding their degradation in the cytoplasm. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 200 Genes GS229003: MSigDB Geneset - GSE3982_CENT_MEMORY_CD4_TCELL_VS_TH1_DN Figure Label: GSE3982_CENT_MEMORY_CD4_TCELL_VS_TH1_DN Species: Homo sapiens  Data Points: 200  Description: GSE3982_CENT_MEMORY_CD4_TCELL_VS_TH1_DN Genes down-regulated in comparison of central memory CD4 [GeneID=920] T cells versus Th1 cells. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Human 200 Genes GS229883: MSigDB Geneset - HALLMARK_MTORC1_SIGNALING Figure Label: HALLMARK_MTORC1_SIGNALING Species: Homo sapiens  Data Points: 200  Description: HALLMARK_MTORC1_SIGNALING Genes up-regulated through activation of mTORC1 complex. h - Hallmark genesets containing coherently expressed signatures derived by aggregating many MSigDB gene sets to represent well-defined biological states or processes. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse 482 Genes GS136195: learning-contextual 9 (Lrnx9, Published QTL Chr 16) Figure Label: QTL-Lrnx9-Mouse-Chr 16 Species: Mus musculus  Data Points: 482  Description: QTL associated with learning-contextual 9. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (29406628) Available to: Everyone (Tier I)
	Tier II Human 56846 Genes GS235305: [MeSH] DNA, Complementary : D018076 Figure Label: DNA, Complementary Species: Homo sapiens  Data Points: 56846  Description: Single-stranded complementary DNA synthesized from an RNA template by the action of RNA-dependent DNA polymerase. cDNA (i.e., complementary DNA, not circular DNA, not C-DNA) is used in a variety of molecular cloning experiments as well as serving as a specific hybridization probe. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 24839 Genes GS237194: [MeSH] Physiological Phenomena : D010829 Figure Label: Physiological Phenomena Species: Homo sapiens  Data Points: 24839  Description: The functions and properties of living organisms, including both the physical and chemical factors and processes, supporting life in single- or multi-cell organisms from their origin through the progression of life. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 194 Genes GS229390: MSigDB Geneset - GSE12845_PRE_GC_VS_DARKZONE_GC_TONSIL_BCELL_UP Figure Label: GSE12845_PRE_GC_VS_DARKZONE_GC_TONSIL_BCELL_UP Species: Homo sapiens  Data Points: 194  Description: GSE12845_PRE_GC_VS_DARKZONE_GC_TONSIL_BCELL_UP Genes up-regulated in comparison of pre-germinal center B cells versus dark zone germinal center B cells. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 39830 Genes GS245976: [MeSH] Cellular Structures : D022082 Figure Label: Cellular Structures Species: Homo sapiens  Data Points: 39830  Description: Components of a cell. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 67553 Genes GS240572: [MeSH] DNA : D004247 Figure Label: DNA Species: Homo sapiens  Data Points: 67553  Description: A deoxyribonucleotide polymer that is the primary genetic material of all cells. Eukaryotic and prokaryotic organisms normally contain DNA in a double-stranded state, yet several important biological processes transiently involve single-stranded regions. DNA, which consists of a polysugar-phosphate backbone possessing projections of purines (adenine and guanine) and pyrimidines (thymine and cytosine), forms a double helix that is held together by hydrogen bonds between these purines and pyrimidines (adenine to thymine and guanine to cytosine). Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 8519 Genes GS243346: [MeSH] Chromosomes, Human : D002877 Figure Label: Chromosomes, Human Species: Homo sapiens  Data Points: 8519  Description: Very long DNA molecules and associated proteins, HISTONES, and non-histone chromosomal proteins (CHROMOSOMAL PROTEINS, NON-HISTONE). Normally 46 chromosomes, including two sex chromosomes are found in the nucleus of human cells. They carry the hereditary information of the individual. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human GO 10576 Genes GS203594: GO:0043226 organelle Figure Label: GO:0043226 Species: Homo sapiens  Data Points: 10576  Description: "Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	Tier II Human 31495 Genes GS241930: [MeSH] Mutation : D009154 Figure Label: Mutation Species: Homo sapiens  Data Points: 31495  Description: Any detectable and heritable change in the genetic material that causes a change in the GENOTYPE and which is transmitted to daughter cells and to succeeding generations. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 73890 Genes GS239190: [MeSH] Genome : D016678 Figure Label: Genome Species: Homo sapiens  Data Points: 73890  Description: The genetic complement of an organism, including all of its GENES, as represented in its DNA, or in some cases, its RNA. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 32928 Genes GS234668: [MeSH] Open Reading Frames : D016366 Figure Label: Open Reading Frames Species: Homo sapiens  Data Points: 32928  Description: A sequence of successive nucleotide triplets that are read as CODONS specifying AMINO ACIDS and begin with an INITIATOR CODON and end with a stop codon (CODON, TERMINATOR). Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human GO 6743 Genes GS210002: GO:0044444 cytoplasmic part Figure Label: GO:0044444 Species: Homo sapiens  Data Points: 6743  Description: "Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures." [GOC:jl] Available to: Everyone (Tier I)
	Tier I Human 267 Genes GS232704: PC Geneset - "V$COREBINDINGFACTOR_Q6" pathway genes Figure Label: V$COREBINDINGFACTOR_Q6 Species: Homo sapiens  Data Points: 267  Description: Pathway Commons (PC) Geneset. This geneset contains genes that participate in the "V$COREBINDINGFACTOR_Q6" pathway. This set was automatically constructed using the PC API. The original source of this geneset is TRANSFAC. gene2pc v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse 476 Genes GS135393: body growth early QTL 15 (Bgeq15, Published QTL Chr 16) Figure Label: QTL-Bgeq15-Mouse-Chr 16 Species: Mus musculus  Data Points: 476  Description: QTL associated with body growth early QTL 15. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (22956575) Available to: Everyone (Tier I)
	Tier II Human 43280 Genes GS236911: [MeSH] Transcription, Genetic : D014158 Figure Label: Transcription, Genetic Species: Homo sapiens  Data Points: 43280  Description: The biosynthesis of RNA carried out on a template of DNA. The biosynthesis of DNA from an RNA template is called REVERSE TRANSCRIPTION. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 65203 Genes GS235942: [MeSH] Genetic Processes : D039361 Figure Label: Genetic Processes Species: Homo sapiens  Data Points: 65203  Description: Those biological processes that are involved in the transmission of hereditary traits from one organism to another. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 258 Genes GS232229: PC Geneset - "V$TTF1_Q6" pathway genes Figure Label: V$TTF1_Q6 Species: Homo sapiens  Data Points: 258  Description: Pathway Commons (PC) Geneset. This geneset contains genes that participate in the "V$TTF1_Q6" pathway. This set was automatically constructed using the PC API. The original source of this geneset is TRANSFAC. gene2pc v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 10106 Genes GS245913: [MeSH] Protein Processing, Post-Translational : D011499 Figure Label: Protein Processing, Post-Translational Species: Homo sapiens  Data Points: 10106  Description: Any of various enzymatically catalyzed post-translational modifications of PEPTIDES or PROTEINS in the cell of origin. These modifications include carboxylation; HYDROXYLATION; ACETYLATION; PHOSPHORYLATION; METHYLATION; GLYCOSYLATION; ubiquitination; oxidation; proteolysis; and crosslinking and result in changes in molecular weight and electrophoretic motility. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 187 Genes GS230009: MSigDB Geneset - GSE29614_DAY3_VS_DAY7_TIV_FLU_VACCINE_PBMC_DN Figure Label: GSE29614_DAY3_VS_DAY7_TIV_FLU_VACCINE_PBMC_DN Species: Homo sapiens  Data Points: 187  Description: GSE29614_DAY3_VS_DAY7_TIV_FLU_VACCINE_PBMC_DN Genes down-regulated in comparison of peripheral blood mononuclear cells (PBMC) from TIV influenza vaccinee at day 3 post-vaccination versus those at day 7 post-vaccination. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse GO 9740 Genes GS186744: GO:0043226 organelle Figure Label: GO:0043226 Species: Mus musculus  Data Points: 9740  Description: "Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	Tier I Human 199 Genes GS230579: MSigDB Geneset - GSE17974_CTRL_VS_ACT_IL4_AND_ANTI_IL12_24H_CD4_TCELL_DN Figure Label: GSE17974_CTRL_VS_ACT_IL4_AND_ANTI_IL12_24H_CD4_TCELL_DN Species: Homo sapiens  Data Points: 199  Description: GSE17974_CTRL_VS_ACT_IL4_AND_ANTI_IL12_24H_CD4_TCELL_DN Genes down-regulated in comparison of untreated CD4 [GeneID=920] T cells at 0 h versus the cells treated with IL4 [GeneID=3565] and anti-IL12 at 24 h. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse GO 11364 Genes GS182835: GO:0005622 intracellular Figure Label: GO:0005622 Species: Mus musculus  Data Points: 11364  Description: "The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm." [ISBN:0198506732] Available to: Everyone (Tier I)
	Tier I Human GO 9526 Genes GS203593: GO:0043227 membrane-bounded organelle Figure Label: GO:0043227 Species: Homo sapiens  Data Points: 9526  Description: "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	Tier II Human 16267 Genes GS243838: [MeSH] Nuclear Proteins : D009687 Figure Label: Nuclear Proteins Species: Homo sapiens  Data Points: 16267  Description: Proteins found in the nucleus of a cell. Do not confuse with NUCLEOPROTEINS which are proteins conjugated with nucleic acids, that are not necessarily present in the nucleus. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 79329 Genes GS243722: [MeSH] Genetic Structures : D040342 Figure Label: Genetic Structures Species: Homo sapiens  Data Points: 79329  Description: The biological objects that contain genetic information and that are involved in transmitting genetically encoded traits from one organism to another. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier III Mouse 6189 Genes GS213074: Genes with suggestive difference in (B6PF1) vs (PB6F1 + B6 + PWD) comparison Figure Label: B6PF1 specific Species: Mus musculus  Data Points: 6189  Description: Genes with suggestive difference (nonadjusted P-value < 0.05) in expression in prepubertal testes for (B6PF1) vs (PB6F1 + B6 + PWD) comparison Available to: Everyone (Tier III)
	Tier II Human 56931 Genes GS241744: [MeSH] DNA, Single-Stranded : D004277 Figure Label: DNA, Single-Stranded Species: Homo sapiens  Data Points: 56931  Description: A single chain of deoxyribonucleotides that occurs in some bacteria and viruses. It usually exists as a covalently closed circle. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier III Rat 458 Genes GS223490: Polydactyly-luxate syndrome (PLS) morphotypes QTL 4 (Plsm4 Published QTL Chr 11) Figure Label: QTL-Plsm4-Rat-Chr 11 Species: Rattus norvegicus  Data Points: 458  Description: QTL Associated with Limb morphology. On Chromosome 11 with a LOD score= , p-value =3.00E-04. From a(n) intercross of SHR/OlaxBN-lx/Cub Available to: Everyone (Tier III)
	Tier II Human 67130 Genes GS241889: [MeSH] Molecular Structure : D015394 Figure Label: Molecular Structure Species: Homo sapiens  Data Points: 67130  Description: The location of the atoms, groups or ions relative to one another in a molecule, as well as the number, type and location of covalent bonds. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human GO 6256 Genes GS210000: GO:0044446 intracellular organelle part Figure Label: GO:0044446 Species: Homo sapiens  Data Points: 6256  Description: "A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane." [GOC:jl] Available to: Everyone (Tier I)
	Tier I Mouse 200 Genes GS227751: MSigDB Geneset - GSE15324_NAIVE_VS_ACTIVATED_CD8_TCELL_DN Figure Label: GSE15324_NAIVE_VS_ACTIVATED_CD8_TCELL_DN Species: Mus musculus  Data Points: 200  Description: GSE15324_NAIVE_VS_ACTIVATED_CD8_TCELL_DN Genes down-regulated in comparison of naive CD8 T cells versus activated CD8 T cells. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Human CTD 185 Genes GS125836: coumarin interacting genes (MeSH:C030123) in CTD Figure Label: C030123 [CTD] Species: Homo sapiens  Data Points: 185  Description: Genes that interact with the MeSH term 'coumarin' (C030123). Incorporates data from 47 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	Tier I Human GO 9088 Genes GS194133: GO:0005737 cytoplasm Figure Label: GO:0005737 Species: Homo sapiens  Data Points: 9088  Description: "All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures." [ISBN:0198547684] Available to: Everyone (Tier I)
	Tier I Mouse GO 23359 Genes GS177356: GO:0003674 molecular_function Figure Label: GO:0003674 Species: Mus musculus  Data Points: 23359  Description: "Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions." [GOC:go_curators] Available to: Everyone (Tier I)
	Tier II Human 59585 Genes GS234621: [MeSH] Chemical Actions and Uses : D020164 Figure Label: Chemical Actions and Uses Species: Homo sapiens  Data Points: 59585  Description: A group of pharmacologic activities, effects on living systems and the environment, and modes of employment of drugs and chemicals. They are broken into actions, which describe their effects, and uses, which describe how they are employed. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 62071 Genes GS235061: [MeSH] Amino Acids, Peptides, and Proteins : D000602 Figure Label: Amino Acids, Peptides, and Proteins Species: Homo sapiens  Data Points: 62071  Description: Amino acids and chains of amino acids connected by peptide linkages. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human GO 10561 Genes GS203590: GO:0043229 intracellular organelle Figure Label: GO:0043229 Species: Homo sapiens  Data Points: 10561  Description: "Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	Tier I Mouse 475 Genes GS136288: modifier of polycystic kidney disease progression 2 (Mopkd2, Published QTL Chr 16) Figure Label: QTL-Mopkd2-Mouse-Chr 16 Species: Mus musculus  Data Points: 475  Description: QTL associated with modifier of polycystic kidney disease progression 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (21827637) Available to: Everyone (Tier I)
	Tier II Human 73218 Genes GS245795: [MeSH] Genes : D005796 Figure Label: Genes Species: Homo sapiens  Data Points: 73218  Description: A category of nucleic acid sequences that function as units of heredity and which code for the basic instructions for the development, reproduction, and maintenance of organisms. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Mouse 339 Genes GS136314: non-HDL QTL 10 (Nhdlq10, Published QTL Chr 16) Figure Label: QTL-Nhdlq10-Mouse-Chr 16 Species: Mus musculus  Data Points: 339  Description: QTL associated with non-HDL QTL 10. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (7445973) Available to: Everyone (Tier I)
	Tier I Mouse 315 Genes GS135807: autoimmune epididymitis resistance 1 (Epd1, Published QTL Chr 16) Figure Label: QTL-Epd1-Mouse-Chr 16 Species: Mus musculus  Data Points: 315  Description: QTL associated with autoimmune epididymitis resistance 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (5706639) Available to: Everyone (Tier I)
	Tier I Mouse 469 Genes GS136576: radiation-induced apoptosis 1 (Rapop1, Published QTL Chr 16) Figure Label: QTL-Rapop1-Mouse-Chr 16 Species: Mus musculus  Data Points: 469  Description: QTL associated with radiation-induced apoptosis 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (31984189) Available to: Everyone (Tier I)
	Tier I Mouse 415 Genes GS135361: B.burgdorferi-associated arthritis 19 (Bbaa19, Published QTL Chr 16) Figure Label: QTL-Bbaa19-Mouse-Chr 16 Species: Mus musculus  Data Points: 415  Description: QTL associated with B.burgdorferi-associated arthritis 19. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (13249057) Available to: Everyone (Tier I)
	Tier II Human 47536 Genes GS236298: [MeSH] Gene Expression : D015870 Figure Label: Gene Expression Species: Homo sapiens  Data Points: 47536  Description: The phenotypic manifestation of a gene or genes by the processes of GENETIC TRANSCRIPTION and GENETIC TRANSLATION. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 33265 Genes GS237679: [MeSH] Genetic Code : D005815 Figure Label: Genetic Code Species: Homo sapiens  Data Points: 33265  Description: The meaning ascribed to the BASE SEQUENCE with respect to how it is translated into AMINO ACID SEQUENCE. The start, stop, and order of amino acids of a protein is specified by consecutive triplets of nucleotides called codons (CODON). Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 194 Genes GS229857: MSigDB Geneset - GSE3982_EFF_MEMORY_VS_CENT_MEMORY_CD4_TCELL_UP Figure Label: GSE3982_EFF_MEMORY_VS_CENT_MEMORY_CD4_TCELL_UP Species: Homo sapiens  Data Points: 194  Description: GSE3982_EFF_MEMORY_VS_CENT_MEMORY_CD4_TCELL_UP Genes up-regulated in comparison of effective memory CD4 [GeneID=920] T cells versus central memory CD4 [GeneID=920] T cells. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Human 258 Genes GS230451: MSigDB Geneset - V$TTF1_Q6 Figure Label: V$TTF1_Q6 Species: Homo sapiens  Data Points: 258  Description: V$TTF1_Q6 Genes with promoter regions [-2kb,2kb] around transcription start site containing the motif NNNNCAAGNRNN which matches annotation for TITF1: thyroid transcription factor 1 c3 - Motif genesets based on conserved cis-regulatory motifs from a comparative analysis of the human, mouse, rat, and dog genomes. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 35136 Genes GS240987: [MeSH] Metabolism : D008660 Figure Label: Metabolism Species: Homo sapiens  Data Points: 35136  Description: The chemical reactions that occur within the cells, tissues, or an organism. These processes include both the biosynthesis (ANABOLISM) and the breakdown (CATABOLISM) of organic materials utilized by the living organism. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 198 Genes GS228575: MSigDB Geneset - GSE17974_0H_VS_6H_IN_VITRO_ACT_CD4_TCELL_DN Figure Label: GSE17974_0H_VS_6H_IN_VITRO_ACT_CD4_TCELL_DN Species: Homo sapiens  Data Points: 198  Description: GSE17974_0H_VS_6H_IN_VITRO_ACT_CD4_TCELL_DN Genes down-regulated in comparison of untreated CD4 [GeneID=920] T cells at 0 h versus the untreated cells at 6 h. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 36279 Genes GS241850: [MeSH] Genetic Variation : D014644 Figure Label: Genetic Variation Species: Homo sapiens  Data Points: 36279  Description: Genotypic differences observed among individuals in a population. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Mouse GO 1149 Genes GS179957: GO:0005783 endoplasmic reticulum Figure Label: GO:0005783 Species: Mus musculus  Data Points: 1149  Description: "The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached)." [ISBN:0198506732] Available to: Everyone (Tier I)
	Tier I Mouse 482 Genes GS135961: HDL QTL 28 (Hdlq28, Published QTL Chr 16) Figure Label: QTL-Hdlq28-Mouse-Chr 16 Species: Mus musculus  Data Points: 482  Description: QTL associated with HDL QTL 28. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (29406628) Available to: Everyone (Tier I)
	Tier I Mouse 315 Genes GS136175: locomotor activity 2 (Loca2, Published QTL Chr 16) Figure Label: QTL-Loca2-Mouse-Chr 16 Species: Mus musculus  Data Points: 315  Description: QTL associated with locomotor activity 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (5682589) Available to: Everyone (Tier I)
	Tier I Human 199 Genes GS230046: MSigDB Geneset - GSE13411_NAIVE_VS_MEMORY_BCELL_DN Figure Label: GSE13411_NAIVE_VS_MEMORY_BCELL_DN Species: Homo sapiens  Data Points: 199  Description: GSE13411_NAIVE_VS_MEMORY_BCELL_DN Genes down-regulated in comparison of naive B cells versus memory B cells. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 27720 Genes GS235272: [MeSH] Membrane Proteins : D008565 Figure Label: Membrane Proteins Species: Homo sapiens  Data Points: 27720  Description: Proteins which are found in membranes including cellular and intracellular membranes. They consist of two types, peripheral and integral proteins. They include most membrane-associated enzymes, antigenic proteins, transport proteins, and drug, hormone, and lectin receptors. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human GO 2665 Genes GS205543: GO:0070013 intracellular organelle lumen Figure Label: GO:0070013 Species: Homo sapiens  Data Points: 2665  Description: "An organelle lumen that is part of an intracellular organelle." [GOC:mah] Available to: Everyone (Tier I)
	Tier II Human 13521 Genes GS245544: [MeSH] Conserved Sequence : D017124 Figure Label: Conserved Sequence Species: Homo sapiens  Data Points: 13521  Description: A sequence of amino acids in a polypeptide or of nucleotides in DNA or RNA that is similar across multiple species. A known set of conserved sequences is represented by a CONSENSUS SEQUENCE. AMINO ACID MOTIFS are often composed of conserved sequences. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Mouse 431 Genes GS136591: radiation induced thymic lymphoma susceptibility (Ritls, Published QTL Chr 16) Figure Label: QTL-Ritls-Mouse-Chr 16 Species: Mus musculus  Data Points: 431  Description: QTL associated with radiation induced thymic lymphoma susceptibility. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (15913145) Available to: Everyone (Tier I)
	Tier I Mouse 199 Genes GS229402: MSigDB Geneset - GSE17721_CPG_VS_GARDIQUIMOD_2H_BMDM_UP Figure Label: GSE17721_CPG_VS_GARDIQUIMOD_2H_BMDM_UP Species: Mus musculus  Data Points: 199  Description: GSE17721_CPG_VS_GARDIQUIMOD_2H_BMDM_UP Genes up-regulated in comparison of dendritic cells (DC) stimulated with CpG DNA (TLR9 agonist) at 2 h versus DC cells stimulated with Gardiquimod (TLR7 agonist) at 2 h. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse 476 Genes GS136653: skeletal size (tail length) 7 (Skl7, Published QTL Chr 16) Figure Label: QTL-Skl7-Mouse-Chr 16 Species: Mus musculus  Data Points: 476  Description: QTL associated with skeletal size (tail length) 7. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (22956575) Available to: Everyone (Tier I)
	Tier I Human 200 Genes GS227364: MSigDB Geneset - GSE7460_FOXP3_MUT_VS_WT_ACT_WITH_TGFB_TCONV_UP Figure Label: GSE7460_FOXP3_MUT_VS_WT_ACT_WITH_TGFB_TCONV_UP Species: Homo sapiens  Data Points: 200  Description: GSE7460_FOXP3_MUT_VS_WT_ACT_WITH_TGFB_TCONV_UP Genes up-regulated in comparsion of sfActCD4TGF versus ActCD4TGF (see Fig. 1 in the paper for details). c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse GO 8145 Genes GS190714: GO:0016020 membrane Figure Label: GO:0016020 Species: Mus musculus  Data Points: 8145  Description: "Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins." [GOC:mah, ISBN:0815316194] Available to: Everyone (Tier I)
	Tier II Human 8558 Genes GS241064: [MeSH] Ubiquitins : D014452 Figure Label: Ubiquitins Species: Homo sapiens  Data Points: 8558  Description: A family of proteins that are structurally-related to Ubiquitin. Ubiquitins and ubiquitin-like proteins participate in diverse cellular functions, such as protein degradation and HEAT-SHOCK RESPONSE, by conjugation to other proteins. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 258 Genes GS230577: MSigDB Geneset - RACCACAR_V$AML_Q6 Figure Label: RACCACAR_V$AML_Q6 Species: Homo sapiens  Data Points: 258  Description: RACCACAR_V$AML_Q6 Genes with promoter regions [-2kb,2kb] around transcription start site containing the motif RACCACAR which matches annotation for RUNX1: runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) c3 - Motif genesets based on conserved cis-regulatory motifs from a comparative analysis of the human, mouse, rat, and dog genomes. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 9287 Genes GS243335: [MeSH] Chromosomes, Mammalian : D033481 Figure Label: Chromosomes, Mammalian Species: Homo sapiens  Data Points: 9287  Description: Complex nucleoprotein structures which contain the genomic DNA and are part of the CELL NUCLEUS of MAMMALS. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 256 Genes GS232395: PC Geneset - "RACCACAR_V$AML_Q6" pathway genes Figure Label: RACCACAR_V$AML_Q6 Species: Homo sapiens  Data Points: 256  Description: Pathway Commons (PC) Geneset. This geneset contains genes that participate in the "RACCACAR_V$AML_Q6" pathway. This set was automatically constructed using the PC API. The original source of this geneset is TRANSFAC. gene2pc v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Human GO 7717 Genes GS207616: GO:0016020 membrane Figure Label: GO:0016020 Species: Homo sapiens  Data Points: 7717  Description: "Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins." [GOC:mah, ISBN:0815316194] Available to: Everyone (Tier I)
	Tier III Mouse 5790 Genes GS213077: Genes with suggestive difference in (PWD) vs (PB6F1 + B6PF1 + B6) comparison Figure Label: PWD specific Species: Mus musculus  Data Points: 5790  Description: Genes with suggestive difference (nonadjusted P-value < 0.05) in expression in prepubertal testes for (PWD) vs (PB6F1 + B6PF1 + B6) comparison Available to: Everyone (Tier III)
	Tier I Mouse 296 Genes GS136457: postnatal body weight growth 19 (Pbwg19, Published QTL Chr 16) Figure Label: QTL-Pbwg19-Mouse-Chr 16 Species: Mus musculus  Data Points: 296  Description: QTL associated with postnatal body weight growth 19. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (3962915) Available to: Everyone (Tier I)
	Tier I Human 280 Genes GS227743: MSigDB Geneset - chr22q11 Figure Label: chr22q11 Species: Homo sapiens  Data Points: 280  Description: chr22q11 Genes in cytogenetic band chr22q11 c1 - Positional genesets for each human chromosome and cytogenetic band. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 50108 Genes GS239769: [MeSH] Gene Library : D015723 Figure Label: Gene Library Species: Homo sapiens  Data Points: 50108  Description: A large collection of DNA fragments cloned (CLONING, MOLECULAR) from a given organism, tissue, organ, or cell type. It may contain complete genomic sequences (GENOMIC LIBRARY) or complementary DNA sequences, the latter being formed from messenger RNA and lacking intron sequences. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 26319 Genes GS238348: [MeSH] Cell Line : D002460 Figure Label: Cell Line Species: Homo sapiens  Data Points: 26319  Description: Established cell cultures that have the potential to propagate indefinitely. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 8327 Genes GS244452: [MeSH] Organ Specificity : D009928 Figure Label: Organ Specificity Species: Homo sapiens  Data Points: 8327  Description: Characteristic restricted to a particular organ of the body, such as a cell type, metabolic response or expression of a particular protein or antigen. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Mouse 199 Genes GS229014: MSigDB Geneset - GSE14350_IL2RB_KO_VS_WT_TEFF_DN Figure Label: GSE14350_IL2RB_KO_VS_WT_TEFF_DN Species: Mus musculus  Data Points: 199  Description: GSE14350_IL2RB_KO_VS_WT_TEFF_DN Genes down-regulated in comparison of effector T cells from IL2RB [GeneID=3560] defficient mice versus effector T cells from wild type animals. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 58105 Genes GS242107: [MeSH] Chemical Processes : D055599 Figure Label: Chemical Processes Species: Homo sapiens  Data Points: 58105  Description: The reactions and interactions of atoms and molecules, the changes in their structure and composition, and associated energy changes. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 32929 Genes GS243578: [MeSH] Reading Frames : D016364 Figure Label: Reading Frames Species: Homo sapiens  Data Points: 32929  Description: The three possible sequences of CODONS by which GENETIC TRANSLATION may occur from one nucleotide sequence. A segment of mRNA 5'AUCCGA3' could be translated as 5'AUC.. or 5'UCC.. or 5'CCG.., depending on the location of the START CODON. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 262 Genes GS227685: MSigDB Geneset - V$AML_Q6 Figure Label: V$AML_Q6 Species: Homo sapiens  Data Points: 262  Description: V$AML_Q6 Genes with promoter regions [-2kb,2kb] around transcription start site containing the motif NNGKNTGTGGTTWNC which matches annotation for RUNX1: runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) c3 - Motif genesets based on conserved cis-regulatory motifs from a comparative analysis of the human, mouse, rat, and dog genomes. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Human 200 Genes GS229425: MSigDB Geneset - GSE3982_NEUTROPHIL_VS_TH1_DN Figure Label: GSE3982_NEUTROPHIL_VS_TH1_DN Species: Homo sapiens  Data Points: 200  Description: GSE3982_NEUTROPHIL_VS_TH1_DN Genes down-regulated in comparison of neutrophils versus Th1 cells. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Human 196 Genes GS227350: MSigDB Geneset - GSE29617_CTRL_VS_TIV_FLU_VACCINE_PBMC_2008_DN Figure Label: GSE29617_CTRL_VS_TIV_FLU_VACCINE_PBMC_2008_DN Species: Homo sapiens  Data Points: 196  Description: GSE29617_CTRL_VS_TIV_FLU_VACCINE_PBMC_2008_DN Genes down-regulated in comparison of peripheral blood mononuclear cells (PBMC) from TIV influenza vaccinee before vaccination versus that after the vaccination. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier III Rat 838 Genes GS224302: Insulin dependent diabetes mellitus QTL 17 (Iddm17 Published QTL Chr 11) Figure Label: QTL-Iddm17-Rat-Chr 11 Species: Rattus norvegicus  Data Points: 838  Description: QTL Associated with Glucose level. On Chromosome 11 with a LOD score= , p-value =0.001. From a(n) backcross of LETOxPKDP Available to: Everyone (Tier III)
	Tier I Human 725 Genes GS230591: MSigDB Geneset - GTGCCTT,MIR-506 Figure Label: GTGCCTT,MIR-506 Species: Homo sapiens  Data Points: 725  Description: GTGCCTT,MIR-506 Targets of MicroRNA GTGCCTT,MIR-506 c3 - Motif genesets based on conserved cis-regulatory motifs from a comparative analysis of the human, mouse, rat, and dog genomes. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse 199 Genes GS228047: MSigDB Geneset - GSE11924_TH1_VS_TH2_CD4_TCELL_DN Figure Label: GSE11924_TH1_VS_TH2_CD4_TCELL_DN Species: Mus musculus  Data Points: 199  Description: GSE11924_TH1_VS_TH2_CD4_TCELL_DN Genes down-regulated in comparison of Th1 cells versus Th17 cells. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 83226 Genes GS241072: [MeSH] Genetic Phenomena : D055614 Figure Label: Genetic Phenomena Species: Homo sapiens  Data Points: 83226  Description: The processes, properties and biological objects that are involved in maintaining, expressing, and transmitting from one organism to another, genetically encoded traits. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 904 Genes GS237234: [MeSH] Chromosomes, Human, 21-22 and Y : D002904 Figure Label: Chromosomes, Human, 21-22 and Y Species: Homo sapiens  Data Points: 904  Description: The short, acrocentric human chromosomes, called group G in the human chromosome classification. This group consists of chromosome pairs 21 and 22 and the Y chromosome. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 60093 Genes GS243325: [MeSH] Base Sequence : D001483 Figure Label: Base Sequence Species: Homo sapiens  Data Points: 60093  Description: The sequence of PURINES and PYRIMIDINES in nucleic acids and polynucleotides. It is also called nucleotide sequence. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Mouse 486 Genes GS135934: high density lipoprotein (HDL) level 3 (Hdl3, Published QTL Chr 16) Figure Label: QTL-Hdl3-Mouse-Chr 16 Species: Mus musculus  Data Points: 486  Description: QTL associated with high density lipoprotein (HDL) level 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (29030158) Available to: Everyone (Tier I)
	Tier I Mouse 199 Genes GS227307: MSigDB Geneset - GSE14350_TREG_VS_TEFF_DN Figure Label: GSE14350_TREG_VS_TEFF_DN Species: Mus musculus  Data Points: 199  Description: GSE14350_TREG_VS_TEFF_DN Genes down-regulated in comparison of regulatory T cell (Treg) versus effector T cells. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse 200 Genes GS227572: MSigDB Geneset - GSE17721_0.5H_VS_4H_CPG_BMDM_UP Figure Label: GSE17721_0.5H_VS_4H_CPG_BMDM_UP Species: Mus musculus  Data Points: 200  Description: GSE17721_0.5H_VS_4H_CPG_BMDM_UP Genes up-regulated in comparison of dendritic cells (DC) stimulated with CpG DNA (TLR9 agonist) at 0.5 h versus those stimulated with CpG DNA (TLR9 agonist) at 4 h. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 14819 Genes GS244426: [MeSH] Tumor Cells, Cultured : D014407 Figure Label: Tumor Cells, Cultured Species: Homo sapiens  Data Points: 14819  Description: Cells grown in vitro from neoplastic tissue. If they can be established as a TUMOR CELL LINE, they can be propagated in cell culture indefinitely. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human GO 915 Genes GS197025: GO:0044432 endoplasmic reticulum part Figure Label: GO:0044432 Species: Homo sapiens  Data Points: 915  Description: "Any constituent part of the endoplasmic reticulum, the irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae." [GOC:jl] Available to: Everyone (Tier I)
	Tier I Mouse 476 Genes GS136684: skull morphology 23 (Skull23, Published QTL Chr 16) Figure Label: QTL-Skull23-Mouse-Chr 16 Species: Mus musculus  Data Points: 476  Description: QTL associated with skull morphology 23. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (22956575) Available to: Everyone (Tier I)
	Mouse 122 Genes GS213213: Collaborative Cross Cecum Microflora Parabiclique2 CC03.9t.8g.8g Figure Label: CC_Microflora_PB2_9t8g8g Species: Mus musculus  Data Points: 122  Description: Parabiclique of genes co-expressed with microflora CC03 (Clostridiales Ruminococcaceae Oscillibacter), C142, (Clostridiales Incertae Sedis XII Guggenheimella), C158 (Bacteroidales Rikenellaceae Rikenella), C2801 (Bacteroidales Rikenellaceae Rikenella), C311 (Bacteroidales Rikenellaceae Rikenella) Available to: Everyone (Tier V)
	Tier I Mouse GO 11124 Genes GS184447: GO:0044424 intracellular part Figure Label: GO:0044424 Species: Mus musculus  Data Points: 11124  Description: "Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm." [GOC:jl] Available to: Everyone (Tier I)
	Tier II Human 73736 Genes GS238575: [MeSH] Nucleic Acids : D009696 Figure Label: Nucleic Acids Species: Homo sapiens  Data Points: 73736  Description: High molecular weight polymers containing a mixture of purine and pyrimidine nucleotides chained together by ribose or deoxyribose linkages. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Mouse 133 Genes GS227447: MSigDB Geneset - RB_P130_DN.V1_UP Figure Label: RB_P130_DN.V1_UP Species: Mus musculus  Data Points: 133  Description: RB_P130_DN.V1_UP Genes up-regulated in primary keratinocytes from RB1 and RBL2 [GeneID=5925] [GeneID=5934] skin specific knockout mice. c6 - Genesets containing oncogenic signatures defined directly from microarray gene expression data from cancer gene perturbations. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse 200 Genes GS228813: MSigDB Geneset - GSE20715_0H_VS_48H_OZONE_TLR4_KO_LUNG_DN Figure Label: GSE20715_0H_VS_48H_OZONE_TLR4_KO_LUNG_DN Species: Mus musculus  Data Points: 200  Description: GSE20715_0H_VS_48H_OZONE_TLR4_KO_LUNG_DN Genes down-regulated in comparison of lung tissue from wild type mice subjected to ozone for 0 h versus that from TLR4 [GeneID=7099] deficient mice subjected to ozone for 48 h. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 4336 Genes GS234137: [MeSH] HEK293 Cells : D057809 Figure Label: HEK293 Cells Species: Homo sapiens  Data Points: 4336  Description: A cell line generated from human embryonic kidney cells that were tranformed with human adenovirus type 5. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 264 Genes GS229179: MSigDB Geneset - V$OSF2_Q6 Figure Label: V$OSF2_Q6 Species: Homo sapiens  Data Points: 264  Description: V$OSF2_Q6 Genes with promoter regions [-2kb,2kb] around transcription start site containing the motif ACCACANM which matches annotation for RUNX2: runt-related transcription factor 2 c3 - Motif genesets based on conserved cis-regulatory motifs from a comparative analysis of the human, mouse, rat, and dog genomes. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 58261 Genes GS239502: [MeSH] Nucleic Acid Probes : D015341 Figure Label: Nucleic Acid Probes Species: Homo sapiens  Data Points: 58261  Description: Nucleic acid which complements a specific mRNA or DNA molecule, or fragment thereof; used for hybridization studies in order to identify microorganisms and for genetic studies. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Mouse GO 9717 Genes GS186740: GO:0043229 intracellular organelle Figure Label: GO:0043229 Species: Mus musculus  Data Points: 9717  Description: "Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	Tier I Human CTD 4391 Genes GS123768: Cyclosporine interacting genes (MeSH:D016572) in CTD Figure Label: D016572 [CTD] Species: Homo sapiens  Data Points: 4391  Description: Genes that interact with the MeSH term 'Cyclosporine' (D016572). Incorporates data from 81 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	Tier I Mouse GO 23849 Genes GS180164: GO:0008150 biological_process Figure Label: GO:0008150 Species: Mus musculus  Data Points: 23849  Description: "Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end." [GOC:go_curators, GOC:isa_complete] Available to: Everyone (Tier I)
	Tier II Human 30111 Genes GS244835: [MeSH] Chromosomes : D002875 Figure Label: Chromosomes Species: Homo sapiens  Data Points: 30111  Description: In a prokaryotic cell or in the nucleus of a eukaryotic cell, a structure consisting of or containing DNA which carries the genetic information essential to the cell. (From Singleton & Sainsbury, Dictionary of Microbiology and Molecular Biology, 2d ed) Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 193 Genes GS229411: MSigDB Geneset - GSE29617_CTRL_VS_DAY7_TIV_FLU_VACCINE_PBMC_2008_DN Figure Label: GSE29617_CTRL_VS_DAY7_TIV_FLU_VACCINE_PBMC_2008_DN Species: Homo sapiens  Data Points: 193  Description: GSE29617_CTRL_VS_DAY7_TIV_FLU_VACCINE_PBMC_2008_DN Genes down-regulated in comparison of peripheral blood mononuclear cells (PBMC) from TIV influenza vaccinee pre-vaccination versus those at day 7 post-vaccination. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 52165 Genes GS242059: [MeSH] Cells : D002477 Figure Label: Cells Species: Homo sapiens  Data Points: 52165  Description: The fundamental, structural, and functional units or subunits of living organisms. They are composed of CYTOPLASM containing various ORGANELLES and a CELL MEMBRANE boundary. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 255 Genes GS232324: PC Geneset - "V$AML_Q6" pathway genes Figure Label: V$AML_Q6 Species: Homo sapiens  Data Points: 255  Description: Pathway Commons (PC) Geneset. This geneset contains genes that participate in the "V$AML_Q6" pathway. This set was automatically constructed using the PC API. The original source of this geneset is TRANSFAC. gene2pc v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Human 195 Genes GS228888: MSigDB Geneset - GSE13411_PLASMA_CELL_VS_MEMORY_BCELL_UP Figure Label: GSE13411_PLASMA_CELL_VS_MEMORY_BCELL_UP Species: Homo sapiens  Data Points: 195  Description: GSE13411_PLASMA_CELL_VS_MEMORY_BCELL_UP Genes up-regulated in comparison of plasma cells versus memory B cells. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 73996 Genes GS244482: [MeSH] Nucleic Acids, Nucleotides, and Nucleosides : D009706 Figure Label: Nucleic Acids, Nucleotides, and Nucleosides Species: Homo sapiens  Data Points: 73996  Description: Complex compounds of high molecular weight occurring in living cells. These are basically of two types, ribonucleic (RNA) and deoxyribonucleic (DNA) acids, both of which consist of nucleotides (nucleoside phosphates linked together by phosphate bridges). Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human GO 14537 Genes GS208012: GO:0044464 cell part Figure Label: GO:0044464 Species: Homo sapiens  Data Points: 14537  Description: "Any constituent part of a cell, the basic structural and functional unit of all organisms." [GOC:jl] Available to: Everyone (Tier I)
	Tier II Mouse 124 Genes GS35857: Striatum Gene expression correlates of Cocaine CPP - difference in percent test time spent relative to preconditioning in Females & Males BXD Figure Label: STR COCA_TIME_PCT_CHANGE F&M BXD M430v2 RMA Species: Mus musculus  Data Points: 124  Description: Striatum Gene Expression Correlates for COCA_TIME_PCT_CHANGE measured in BXD RI Females & Males obtained using GeneNetwork Striatum M430V2 (Apr05) RMA. The COCA_TIME_PCT_CHANGE measures Cocaine CPP - difference in percent test time spent relative to preconditioning under the domain Cocaine. The correlates were thresholded at a p-value of less than 0.001. Available to: Everyone (Tier II)
	Tier I Human GO 16864 Genes GS210212: GO:0005575 cellular_component Figure Label: GO:0005575 Species: Homo sapiens  Data Points: 16864  Description: "The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together." [GOC:go_curators] Available to: Everyone (Tier I)
	Tier II Human 58105 Genes GS235797: [MeSH] DNA Probes : D015342 Figure Label: DNA Probes Species: Homo sapiens  Data Points: 58105  Description: Species- or subspecies-specific DNA (including COMPLEMENTARY DNA; conserved genes, whole chromosomes, or whole genomes) used in hybridization studies in order to identify microorganisms, to measure DNA-DNA homologies, to group subspecies, etc. The DNA probe hybridizes with a specific mRNA, if present. Conventional techniques used for testing for the hybridization product include dot blot assays, Southern blot assays, and DNA:RNA hybrid-specific antibody tests. Conventional labels for the DNA probe include the radioisotope labels 32P and 125I and the chemical label biotin. The use of DNA probes provides a specific, sensitive, rapid, and inexpensive replacement for cell culture techniques for diagnosing infections. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Mouse 335 Genes GS136334: nicotine induced locomotor activity 10 (Nilac10, Published QTL Chr 16) Figure Label: QTL-Nilac10-Mouse-Chr 16 Species: Mus musculus  Data Points: 335  Description: QTL associated with nicotine induced locomotor activity 10. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (7319135) Available to: Everyone (Tier I)
	Tier II Human 41481 Genes GS234192: [MeSH] Gene Expression Regulation : D005786 Figure Label: Gene Expression Regulation Species: Homo sapiens  Data Points: 41481  Description: Any of the processes by which nuclear, cytoplasmic, or intercellular factors influence the differential control (induction or repression) of gene action at the level of transcription or translation. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 58023 Genes GS235242: [MeSH] Biochemical Processes : D055438 Figure Label: Biochemical Processes Species: Homo sapiens  Data Points: 58023  Description: Chemical reactions or functions, enzymatic activities, and metabolic pathways of living things. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 52588 Genes GS245685: [MeSH] RNA : D012313 Figure Label: RNA Species: Homo sapiens  Data Points: 52588  Description: A polynucleotide consisting essentially of chains with a repeating backbone of phosphate and ribose units to which nitrogenous bases are attached. RNA is unique among biological macromolecules in that it can encode genetic information, serve as an abundant structural component of cells, and also possesses catalytic activity. (Rieger et al., Glossary of Genetics: Classical and Molecular, 5th ed) Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human CTD 1556 Genes GS125506: Valproic Acid interacting genes (MeSH:D014635) in CTD Figure Label: D014635 [CTD] Species: Homo sapiens  Data Points: 1556  Description: Genes that interact with the MeSH term 'Valproic Acid' (D014635). Incorporates data from 70 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	Tier I Mouse 199 Genes GS230635: MSigDB Geneset - GSE9037_WT_VS_IRAK4_KO_BMDM_DN Figure Label: GSE9037_WT_VS_IRAK4_KO_BMDM_DN Species: Mus musculus  Data Points: 199  Description: GSE9037_WT_VS_IRAK4_KO_BMDM_DN Genes down-regulated in comparison of untreated wild type macrophages at 4 h versus those from IRAK4 [GeneID=51135] deficient mice at 4 h. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Rat DRG 3886 Genes provisional GS86945: Table S4: CORTEX MGC MICROARRAY [DRG] Figure Label: Chronic cocaine - Cocaine-paired (conditioned place preference) vs. Control (saline or cocaine-non-paired) Species: Rattus norvegicus  Data Points: 3886  Description: Chronic cocaine - Cocaine-paired (conditioned place preference) vs. Control (saline or cocaine-non-paired) DNA microarray All genes on microarray presented After the pre-conditioning phase where animals were allowed access to either compartment for 15 minutes for 4 consecutive days, the conditioning phase for the cocaine-paired groups and cocaine non-paired groups began, consisting of eight subsequent daily sessions. For both groups, cocaine (10 mg / kg) or saline injections were administered on alternate days. For the cocaine-paired groups, rats were immediately placed in one of the two compartments for 30 min with the door in place restricting a z transformation followed by z test and anova followed by Student-Newman-Keuls' post hoc test. Gene expression profile was assessed 24 h after the last conditioning session that corresponded to 48 h after last cocaine exposure, when drug has been eliminated from the body and transient transcriptional changes are likely to be minimal. Therefore, changes in gene expression at this time-point are likely to reflect longer lasting adaptations that may account for maintenance of cocaine-induced memories. The complete lists of the normalized gene expression values for the frontal cortex of saline-treated, cocaine non-paired and cocaine-paired groups are presented. Differences in the expression of 39 transcripts in the frontal cortex were related to the conditioned place preference paradigm. These include increases in the level of 22 genes and decreases in 17 genes. (NIF Table ID 130.4 [84.5]) Available to: Everyone (Tier I)
	Tier I Rat DRG 3886 Genes provisional GS86769: Table S2: HIPPOCAMPUS MGC MICROARRAY [DRG] Figure Label: Chronic cocaine - Cocaine-paired (conditioned place preference) vs. Control (saline or cocaine-non-paired) Species: Rattus norvegicus  Data Points: 3886  Description: Chronic cocaine - Cocaine-paired (conditioned place preference) vs. Control (saline or cocaine-non-paired) DNA microarray All genes on microarray presented After the pre-conditioning phase where animals were allowed access to either compartment for 15 minutes for 4 consecutive days, the conditioning phase for the cocaine-paired groups and cocaine non-paired groups began, consisting of eight subsequent daily sessions. For both groups, cocaine (10 mg / kg) or saline injections were administered on alternate days. For the cocaine-paired groups, rats were immediately placed in one of the two compartments for 30 min with the door in place restricting a z transformation followed by z test and anova followed by Student-Newman-Keuls' post hoc test. Gene expression profile was assessed 24 h after the last conditioning session that corresponded to 48 h after last cocaine exposure, when drug has been eliminated from the body and transient transcriptional changes are likely to be minimal. Therefore, changes in gene expression at this time-point are likely to reflect longer lasting adaptations that may account for maintenance of cocaine-induced memories. The complete lists of the normalized gene expression values for the hippocampus of saline-treated, cocaine non-paired and cocaine-paired groups are presented. Analyses revealed that 214 transcripts were differentially regulated in the hippocampus of cocaine-paired rats vs. non-paired and saline-treated controls. Cocaine-induced conditioned place preference caused significant increases in the expression of 151 genes and caused decreases in the expression of 63 genes. (NIF Table ID 130.2 [84]) Available to: Everyone (Tier I)
	Tier II Human 13987 Genes GS237817: [MeSH] Cell Line, Tumor : D045744 Figure Label: Cell Line, Tumor Species: Homo sapiens  Data Points: 13987  Description: A cell line derived from cultured tumor cells. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Mouse 200 Genes GS229371: MSigDB Geneset - GSE39820_TGFBETA3_IL6_VS_TGFBETA3_IL6_IL23A_TREATED_CD4_TCELL_DN Figure Label: GSE39820_TGFBETA3_IL6_VS_TGFBETA3_IL6_IL23A_TREATED_CD4_TCELL_DN Species: Mus musculus  Data Points: 200  Description: GSE39820_TGFBETA3_IL6_VS_TGFBETA3_IL6_IL23A_TREATED_CD4_TCELL_DN Genes down-regulated in comparison of CD4 [GeneID=920] T cells treated with TGFB3 [GeneID=7043] and IL6 [GeneID=3569] versus those treated with TGF3B [GeneID=7043], IL6 [GeneID=3569] and IL23A [GeneID=51561]. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse 200 Genes GS230662: MSigDB Geneset - GSE17721_0.5H_VS_24H_CPG_BMDM_UP Figure Label: GSE17721_0.5H_VS_24H_CPG_BMDM_UP Species: Mus musculus  Data Points: 200  Description: GSE17721_0.5H_VS_24H_CPG_BMDM_UP Genes up-regulated in comparison of dendritic cells (DC) stimulated with CpG DNA (TLR9 agonist) at 0.5 h versus those stimulated with CpG DNA (TLR9 agonist) at 24 h. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Human 123 Genes GS228926: MSigDB Geneset - V$NKX25_01 Figure Label: V$NKX25_01 Species: Homo sapiens  Data Points: 123  Description: V$NKX25_01 Genes with promoter regions [-2kb,2kb] around transcription start site containing the motif TYAAGTG which matches annotation for NKX2-5: NK2 transcription factor related, locus 5 (Drosophila) c3 - Motif genesets based on conserved cis-regulatory motifs from a comparative analysis of the human, mouse, rat, and dog genomes. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 28877 Genes GS238592: [MeSH] Cells, Cultured : D002478 Figure Label: Cells, Cultured Species: Homo sapiens  Data Points: 28877  Description: Cells propagated in vitro in special media conducive to their growth. Cultured cells are used to study developmental, morphologic, metabolic, physiologic, and genetic processes, among others. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Mouse 198 Genes GS227326: MSigDB Geneset - GSE17721_CTRL_VS_CPG_0.5H_BMDM_DN Figure Label: GSE17721_CTRL_VS_CPG_0.5H_BMDM_DN Species: Mus musculus  Data Points: 198  Description: GSE17721_CTRL_VS_CPG_0.5H_BMDM_DN Genes down-regulated in comparison of control dendritic cells (DC) at 0 h versus those stimulated with CpG DNA (TLR9 agonist) at 0.5 h. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse GO 13187 Genes GS182834: GO:0005623 cell Figure Label: GO:0005623 Species: Mus musculus  Data Points: 13187  Description: "The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope." [GOC:go_curators] Available to: Everyone (Tier I)
	Tier II Mouse 485 Genes GS84292: nicotine sensitivity (Published QTL, Chr 16) Figure Label: QTL for nicotine sensitivity on Chr16 at D16Mit131 (8.72 Mbp , Build 37) Species: Mus musculus  Data Points: 485  Description: nicotine sensitivity spans 0.00 - 33.72 Mbp (NCBI Build 37) on Chr16. This interval was obtained by using an interval width of 25 Mbp around the peak marker (Build 37, MGI, http://informatics.jax.org). Available to: Everyone (Tier II)
	Tier I Human GO 170 Genes GS196728: GO:0005788 endoplasmic reticulum lumen Figure Label: GO:0005788 Species: Homo sapiens  Data Points: 170  Description: "The volume enclosed by the membranes of the endoplasmic reticulum." [ISBN:0198547684] Available to: Everyone (Tier I)
	Tier II Human 23211 Genes GS235538: [MeSH] Protein Binding : D011485 Figure Label: Protein Binding Species: Homo sapiens  Data Points: 23211  Description: The process in which substances, either endogenous or exogenous, bind to proteins, peptides, enzymes, protein precursors, or allied compounds. Specific protein-binding measures are often used as assays in diagnostic assessments. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier II Human 8081 Genes GS245560: [MeSH] Ubiquitin : D025801 Figure Label: Ubiquitin Species: Homo sapiens  Data Points: 8081  Description: A highly conserved 76-amino acid peptide universally found in eukaryotic cells that functions as a marker for intracellular PROTEIN TRANSPORT and degradation. Ubiquitin becomes activated through a series of complicated steps and forms an isopeptide bond to lysine residues of specific proteins within the cell. These "ubiquitinated" proteins can be recognized and degraded by proteosomes or be transported to specific compartments within the cell. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human GO 12482 Genes GS199635: GO:0005622 intracellular Figure Label: GO:0005622 Species: Homo sapiens  Data Points: 12482  Description: "The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm." [ISBN:0198506732] Available to: Everyone (Tier I)
	Tier I Mouse 396 Genes GS135719: determination of interleukin 4 commitment 1 (Dice1, Published QTL Chr 16) Figure Label: QTL-Dice1-Mouse-Chr 16 Species: Mus musculus  Data Points: 396  Description: QTL associated with determination of interleukin 4 commitment 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (11616475) Available to: Everyone (Tier I)
	Tier I Human 269 Genes GS228035: MSigDB Geneset - V$COREBINDINGFACTOR_Q6 Figure Label: V$COREBINDINGFACTOR_Q6 Species: Homo sapiens  Data Points: 269  Description: V$COREBINDINGFACTOR_Q6 Genes with promoter regions [-2kb,2kb] around transcription start site containing the motif TGTGGTTW which matches annotation for CBFA2T2: core-binding factor, runt domain, alpha subunit 2; translocated to, 2 CBFA2T3: core-binding factor, runt domain, alpha subunit 2; translocated to, 3 c3 - Motif genesets based on conserved cis-regulatory motifs from a comparative analysis of the human, mouse, rat, and dog genomes. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse 339 Genes GS135974: wound healing/regeneration 11 (Heal11, Published QTL Chr 16) Figure Label: QTL-Heal11-Mouse-Chr 16 Species: Mus musculus  Data Points: 339  Description: QTL associated with wound healing/regeneration 11. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (7445973) Available to: Everyone (Tier I)
	Tier I Mouse 476 Genes GS135444: bone length and organs 10 (Bod10, Published QTL Chr 16) Figure Label: QTL-Bod10-Mouse-Chr 16 Species: Mus musculus  Data Points: 476  Description: QTL associated with bone length and organs 10. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (22956575) Available to: Everyone (Tier I)
	Tier II Human 58766 Genes GS243866: [MeSH] Laboratory Chemicals : D019995 Figure Label: Laboratory Chemicals Species: Homo sapiens  Data Points: 58766  Description: Chemicals necessary to perform experimental and/or investigative procedures and for the preparation of drugs and other chemicals. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 12202 Genes GS232685: PC Geneset - "Homo sapiens" pathway genes Figure Label: Homo sapiens Species: Homo sapiens  Data Points: 12202  Description: Pathway Commons (PC) Geneset. This geneset contains genes that participate in the "Homo sapiens" pathway. This set was automatically constructed using the PC API. The original source of this geneset is miRTarBase. gene2pc v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Human GO 14538 Genes GS199634: GO:0005623 cell Figure Label: GO:0005623 Species: Homo sapiens  Data Points: 14538  Description: "The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope." [GOC:go_curators] Available to: Everyone (Tier I)
	Tier I Human CTD 1593 Genes GS124695: arsenic trioxide interacting genes (MeSH:C006632) in CTD Figure Label: C006632 [CTD] Species: Homo sapiens  Data Points: 1593  Description: Genes that interact with the MeSH term 'arsenic trioxide' (C006632). Incorporates data from 193 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	Tier I Mouse 477 Genes GS135993: hemoglobin QTL 1 (Hgbq1, Published QTL Chr 16) Figure Label: QTL-Hgbq1-Mouse-Chr 16 Species: Mus musculus  Data Points: 477  Description: QTL associated with hemoglobin QTL 1. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (32704177) Available to: Everyone (Tier I)
	Tier I Mouse 315 Genes GS136792: TallyHo associated non-insulin dependent diabetes mellitus 3 (Tanidd3, Published QTL Chr 16) Figure Label: QTL-Tanidd3-Mouse-Chr 16 Species: Mus musculus  Data Points: 315  Description: QTL associated with TallyHo associated non-insulin dependent diabetes mellitus 3. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (6079819) Available to: Everyone (Tier I)
	Tier I Mouse 476 Genes GS136669: skin tumor susceptibility 9 (Skts9, Published QTL Chr 16) Figure Label: QTL-Skts9-Mouse-Chr 16 Species: Mus musculus  Data Points: 476  Description: QTL associated with skin tumor susceptibility 9. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (22956575) Available to: Everyone (Tier I)
	Tier II Human 58901 Genes GS243233: [MeSH] Specialty Uses of Chemicals : D020313 Figure Label: Specialty Uses of Chemicals Species: Homo sapiens  Data Points: 58901  Description: Uses of chemicals in a research, industrial, or household setting. This does not include PHARMACOLOGIC ACTIONS. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 197 Genes GS230012: MSigDB Geneset - GSE17974_0H_VS_12H_IN_VITRO_ACT_CD4_TCELL_DN Figure Label: GSE17974_0H_VS_12H_IN_VITRO_ACT_CD4_TCELL_DN Species: Homo sapiens  Data Points: 197  Description: GSE17974_0H_VS_12H_IN_VITRO_ACT_CD4_TCELL_DN Genes down-regulated in comparison of untreated CD4 [GeneID=920] T cells at 0 h versus the untreated cells at 12 h. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Human GO 6347 Genes GS201256: GO:0044422 organelle part Figure Label: GO:0044422 Species: Homo sapiens  Data Points: 6347  Description: "Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane." [GOC:jl] Available to: Everyone (Tier I)
	Tier I Human CTD 5081 Genes GS126276: pirinixic acid interacting genes (MeSH:C006253) in CTD Figure Label: C006253 [CTD] Species: Homo sapiens  Data Points: 5081  Description: Genes that interact with the MeSH term 'pirinixic acid' (C006253). Incorporates data from 171 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	Tier I Mouse 477 Genes GS136545: periosteal circumference 4 (Pstc4, Published QTL Chr 16) Figure Label: QTL-Pstc4-Mouse-Chr 16 Species: Mus musculus  Data Points: 477  Description: QTL associated with periosteal circumference 4. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (32704177) Available to: Everyone (Tier I)
	Tier I Mouse 486 Genes GS136185: lymphoproliferation modifier 5 (Lprm5, Published QTL Chr 16) Figure Label: QTL-Lprm5-Mouse-Chr 16 Species: Mus musculus  Data Points: 486  Description: QTL associated with lymphoproliferation modifier 5. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (29030158) Available to: Everyone (Tier I)
	Tier I Human 184 Genes GS230540: MSigDB Geneset - GSE14000_TRANSLATED_RNA_VS_MRNA_16H_LPS_DC_DN Figure Label: GSE14000_TRANSLATED_RNA_VS_MRNA_16H_LPS_DC_DN Species: Homo sapiens  Data Points: 184  Description: GSE14000_TRANSLATED_RNA_VS_MRNA_16H_LPS_DC_DN Genes down-regulated in comparison of polysome bound (translated) mRNA versus total mRNA 16 h after LPS (TLR4 agonist) stimulation. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 21049 Genes GS244735: [MeSH] Mutagenesis : D016296 Figure Label: Mutagenesis Species: Homo sapiens  Data Points: 21049  Description: Process of generating a genetic MUTATION. It may occur spontaneously or be induced by MUTAGENS. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human GO 9515 Genes GS209564: GO:0043231 intracellular membrane-bounded organelle Figure Label: GO:0043231 Species: Homo sapiens  Data Points: 9515  Description: "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane." [GOC:go_curators] Available to: Everyone (Tier I)
	Tier I Mouse 480 Genes GS135263: acute functional tolerance to ethanol QTL 2 (Afteq2, Published QTL Chr 16) Figure Label: QTL-Afteq2-Mouse-Chr 16 Species: Mus musculus  Data Points: 480  Description: QTL associated with acute functional tolerance to ethanol QTL 2. This interval was obtained by using a fixed interval width of 25 Mbp around the peak marker (23737062) Available to: Everyone (Tier I)
	Tier I Human 189 Genes GS228791: MSigDB Geneset - GSE14000_4H_VS_16H_LPS_DC_TRANSLATED_RNA_UP Figure Label: GSE14000_4H_VS_16H_LPS_DC_TRANSLATED_RNA_UP Species: Homo sapiens  Data Points: 189  Description: GSE14000_4H_VS_16H_LPS_DC_TRANSLATED_RNA_UP Genes up-regulated in comparison of polysome bound (translated) mRNA in dendritic cells (DC) at 4 h after LPS (TLR4 agonist) stimulation versus those at 16 h after the stimulation. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Human 188 Genes GS229744: MSigDB Geneset - GSE14000_TRANSLATED_RNA_VS_MRNA_DC_DN Figure Label: GSE14000_TRANSLATED_RNA_VS_MRNA_DC_DN Species: Homo sapiens  Data Points: 188  Description: GSE14000_TRANSLATED_RNA_VS_MRNA_DC_DN Genes down-regulated in comparison of polysome bound (translated) mRNA versus total mRNA in dendritic cells. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse 199 Genes GS227349: MSigDB Geneset - GSE30962_PRIMARY_VS_SECONDARY_ACUTE_LCMV_INF_CD8_TCELL_UP Figure Label: GSE30962_PRIMARY_VS_SECONDARY_ACUTE_LCMV_INF_CD8_TCELL_UP Species: Mus musculus  Data Points: 199  Description: GSE30962_PRIMARY_VS_SECONDARY_ACUTE_LCMV_INF_CD8_TCELL_UP Genes up-regulated in comparison of splenic primary CD8 effector T cells at day 8 post-acute infection versus splenic secondary CD8 effector T cells at day 8 post-acute infection. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Human 260 Genes GS231827: PC Geneset - "V$OSF2_Q6" pathway genes Figure Label: V$OSF2_Q6 Species: Homo sapiens  Data Points: 260  Description: Pathway Commons (PC) Geneset. This geneset contains genes that participate in the "V$OSF2_Q6" pathway. This set was automatically constructed using the PC API. The original source of this geneset is TRANSFAC. gene2pc v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier I Mouse 198 Genes GS228424: MSigDB Geneset - GSE27786_CD4_TCELL_VS_NKCELL_DN Figure Label: GSE27786_CD4_TCELL_VS_NKCELL_DN Species: Mus musculus  Data Points: 198  Description: GSE27786_CD4_TCELL_VS_NKCELL_DN Genes down-regulated in comparison of CD4 [GeneID=920] T cells versus NK cells. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 73356 Genes GS238415: [MeSH] Genome Components : D040481 Figure Label: Genome Components Species: Homo sapiens  Data Points: 73356  Description: The parts of a GENOME sequence that are involved with the different functions or properties of genomes as a whole as opposed to those of individual GENES. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human 198 Genes GS228373: MSigDB Geneset - GSE3982_MAST_CELL_VS_EFF_MEMORY_CD4_TCELL_UP Figure Label: GSE3982_MAST_CELL_VS_EFF_MEMORY_CD4_TCELL_UP Species: Homo sapiens  Data Points: 198  Description: GSE3982_MAST_CELL_VS_EFF_MEMORY_CD4_TCELL_UP Genes up-regulated in comparison of mast cells versus effector memory CD4 [GeneID=920] T cells. c7 - Genesets containing immunologic signatures defined directly from microarray gene expression data from immunologic studies. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
	Tier II Human 58262 Genes GS240750: [MeSH] Molecular Probes : D015335 Figure Label: Molecular Probes Species: Homo sapiens  Data Points: 58262  Description: A group of atoms or molecules attached to other molecules or cellular structures and used in studying the properties of these molecules and structures. Radioactive DNA or RNA sequences are used in MOLECULAR GENETICS to detect the presence of a complementary sequence by NUCLEIC ACID HYBRIDIZATION. Generated by gene2mesh v. 1.1.1 Available to: Everyone (Tier II)
	Tier I Human CTD 5732 Genes GS127240: Acetaminophen interacting genes (MeSH:D000082) in CTD Figure Label: D000082 [CTD] Species: Homo sapiens  Data Points: 5732  Description: Genes that interact with the MeSH term 'Acetaminophen' (D000082). Incorporates data from 193 publications curated by the Comparative Toxicogenomics Database (CTD). ODE Gene scores represent number of supporting publications per gene. Available to: Everyone (Tier I)
	Tier I Human 937 Genes GS230176: MSigDB Geneset - TTANTCA_UNKNOWN Figure Label: TTANTCA_UNKNOWN Species: Homo sapiens  Data Points: 937  Description: TTANTCA_UNKNOWN Genes with promoter regions [-2kb,2kb] around transcription start site containing motif TTANTCA. Motif does not match any known transcription factor c3 - Motif genesets based on conserved cis-regulatory motifs from a comparative analysis of the human, mouse, rat, and dog genomes. Molecular Signatures Database (MSigDB) Geneset. This geneset was imported from one of the MSigDB collections. gene2msig v. 0.1.0 Last updated 2015.08.31 Available to: Everyone (Tier I)
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